RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 PNKPQ96T60 521 aa12.67□□□□□ -0.38
HDAC6-201ENST00000334136 TRIM7Q9C029 511 aa12.67□□□□□ -0.38
HDAC6-201ENST00000334136 SYNCQ9H7C4 482 aa12.67□□□□□ -0.38
HDAC6-201ENST00000334136 RPF1Q9H9Y2 349 aaKnown RBP12.67□□□□□ -0.38
HDAC6-201ENST00000334136 CEP83Q9Y592 693 aa12.67□□□□□ -0.38
HDAC6-201ENST00000334136 NUB1Q9Y5A7 615 aa12.67□□□□□ -0.38
HDAC6-201ENST00000334136 DCDC2CA8MYV0 355 aa12.67□□□□□ -0.38
HDAC6-201ENST00000334136 LDHAP00338 332 aaKnown RBP12.67□□□□□ -0.38
HDAC6-201ENST00000334136 LGALS2P05162 132 aa12.67□□□□□ -0.38
HDAC6-201ENST00000334136 PLS3P13797 630 aa12.67□□□□□ -0.38
HDAC6-201ENST00000334136 SARNPP82979 210 aaKnown RBP12.67□□□□□ -0.38
HDAC6-201ENST00000334136 KCNB1Q14721 858 aa12.67□□□□□ -0.38
HDAC6-201ENST00000334136 SPATS2Q86XZ4 545 aaKnown RBP12.67□□□□□ -0.38
HDAC6-201ENST00000334136 REPS2Q8NFH8 660 aa12.67□□□□□ -0.38
HDAC6-201ENST00000334136 NUCKS1Q9H1E3 243 aaKnown RBP12.67□□□□□ -0.38
HDAC6-201ENST00000334136 TMEM51Q9NW97 253 aa12.67□□□□□ -0.38
HDAC6-201ENST00000334136 COL4A5P29400 1685 aa12.67□□□□□ -0.38
HDAC6-201ENST00000334136 PRKCBP05771 671 aa12.66□□□□□ -0.38
HDAC6-201ENST00000334136 H2AFZP0C0S5 128 aa12.66□□□□□ -0.38
HDAC6-201ENST00000334136 ALDH3A1P30838 453 aa12.66□□□□□ -0.38
HDAC6-201ENST00000334136 CLK2P49760 499 aaKnown RBP12.66□□□□□ -0.38
HDAC6-201ENST00000334136 PSMC6P62333 389 aa12.66□□□□□ -0.38
HDAC6-201ENST00000334136 H2AFVQ71UI9 128 aa12.66□□□□□ -0.38
HDAC6-201ENST00000334136 CCDC60Q8IWA6 550 aaPredicted RBP12.66□□□□□ -0.38
HDAC6-201ENST00000334136 ARHGEF2Q92974 986 aaKnown RBP12.66□□□□□ -0.38
HDAC6-201ENST00000334136 ZNF446Q9NWS9 450 aa12.66□□□□□ -0.38
HDAC6-201ENST00000334136 NFASCO94856 1347 aa12.66□□□□□ -0.38
HDAC6-201ENST00000334136 STAT1P42224 750 aa12.66□□□□□ -0.38
HDAC6-201ENST00000334136 PSEN2P49810 448 aa12.66□□□□□ -0.38
HDAC6-201ENST00000334136 ZKSCAN8Q15776 578 aaPredicted RBP12.66□□□□□ -0.38
HDAC6-201ENST00000334136 CCDC63Q8NA47 563 aa12.66□□□□□ -0.38
HDAC6-201ENST00000334136 XXYLT1Q8NBI6 393 aa12.66□□□□□ -0.38
HDAC6-201ENST00000334136 RUSC1Q9BVN2 902 aa12.66□□□□□ -0.38
HDAC6-201ENST00000334136 MAST2Q6P0Q8 1798 aa12.66□□□□□ -0.38
HDAC6-201ENST00000334136 WNT7AO00755 349 aa12.66□□□□□ -0.38
HDAC6-201ENST00000334136 P4HA1P13674 534 aa12.66□□□□□ -0.38
HDAC6-201ENST00000334136 HSPA6P17066 643 aa12.66□□□□□ -0.38
HDAC6-201ENST00000334136 ZNF131P52739 623 aa12.66□□□□□ -0.38
HDAC6-201ENST00000334136 DHX9Q08211 1270 aaKnown RBP12.66□□□□□ -0.38
HDAC6-201ENST00000334136 SEMA3FQ13275 785 aa12.66□□□□□ -0.38
HDAC6-201ENST00000334136 MFSD10Q14728 455 aa12.66□□□□□ -0.38
HDAC6-201ENST00000334136 TAOK1Q7L7X3 1001 aa12.66□□□□□ -0.38
HDAC6-201ENST00000334136 ETNPPLQ8TBG4 499 aa12.66□□□□□ -0.38
HDAC6-201ENST00000334136 DEFB118Q96PH6 123 aa12.66□□□□□ -0.38
HDAC6-201ENST00000334136 RAB17Q9H0T7 212 aa12.66□□□□□ -0.38
HDAC6-201ENST00000334136 NDST4Q9H3R1 872 aa12.66□□□□□ -0.38
HDAC6-201ENST00000334136 GPRC5CQ9NQ84 441 aa12.66□□□□□ -0.38
HDAC6-201ENST00000334136 H3BQF6 201 aa12.66□□□□□ -0.38
HDAC6-201ENST00000334136 GNRH1P01148 92 aa12.66□□□□□ -0.38
HDAC6-201ENST00000334136 THPOP40225 353 aa12.66□□□□□ -0.38
HDAC6-201ENST00000334136 PLTPP55058 493 aa12.66□□□□□ -0.38
HDAC6-201ENST00000334136 ITGB3BPQ13352 177 aaPredicted RBP12.66□□□□□ -0.38
HDAC6-201ENST00000334136 NPY5RQ15761 445 aa12.66□□□□□ -0.38
HDAC6-201ENST00000334136 CCL14Q16627 93 aa12.66□□□□□ -0.38
HDAC6-201ENST00000334136 FAM133BQ5BKY9 247 aaKnown RBP12.66□□□□□ -0.38
HDAC6-201ENST00000334136 HHIPL1Q96JK4 782 aa12.66□□□□□ -0.38
HDAC6-201ENST00000334136 TOPORSQ9NS56 1045 aaPredicted RBP12.66□□□□□ -0.38
HDAC6-201ENST00000334136 TYW1Q9NV66 732 aaKnown RBP12.66□□□□□ -0.38
HDAC6-201ENST00000334136 ZBBXA8MT70 800 aa12.65□□□□□ -0.38
HDAC6-201ENST00000334136 LGALS16A8MUM7 142 aa12.65□□□□□ -0.38
HDAC6-201ENST00000334136 RPS6KA5O75582 802 aa12.65□□□□□ -0.38
HDAC6-201ENST00000334136 STX2P32856 288 aa12.65□□□□□ -0.38
HDAC6-201ENST00000334136 RARRES1P49788 294 aa12.65□□□□□ -0.38
HDAC6-201ENST00000334136 EMBQ6PCB8 327 aa12.65□□□□□ -0.38
HDAC6-201ENST00000334136 ZNF365Q70YC5 407 aa12.65□□□□□ -0.38
HDAC6-201ENST00000334136 FMNL3Q8IVF7 1028 aa12.65□□□□□ -0.38
HDAC6-201ENST00000334136 UBL4BQ8N7F7 174 aa12.65□□□□□ -0.38
HDAC6-201ENST00000334136 ANKRD36BP1Q96IX9 119 aa12.65□□□□□ -0.38
HDAC6-201ENST00000334136 PTPN18Q99952 460 aa12.65□□□□□ -0.38
HDAC6-201ENST00000334136 INTS9Q9NV88 658 aaKnown RBP12.65□□□□□ -0.38
HDAC6-201ENST00000334136 PIN4Q9Y237 131 aaKnown RBP12.65□□□□□ -0.38
HDAC6-201ENST00000334136 NR3C1P04150 777 aa12.65□□□□□ -0.38
HDAC6-201ENST00000334136 DPYDQ12882 1025 aa12.65□□□□□ -0.38
HDAC6-201ENST00000334136 GRIK4Q16099 956 aa12.65□□□□□ -0.38
HDAC6-201ENST00000334136 HSDL1Q3SXM5 330 aa12.65□□□□□ -0.38
HDAC6-201ENST00000334136 PRPF31Q8WWY3 499 aaKnown RBP12.65□□□□□ -0.38
HDAC6-201ENST00000334136 ZBED2Q9BTP6 218 aa12.65□□□□□ -0.38
HDAC6-201ENST00000334136 LRRC1Q9BTT6 524 aa12.65□□□□□ -0.38
HDAC6-201ENST00000334136 A0A1B0GTH6 734 aa12.65□□□□□ -0.38
HDAC6-201ENST00000334136 HOXC6P09630 235 aa12.65□□□□□ -0.38
HDAC6-201ENST00000334136 ATF7P17544 494 aaPredicted RBP12.65□□□□□ -0.38
HDAC6-201ENST00000334136 GUCY1A3Q02108 690 aa12.65□□□□□ -0.38
HDAC6-201ENST00000334136 APBA1Q02410 837 aa12.65□□□□□ -0.38
HDAC6-201ENST00000334136 STK4Q13043 487 aa12.65□□□□□ -0.38
HDAC6-201ENST00000334136 SURF1Q15526 300 aa12.65□□□□□ -0.38
HDAC6-201ENST00000334136 CAPN12Q6ZSI9 719 aa12.65□□□□□ -0.38
HDAC6-201ENST00000334136 SYCE1Q8N0S2 351 aa12.65□□□□□ -0.38
HDAC6-201ENST00000334136 TRAPPC12Q8WVT3 735 aa12.65□□□□□ -0.38
HDAC6-201ENST00000334136 KIAA1586Q9HCI6 787 aa12.65□□□□□ -0.38
HDAC6-201ENST00000334136 SMARCAL1Q9NZC9 954 aa12.65□□□□□ -0.38
HDAC6-201ENST00000334136 PACSIN2Q9UNF0 486 aaPredicted RBP12.65□□□□□ -0.38
HDAC6-201ENST00000334136 HPSEQ9Y251 543 aa12.65□□□□□ -0.38
HDAC6-201ENST00000334136 TMEM150BA6NC51 233 aa12.64□□□□□ -0.39
HDAC6-201ENST00000334136 CD19P15391 556 aa12.64□□□□□ -0.39
HDAC6-201ENST00000334136 TM4SF4P48230 202 aa12.64□□□□□ -0.39
HDAC6-201ENST00000334136 NR1I3Q14994 352 aa12.64□□□□□ -0.39
HDAC6-201ENST00000334136 MAN2A1Q16706 1144 aa12.64□□□□□ -0.39
HDAC6-201ENST00000334136 ALS2CLQ60I27 953 aa12.64□□□□□ -0.39
HDAC6-201ENST00000334136 PNMA5Q96PV4 448 aa12.64□□□□□ -0.39
HDAC6-201ENST00000334136 FAM213AQ9BRX8 229 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms