RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 FAM212AQ96EL1 285 aa18■□□□□ 0.47
SHOX-201ENST00000334060 PDE11AQ9HCR9 933 aa18■□□□□ 0.47
SHOX-201ENST00000334060 FAM105AQ9NUU6 356 aa18■□□□□ 0.47
SHOX-201ENST00000334060 CXXC1Q9P0U4 656 aaPredicted RBP18■□□□□ 0.47
SHOX-201ENST00000334060 CPSF3Q9UKF6 684 aaKnown RBP18■□□□□ 0.47
SHOX-201ENST00000334060 PCDHB2Q9Y5E7 798 aa18■□□□□ 0.47
SHOX-201ENST00000334060 FGFR1P11362 822 aa17.99■□□□□ 0.47
SHOX-201ENST00000334060 GUCY2FP51841 1108 aa17.99■□□□□ 0.47
SHOX-201ENST00000334060 DEFB103AP81534 67 aa17.99■□□□□ 0.47
SHOX-201ENST00000334060 C12orf56Q8IXR9 622 aa17.99■□□□□ 0.47
SHOX-201ENST00000334060 XXYLT1Q8NBI6 393 aa17.99■□□□□ 0.47
SHOX-201ENST00000334060 CCDC127Q96BQ5 260 aa17.99■□□□□ 0.47
SHOX-201ENST00000334060 TRIM44Q96DX7 344 aaPredicted RBP17.99■□□□□ 0.47
SHOX-201ENST00000334060 TSG101Q99816 390 aa17.99■□□□□ 0.47
SHOX-201ENST00000334060 MMRN2Q9H8L6 949 aa17.99■□□□□ 0.47
SHOX-201ENST00000334060 TAB2Q9NYJ8 693 aa17.99■□□□□ 0.47
SHOX-201ENST00000334060 TRIP11Q15643 1979 aa17.99■□□□□ 0.47
SHOX-201ENST00000334060 BICDL2A1A5D9 508 aa17.99■□□□□ 0.47
SHOX-201ENST00000334060 ENPP3O14638 875 aa17.99■□□□□ 0.47
SHOX-201ENST00000334060 GARTP22102 1010 aa17.99■□□□□ 0.47
SHOX-201ENST00000334060 SLC10A6Q3KNW5 377 aa17.99■□□□□ 0.47
SHOX-201ENST00000334060 AGMOQ6ZNB7 445 aa17.99■□□□□ 0.47
SHOX-201ENST00000334060 GPD1LQ8N335 351 aa17.99■□□□□ 0.47
SHOX-201ENST00000334060 FBXL18Q96ME1 805 aa17.99■□□□□ 0.47
SHOX-201ENST00000334060 ZMAT2Q96NC0 199 aaKnown RBP17.99■□□□□ 0.47
SHOX-201ENST00000334060 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.99■□□□□ 0.47
SHOX-201ENST00000334060 MIOSQ9NXC5 875 aa17.99■□□□□ 0.47
SHOX-201ENST00000334060 CHD7Q9P2D1 2997 aa17.98■□□□□ 0.47
SHOX-201ENST00000334060 ANK1P16157 1881 aa17.98■□□□□ 0.47
SHOX-201ENST00000334060 PTPRSQ13332 1948 aa17.98■□□□□ 0.47
SHOX-201ENST00000334060 BECN2A8MW95 431 aa17.98■□□□□ 0.47
SHOX-201ENST00000334060 C9IYK1 514 aa17.98■□□□□ 0.47
SHOX-201ENST00000334060 IKBKBO14920 756 aa17.98■□□□□ 0.47
SHOX-201ENST00000334060 N4BP3O15049 544 aa17.98■□□□□ 0.47
SHOX-201ENST00000334060 OGTO15294 1046 aa17.98■□□□□ 0.47
SHOX-201ENST00000334060 B4GALT3O60512 393 aa17.98■□□□□ 0.47
SHOX-201ENST00000334060 RECQL4O94761 1208 aa17.98■□□□□ 0.47
SHOX-201ENST00000334060 KIF20AO95235 890 aa17.98■□□□□ 0.47
SHOX-201ENST00000334060 APBA1Q02410 837 aa17.98■□□□□ 0.47
SHOX-201ENST00000334060 TPD52L1Q16890 204 aaPredicted RBP17.98■□□□□ 0.47
SHOX-201ENST00000334060 SLC9A9Q8IVB4 645 aa17.98■□□□□ 0.47
SHOX-201ENST00000334060 INTS13Q9NVM9 706 aa17.98■□□□□ 0.47
SHOX-201ENST00000334060 KCNG1Q9UIX4 513 aa17.98■□□□□ 0.47
SHOX-201ENST00000334060 KCNJ18B7U540 433 aa17.97■□□□□ 0.47
SHOX-201ENST00000334060 KCNJ12Q14500 433 aa17.97■□□□□ 0.47
SHOX-201ENST00000334060 KRT31Q15323 416 aa17.97■□□□□ 0.47
SHOX-201ENST00000334060 FAM117BQ6P1L5 589 aa17.97■□□□□ 0.47
SHOX-201ENST00000334060 ZNF365Q70YC5 407 aa17.97■□□□□ 0.47
SHOX-201ENST00000334060 EFCAB13Q8IY85 973 aa17.97■□□□□ 0.47
SHOX-201ENST00000334060 FAM186BQ8IYM0 893 aa17.97■□□□□ 0.47
SHOX-201ENST00000334060 GSTCDQ8NEC7 633 aa17.97■□□□□ 0.47
SHOX-201ENST00000334060 OR5B17Q8NGF7 314 aa17.97■□□□□ 0.47
SHOX-201ENST00000334060 ZNF516Q92618 1163 aa17.97■□□□□ 0.47
SHOX-201ENST00000334060 RABGGTAQ92696 567 aa17.97■□□□□ 0.47
SHOX-201ENST00000334060 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.97■□□□□ 0.47
SHOX-201ENST00000334060 NAT10Q9H0A0 1025 aaKnown RBP17.97■□□□□ 0.47
SHOX-201ENST00000334060 MICAL3Q7RTP6 2002 aa17.97■□□□□ 0.47
SHOX-201ENST00000334060 CETN3O15182 167 aa17.97■□□□□ 0.47
SHOX-201ENST00000334060 EXTL3O43909 919 aa17.97■□□□□ 0.47
SHOX-201ENST00000334060 NFICP08651 508 aa17.97■□□□□ 0.47
SHOX-201ENST00000334060 MCF2P10911 925 aa17.97■□□□□ 0.47
SHOX-201ENST00000334060 MIIPQ5JXC2 388 aa17.97■□□□□ 0.47
SHOX-201ENST00000334060 HTATIP2Q9BUP3 242 aa17.97■□□□□ 0.47
SHOX-201ENST00000334060 TRIM6Q9C030 488 aaPredicted RBP17.97■□□□□ 0.47
SHOX-201ENST00000334060 TSPYL2Q9H2G4 693 aaPredicted RBP17.97■□□□□ 0.47
SHOX-201ENST00000334060 GRPEL1Q9HAV7 217 aa17.97■□□□□ 0.47
SHOX-201ENST00000334060 RGS18Q9NS28 235 aa17.97■□□□□ 0.47
SHOX-201ENST00000334060 RBAKQ9NYW8 714 aaPredicted RBP17.97■□□□□ 0.47
SHOX-201ENST00000334060 PARP2Q9UGN5 583 aa17.97■□□□□ 0.47
SHOX-201ENST00000334060 SQORQ9Y6N5 450 aa17.97■□□□□ 0.47
SHOX-201ENST00000334060 CHD9Q3L8U1 2897 aa17.96■□□□□ 0.47
SHOX-201ENST00000334060 COL4A6Q14031 1691 aa17.96■□□□□ 0.47
SHOX-201ENST00000334060 LRRIQ3A6PVS8 624 aaPredicted RBP17.96■□□□□ 0.47
SHOX-201ENST00000334060 LACTBL1A8MY62 500 aa17.96■□□□□ 0.47
SHOX-201ENST00000334060 UPP2O95045 317 aa17.96■□□□□ 0.47
SHOX-201ENST00000334060 RPLP2P05387 115 aaKnown RBP17.96■□□□□ 0.47
SHOX-201ENST00000334060 DLATP10515 647 aaKnown RBP17.96■□□□□ 0.47
SHOX-201ENST00000334060 MLH1P40692 756 aa17.96■□□□□ 0.47
SHOX-201ENST00000334060 CYP24A1Q07973 514 aa17.96■□□□□ 0.47
SHOX-201ENST00000334060 PPP3CAQ08209 521 aa17.96■□□□□ 0.47
SHOX-201ENST00000334060 NFIL3Q16649 462 aa17.96■□□□□ 0.47
SHOX-201ENST00000334060 CCDC40Q4G0X9 1142 aa17.96■□□□□ 0.47
SHOX-201ENST00000334060 TCP11X2Q5H9J9 407 aa17.96■□□□□ 0.47
SHOX-201ENST00000334060 DCAF17Q5H9S7 520 aaPredicted RBP17.96■□□□□ 0.47
SHOX-201ENST00000334060 C9orf50Q5SZB4 431 aa17.96■□□□□ 0.47
SHOX-201ENST00000334060 ZNF598Q86UK7 904 aaKnown RBP17.96■□□□□ 0.47
SHOX-201ENST00000334060 ECHDC2Q86YB7 292 aa17.96■□□□□ 0.47
SHOX-201ENST00000334060 USP38Q8NB14 1042 aa17.96■□□□□ 0.47
SHOX-201ENST00000334060 SEPT8Q92599 483 aa17.96■□□□□ 0.47
SHOX-201ENST00000334060 VPS16Q9H269 839 aa17.96■□□□□ 0.47
SHOX-201ENST00000334060 GOLGA2P5Q9HBQ8 144 aa17.96■□□□□ 0.47
SHOX-201ENST00000334060 A0A0U1RQF3 1178 aa17.95■□□□□ 0.46
SHOX-201ENST00000334060 ZSCAN20P17040 1043 aaPredicted RBP17.95■□□□□ 0.46
SHOX-201ENST00000334060 AXLP30530 894 aa17.95■□□□□ 0.46
SHOX-201ENST00000334060 PPP1R2P41236 205 aa17.95■□□□□ 0.46
SHOX-201ENST00000334060 CBWD6Q4V339 395 aa17.95■□□□□ 0.46
SHOX-201ENST00000334060 CBWD3Q5JTY5 395 aa17.95■□□□□ 0.46
SHOX-201ENST00000334060 CLLU1OSQ5K130 101 aa17.95■□□□□ 0.46
SHOX-201ENST00000334060 CBWD5Q5RIA9 395 aa17.95■□□□□ 0.46
SHOX-201ENST00000334060 SLFN12LQ6IEE8 588 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms