RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 FOXP1Q9H334 677 aaPredicted RBP7.09□□□□□ -1.27
SMG1-201ENST00000330588 SUGCTQ9HAC7 445 aa7.09□□□□□ -1.27
SMG1-201ENST00000330588 CHST12Q9NRB3 414 aa7.09□□□□□ -1.27
SMG1-201ENST00000330588 RGS18Q9NS28 235 aa7.09□□□□□ -1.27
SMG1-201ENST00000330588 VAV3Q9UKW4 847 aa7.09□□□□□ -1.27
SMG1-201ENST00000330588 KCNJ14Q9UNX9 436 aa7.09□□□□□ -1.27
SMG1-201ENST00000330588 ZNF232Q9UNY5 417 aa7.09□□□□□ -1.27
SMG1-201ENST00000330588 KIF3AQ9Y496 699 aa7.09□□□□□ -1.27
SMG1-201ENST00000330588 C9IYK1 514 aa7.08□□□□□ -1.28
SMG1-201ENST00000330588 M0R082 166 aa7.08□□□□□ -1.28
SMG1-201ENST00000330588 DLL1O00548 723 aa7.08□□□□□ -1.28
SMG1-201ENST00000330588 CCNT1O60563 726 aaKnown RBP7.08□□□□□ -1.28
SMG1-201ENST00000330588 MAFO75444 373 aaPredicted RBP7.08□□□□□ -1.28
SMG1-201ENST00000330588 XRCC6P12956 609 aaKnown RBP eCLIP7.08□□□□□ -1.28
SMG1-201ENST00000330588 EIF4BP23588 611 aaKnown RBP7.08□□□□□ -1.28
SMG1-201ENST00000330588 BMPR1AP36894 532 aa7.08□□□□□ -1.28
SMG1-201ENST00000330588 QARSP47897 775 aaKnown RBP7.08□□□□□ -1.28
SMG1-201ENST00000330588 TRAPPC10P48553 1259 aa7.08□□□□□ -1.28
SMG1-201ENST00000330588 PSMA6P60900 246 aaKnown RBP7.08□□□□□ -1.28
SMG1-201ENST00000330588 POU5F1BQ06416 359 aa7.08□□□□□ -1.28
SMG1-201ENST00000330588 SAFBQ15424 915 aaKnown RBP eCLIP7.08□□□□□ -1.28
SMG1-201ENST00000330588 UGCGQ16739 394 aa7.08□□□□□ -1.28
SMG1-201ENST00000330588 EPC2Q52LR7 807 aa7.08□□□□□ -1.28
SMG1-201ENST00000330588 KRT40Q6A162 431 aa7.08□□□□□ -1.28
SMG1-201ENST00000330588 EFCAB12Q6NXP0 572 aa7.08□□□□□ -1.28
SMG1-201ENST00000330588 MICALL1Q8N3F8 863 aa7.08□□□□□ -1.28
SMG1-201ENST00000330588 ZNF417Q8TAU3 575 aa7.08□□□□□ -1.28
SMG1-201ENST00000330588 ARNTL2Q8WYA1 636 aa7.08□□□□□ -1.28
SMG1-201ENST00000330588 HAS1Q92839 578 aa7.08□□□□□ -1.28
SMG1-201ENST00000330588 ASB2Q96Q27 587 aa7.08□□□□□ -1.28
SMG1-201ENST00000330588 ZNF587Q96SQ5 575 aaPredicted RBP7.08□□□□□ -1.28
SMG1-201ENST00000330588 ADAMTS10Q9H324 1103 aa7.08□□□□□ -1.28
SMG1-201ENST00000330588 TMX1Q9H3N1 280 aa7.08□□□□□ -1.28
SMG1-201ENST00000330588 DHX33Q9H6R0 707 aaKnown RBP7.08□□□□□ -1.28
SMG1-201ENST00000330588 TMEM161AQ9NX61 479 aa7.08□□□□□ -1.28
SMG1-201ENST00000330588 LOXHD1Q8IVV2 1947 aa7.08□□□□□ -1.28
SMG1-201ENST00000330588 ARID2Q68CP9 1835 aa7.08□□□□□ -1.28
SMG1-201ENST00000330588 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.08□□□□□ -1.28
SMG1-201ENST00000330588 ASAP2O43150 1006 aa7.08□□□□□ -1.28
SMG1-201ENST00000330588 NEMFO60524 1076 aa7.08□□□□□ -1.28
SMG1-201ENST00000330588 EOMESO95936 686 aa7.08□□□□□ -1.28
SMG1-201ENST00000330588 ALBP02768 609 aa7.08□□□□□ -1.28
SMG1-201ENST00000330588 NID1P14543 1247 aa7.08□□□□□ -1.28
SMG1-201ENST00000330588 DARSP14868 501 aaKnown RBP7.08□□□□□ -1.28
SMG1-201ENST00000330588 MCM2P49736 904 aa7.08□□□□□ -1.28
SMG1-201ENST00000330588 GPC3P51654 580 aa7.08□□□□□ -1.28
SMG1-201ENST00000330588 UBE3AQ05086 875 aa7.08□□□□□ -1.28
SMG1-201ENST00000330588 SPEM2Q0P670 501 aa7.08□□□□□ -1.28
SMG1-201ENST00000330588 ST3GAL1Q11201 340 aa7.08□□□□□ -1.28
SMG1-201ENST00000330588 PRRT3Q5FWE3 981 aa7.08□□□□□ -1.28
SMG1-201ENST00000330588 PDE12Q6L8Q7 609 aaKnown RBP7.08□□□□□ -1.28
SMG1-201ENST00000330588 C20orf204Q6ZNR8 217 aa7.08□□□□□ -1.28
SMG1-201ENST00000330588 CAPN12Q6ZSI9 719 aa7.08□□□□□ -1.28
SMG1-201ENST00000330588 OTUD6AQ7L8S5 288 aa7.08□□□□□ -1.28
SMG1-201ENST00000330588 RTN4RL1Q86UN2 441 aaPredicted RBP7.08□□□□□ -1.28
SMG1-201ENST00000330588 FAM228AQ86W67 206 aa7.08□□□□□ -1.28
SMG1-201ENST00000330588 DIS3L2Q8IYB7 885 aaKnown RBP7.08□□□□□ -1.28
SMG1-201ENST00000330588 NECAB1Q8N987 351 aa7.08□□□□□ -1.28
SMG1-201ENST00000330588 FBXO18Q8NFZ0 1043 aa7.08□□□□□ -1.28
SMG1-201ENST00000330588 TMEM40Q8WWA1 233 aa7.08□□□□□ -1.28
SMG1-201ENST00000330588 TCP11Q8WWU5 503 aa7.08□□□□□ -1.28
SMG1-201ENST00000330588 ZSWIM4Q9H7M6 989 aa7.08□□□□□ -1.28
SMG1-201ENST00000330588 UPF2Q9HAU5 1272 aaKnown RBP7.08□□□□□ -1.28
SMG1-201ENST00000330588 NEUROD4Q9HD90 331 aa7.08□□□□□ -1.28
SMG1-201ENST00000330588 CYP26B1Q9NR63 512 aa7.08□□□□□ -1.28
SMG1-201ENST00000330588 ANKEF1Q9NU02 776 aa7.08□□□□□ -1.28
SMG1-201ENST00000330588 DACT1Q9NYF0 836 aa7.08□□□□□ -1.28
SMG1-201ENST00000330588 ST3GAL5Q9UNP4 418 aa7.08□□□□□ -1.28
SMG1-201ENST00000330588 AKT3Q9Y243 479 aa7.08□□□□□ -1.28
SMG1-201ENST00000330588 NOC2LQ9Y3T9 749 aaKnown RBP7.08□□□□□ -1.28
SMG1-201ENST00000330588 ZMYM2Q9UBW7 1377 aa7.07□□□□□ -1.28
SMG1-201ENST00000330588 RANBP2P49792 3224 aaKnown RBP7.07□□□□□ -1.28
SMG1-201ENST00000330588 EVPLQ92817 2033 aa7.07□□□□□ -1.28
SMG1-201ENST00000330588 FNDC1Q4ZHG4 1894 aaPredicted RBP7.07□□□□□ -1.28
SMG1-201ENST00000330588 DENND3A2RUS2 1198 aa7.07□□□□□ -1.28
SMG1-201ENST00000330588 BTBD18B2RXH4 712 aa7.07□□□□□ -1.28
SMG1-201ENST00000330588 CHMP2AO43633 222 aa7.07□□□□□ -1.28
SMG1-201ENST00000330588 SFPQP23246 707 aaKnown RBP eCLIP7.07□□□□□ -1.28
SMG1-201ENST00000330588 RAB27AP51159 221 aa7.07□□□□□ -1.28
SMG1-201ENST00000330588 CLCN3P51790 818 aa7.07□□□□□ -1.28
SMG1-201ENST00000330588 NLRP11P59045 1033 aaKnown RBP7.07□□□□□ -1.28
SMG1-201ENST00000330588 KCNA1Q09470 495 aa7.07□□□□□ -1.28
SMG1-201ENST00000330588 BTG3Q14201 252 aaPredicted RBP7.07□□□□□ -1.28
SMG1-201ENST00000330588 KIZQ2M2Z5 673 aa7.07□□□□□ -1.28
SMG1-201ENST00000330588 ANO5Q75V66 913 aa7.07□□□□□ -1.28
SMG1-201ENST00000330588 TMCO2Q7Z6W1 182 aaPredicted RBP7.07□□□□□ -1.28
SMG1-201ENST00000330588 METTL13Q8N6R0 699 aa7.07□□□□□ -1.28
SMG1-201ENST00000330588 GDPD5Q8WTR4 605 aa7.07□□□□□ -1.28
SMG1-201ENST00000330588 SLC7A3Q8WY07 619 aa7.07□□□□□ -1.28
SMG1-201ENST00000330588 C8orf76Q96K31 380 aa7.07□□□□□ -1.28
SMG1-201ENST00000330588 MTMR9Q96QG7 549 aa7.07□□□□□ -1.28
SMG1-201ENST00000330588 ADAM2Q99965 735 aa7.07□□□□□ -1.28
SMG1-201ENST00000330588 HSD17B14Q9BPX1 270 aa7.07□□□□□ -1.28
SMG1-201ENST00000330588 C17orf80Q9BSJ5 609 aa7.07□□□□□ -1.28
SMG1-201ENST00000330588 NFKBIZQ9BYH8 718 aa7.07□□□□□ -1.28
SMG1-201ENST00000330588 GCOM2Q9BZD3 368 aaPredicted RBP7.07□□□□□ -1.28
SMG1-201ENST00000330588 LRFN2Q9ULH4 789 aa7.07□□□□□ -1.28
SMG1-201ENST00000330588 PCDHA12Q9UN75 941 aa7.07□□□□□ -1.28
SMG1-201ENST00000330588 LZTS1Q9Y250 596 aa7.07□□□□□ -1.28
SMG1-201ENST00000330588 PCDHB7Q9Y5E2 793 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 148.3 ms