RNA–Protein interactions for RNA: ENST00000331728.8

LIMK2-201, Transcript of LIM domain kinase 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIMK2, Length 3,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-201ENST00000331728 SHROOM1Q2M3G4 852 aaPredicted RBP9.33□□□□□ -0.92
LIMK2-201ENST00000331728 LIN9Q5TKA1 542 aa9.33□□□□□ -0.92
LIMK2-201ENST00000331728 PHLDB3Q6NSJ2 640 aa9.33□□□□□ -0.92
LIMK2-201ENST00000331728 DPY19L2P1Q6NXN4 242 aa9.33□□□□□ -0.92
LIMK2-201ENST00000331728 FAM47EQ6ZV65 393 aa9.33□□□□□ -0.92
LIMK2-201ENST00000331728 ARHGEF19Q8IW93 802 aa9.33□□□□□ -0.92
LIMK2-201ENST00000331728 SLC30A5Q8TAD4 765 aa9.33□□□□□ -0.92
LIMK2-201ENST00000331728 SPDL1Q96EA4 605 aa9.33□□□□□ -0.92
LIMK2-201ENST00000331728 SNF8Q96H20 258 aa9.33□□□□□ -0.92
LIMK2-201ENST00000331728 HSPBP1Q9NZL4 362 aa9.33□□□□□ -0.92
LIMK2-201ENST00000331728 COG5Q9UP83 839 aa9.33□□□□□ -0.92
LIMK2-201ENST00000331728 AGAP1Q9UPQ3 857 aa9.33□□□□□ -0.92
LIMK2-201ENST00000331728 DDTLA6NHG4 134 aaPredicted RBP9.33□□□□□ -0.92
LIMK2-201ENST00000331728 ATP2A1O14983 1001 aa9.33□□□□□ -0.92
LIMK2-201ENST00000331728 SKAP2O75563 359 aaPredicted RBP9.33□□□□□ -0.92
LIMK2-201ENST00000331728 CIITAP33076 1130 aa9.33□□□□□ -0.92
LIMK2-201ENST00000331728 PEX3P56589 373 aa9.33□□□□□ -0.92
LIMK2-201ENST00000331728 PLCB3Q01970 1234 aa9.33□□□□□ -0.92
LIMK2-201ENST00000331728 XKR9Q5GH70 373 aa9.33□□□□□ -0.92
LIMK2-201ENST00000331728 NAIF1Q69YI7 327 aaPredicted RBP9.33□□□□□ -0.92
LIMK2-201ENST00000331728 ZDHHC24Q6UX98 284 aa9.33□□□□□ -0.92
LIMK2-201ENST00000331728 PPP1R21Q6ZMI0 780 aa9.33□□□□□ -0.92
LIMK2-201ENST00000331728 CAPN12Q6ZSI9 719 aa9.33□□□□□ -0.92
LIMK2-201ENST00000331728 CEP128Q6ZU80 1094 aa9.33□□□□□ -0.92
LIMK2-201ENST00000331728 KIF2BQ8N4N8 673 aa9.33□□□□□ -0.92
LIMK2-201ENST00000331728 MICAL1Q8TDZ2 1067 aa9.33□□□□□ -0.92
LIMK2-201ENST00000331728 KCND2Q9NZV8 630 aa9.33□□□□□ -0.92
LIMK2-201ENST00000331728 UVRAGQ9P2Y5 699 aa9.33□□□□□ -0.92
LIMK2-201ENST00000331728 ARL2BPQ9Y2Y0 163 aa9.33□□□□□ -0.92
LIMK2-201ENST00000331728 KIF3CO14782 793 aa9.32□□□□□ -0.92
LIMK2-201ENST00000331728 CTNNA2P26232 953 aa9.32□□□□□ -0.92
LIMK2-201ENST00000331728 CNGA2Q16280 664 aa9.32□□□□□ -0.92
LIMK2-201ENST00000331728 KYNUQ16719 465 aa9.32□□□□□ -0.92
LIMK2-201ENST00000331728 WDR44Q5JSH3 913 aa9.32□□□□□ -0.92
LIMK2-201ENST00000331728 CHADLQ6NUI6 762 aa9.32□□□□□ -0.92
LIMK2-201ENST00000331728 BZW1Q7L1Q6 419 aaKnown RBP9.32□□□□□ -0.92
LIMK2-201ENST00000331728 MIGA2Q7L4E1 593 aa9.32□□□□□ -0.92
LIMK2-201ENST00000331728 OTOP1Q7RTM1 612 aa9.32□□□□□ -0.92
LIMK2-201ENST00000331728 AMIGO3Q86WK7 504 aa9.32□□□□□ -0.92
LIMK2-201ENST00000331728 ANKRD35Q8N283 1001 aa9.32□□□□□ -0.92
LIMK2-201ENST00000331728 BBOF1Q8ND07 529 aa9.32□□□□□ -0.92
LIMK2-201ENST00000331728 L3MBTL3Q96JM7 780 aaPredicted RBP9.32□□□□□ -0.92
LIMK2-201ENST00000331728 RAB3IPQ96QF0 476 aaPredicted RBP9.32□□□□□ -0.92
LIMK2-201ENST00000331728 SH2D3AQ9BRG2 576 aa9.32□□□□□ -0.92
LIMK2-201ENST00000331728 CBWD1Q9BRT8 395 aa9.32□□□□□ -0.92
LIMK2-201ENST00000331728 DDX23Q9BUQ8 820 aaKnown RBP9.32□□□□□ -0.92
LIMK2-201ENST00000331728 HEMGNQ9BXL5 484 aa9.32□□□□□ -0.92
LIMK2-201ENST00000331728 C1orf112Q9NSG2 853 aa9.32□□□□□ -0.92
LIMK2-201ENST00000331728 PCYOX1Q9UHG3 505 aa9.32□□□□□ -0.92
LIMK2-201ENST00000331728 SLC16A4O15374 487 aa9.32□□□□□ -0.92
LIMK2-201ENST00000331728 RARAP10276 462 aa9.32□□□□□ -0.92
LIMK2-201ENST00000331728 ALDH1B1P30837 517 aa9.32□□□□□ -0.92
LIMK2-201ENST00000331728 NSFP46459 744 aaKnown RBP9.32□□□□□ -0.92
LIMK2-201ENST00000331728 COPS2P61201 443 aa9.32□□□□□ -0.92
LIMK2-201ENST00000331728 AUHQ13825 339 aaKnown RBP9.32□□□□□ -0.92
LIMK2-201ENST00000331728 APOBEC3HQ6NTF7 200 aaKnown RBP9.32□□□□□ -0.92
LIMK2-201ENST00000331728 ARMC2Q8NEN0 867 aa9.32□□□□□ -0.92
LIMK2-201ENST00000331728 SAAL1Q96ER3 474 aa9.32□□□□□ -0.92
LIMK2-201ENST00000331728 TMEM109Q9BVC6 243 aa9.32□□□□□ -0.92
LIMK2-201ENST00000331728 MTFR1LQ9H019 292 aa9.32□□□□□ -0.92
LIMK2-201ENST00000331728 UNC45AQ9H3U1 944 aa9.32□□□□□ -0.92
LIMK2-201ENST00000331728 VPS37BQ9H9H4 285 aa9.32□□□□□ -0.92
LIMK2-201ENST00000331728 GTF3C4Q9UKN8 822 aa9.32□□□□□ -0.92
LIMK2-201ENST00000331728 RPTORQ8N122 1335 aa9.32□□□□□ -0.92
LIMK2-201ENST00000331728 POC1B-GALNT4F8VUJ3 575 aa9.32□□□□□ -0.92
LIMK2-201ENST00000331728 P4HA2O15460 535 aa9.32□□□□□ -0.92
LIMK2-201ENST00000331728 HHATQ5VTY9 493 aa9.32□□□□□ -0.92
LIMK2-201ENST00000331728 HAUS6Q7Z4H7 955 aa9.32□□□□□ -0.92
LIMK2-201ENST00000331728 CPXCR1Q8N123 301 aa9.32□□□□□ -0.92
LIMK2-201ENST00000331728 KAT5Q92993 513 aa9.32□□□□□ -0.92
LIMK2-201ENST00000331728 MKL1Q969V6 931 aa9.32□□□□□ -0.92
LIMK2-201ENST00000331728 LENG9Q96B70 501 aa9.32□□□□□ -0.92
LIMK2-201ENST00000331728 FNBP1Q96RU3 617 aa9.32□□□□□ -0.92
LIMK2-201ENST00000331728 PITPNM3Q9BZ71 974 aa9.32□□□□□ -0.92
LIMK2-201ENST00000331728 TDRD3Q9H7E2 651 aaKnown RBP9.32□□□□□ -0.92
LIMK2-201ENST00000331728 USP21Q9UK80 565 aa9.32□□□□□ -0.92
LIMK2-201ENST00000331728 RASA4BC9J798 803 aa9.31□□□□□ -0.92
LIMK2-201ENST00000331728 RASA4O43374 803 aa9.31□□□□□ -0.92
LIMK2-201ENST00000331728 MYCLP12524 364 aaPredicted RBP9.31□□□□□ -0.92
LIMK2-201ENST00000331728 GYS1P13807 737 aa9.31□□□□□ -0.92
LIMK2-201ENST00000331728 ITIH2P19823 946 aa9.31□□□□□ -0.92
LIMK2-201ENST00000331728 KRT39Q6A163 491 aa9.31□□□□□ -0.92
LIMK2-201ENST00000331728 CAPRIN2Q6IMN6 1127 aaKnown RBP9.31□□□□□ -0.92
LIMK2-201ENST00000331728 ATG4AQ8WYN0 398 aa9.31□□□□□ -0.92
LIMK2-201ENST00000331728 POMGNT1Q8WZA1 660 aa9.31□□□□□ -0.92
LIMK2-201ENST00000331728 GMCL1Q96IK5 515 aa9.31□□□□□ -0.92
LIMK2-201ENST00000331728 SERPINB12Q96P63 405 aa9.31□□□□□ -0.92
LIMK2-201ENST00000331728 HSD17B14Q9BPX1 270 aa9.31□□□□□ -0.92
LIMK2-201ENST00000331728 HOMER2Q9NSB8 354 aa9.31□□□□□ -0.92
LIMK2-201ENST00000331728 GRHL1Q9NZI5 618 aa9.31□□□□□ -0.92
LIMK2-201ENST00000331728 EXOC1LA0A1B0GW35 172 aa9.31□□□□□ -0.92
LIMK2-201ENST00000331728 TISP43B9A030 160 aa9.31□□□□□ -0.92
LIMK2-201ENST00000331728 TCP10L2B9ZVM9 353 aa9.31□□□□□ -0.92
LIMK2-201ENST00000331728 TOM1O60784 492 aa9.31□□□□□ -0.92
LIMK2-201ENST00000331728 LUC7L3O95232 432 aaKnown RBP9.31□□□□□ -0.92
LIMK2-201ENST00000331728 GZMAP12544 262 aa9.31□□□□□ -0.92
LIMK2-201ENST00000331728 ALADP13716 330 aa9.31□□□□□ -0.92
LIMK2-201ENST00000331728 ITGA8P53708 1063 aa9.31□□□□□ -0.92
LIMK2-201ENST00000331728 DLG4P78352 724 aa9.31□□□□□ -0.92
LIMK2-201ENST00000331728 CAV1Q03135 178 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms