RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 TNFAIP3P21580 790 aa18.32■□□□□ 0.52
DDX41-201ENST00000330503 MATR3P43243 847 aaKnown RBP eCLIP18.32■□□□□ 0.52
DDX41-201ENST00000330503 CLCN3P51790 818 aa18.32■□□□□ 0.52
DDX41-201ENST00000330503 MFAP3P55082 362 aa18.32■□□□□ 0.52
DDX41-201ENST00000330503 SEZ6Q53EL9 994 aa18.32■□□□□ 0.52
DDX41-201ENST00000330503 PALB2Q86YC2 1186 aa18.32■□□□□ 0.52
DDX41-201ENST00000330503 ZNF668Q96K58 619 aaPredicted RBP18.32■□□□□ 0.52
DDX41-201ENST00000330503 CAPZA3Q96KX2 299 aa18.32■□□□□ 0.52
DDX41-201ENST00000330503 NT5C1BQ96P26 610 aa18.32■□□□□ 0.52
DDX41-201ENST00000330503 MAP7D2Q96T17 732 aa18.32■□□□□ 0.52
DDX41-201ENST00000330503 PI4K2AQ9BTU6 479 aa18.32■□□□□ 0.52
DDX41-201ENST00000330503 MRPL4Q9BYD3 311 aaKnown RBP18.32■□□□□ 0.52
DDX41-201ENST00000330503 RBAKQ9NYW8 714 aaPredicted RBP18.32■□□□□ 0.52
DDX41-201ENST00000330503 GRID2IPA4D2P6 1211 aa18.31■□□□□ 0.52
DDX41-201ENST00000330503 PPFIA4O75335 1185 aa18.31■□□□□ 0.52
DDX41-201ENST00000330503 SGPL1O95470 568 aa18.31■□□□□ 0.52
DDX41-201ENST00000330503 PRKCBP05771 671 aa18.31■□□□□ 0.52
DDX41-201ENST00000330503 ZNF286BP0CG31 522 aa18.31■□□□□ 0.52
DDX41-201ENST00000330503 GALCP54803 685 aa18.31■□□□□ 0.52
DDX41-201ENST00000330503 IGBP1P78318 339 aa18.31■□□□□ 0.52
DDX41-201ENST00000330503 ZACNQ401N2 412 aa18.31■□□□□ 0.52
DDX41-201ENST00000330503 DUSP28Q4G0W2 176 aa18.31■□□□□ 0.52
DDX41-201ENST00000330503 MORN1Q5T089 497 aa18.31■□□□□ 0.52
DDX41-201ENST00000330503 ZBTB8OSQ8IWT0 167 aa18.31■□□□□ 0.52
DDX41-201ENST00000330503 METTL13Q8N6R0 699 aa18.31■□□□□ 0.52
DDX41-201ENST00000330503 LINC01465Q8N7H1 131 aa18.31■□□□□ 0.52
DDX41-201ENST00000330503 FNBP1Q96RU3 617 aa18.31■□□□□ 0.52
DDX41-201ENST00000330503 FZD8Q9H461 694 aa18.31■□□□□ 0.52
DDX41-201ENST00000330503 TAS2R14Q9NYV8 317 aa18.31■□□□□ 0.52
DDX41-201ENST00000330503 TRPM7Q96QT4 1865 aa18.31■□□□□ 0.52
DDX41-201ENST00000330503 CLDN3O15551 220 aa18.31■□□□□ 0.52
DDX41-201ENST00000330503 ADCY6O43306 1168 aa18.31■□□□□ 0.52
DDX41-201ENST00000330503 TOM1L1O75674 476 aa18.31■□□□□ 0.52
DDX41-201ENST00000330503 VNN1O95497 513 aa18.31■□□□□ 0.52
DDX41-201ENST00000330503 CHRNB2P17787 502 aa18.31■□□□□ 0.52
DDX41-201ENST00000330503 TNNI1P19237 187 aa18.31■□□□□ 0.52
DDX41-201ENST00000330503 TDRD10Q5VZ19 366 aaKnown RBP18.31■□□□□ 0.52
DDX41-201ENST00000330503 NFRKBQ6P4R8 1299 aa18.31■□□□□ 0.52
DDX41-201ENST00000330503 CREG2Q8IUH2 290 aa18.31■□□□□ 0.52
DDX41-201ENST00000330503 NOA1Q8NC60 698 aaKnown RBP18.31■□□□□ 0.52
DDX41-201ENST00000330503 COG1Q8WTW3 980 aa18.31■□□□□ 0.52
DDX41-201ENST00000330503 OSBPL9Q96SU4 736 aa18.31■□□□□ 0.52
DDX41-201ENST00000330503 C2orf40Q9H1Z8 148 aa18.31■□□□□ 0.52
DDX41-201ENST00000330503 ABHD16BQ9H3Z7 469 aa18.31■□□□□ 0.52
DDX41-201ENST00000330503 ASAP2O43150 1006 aa18.3■□□□□ 0.52
DDX41-201ENST00000330503 CYP26A1O43174 497 aa18.3■□□□□ 0.52
DDX41-201ENST00000330503 ECM2O94769 699 aaPredicted RBP18.3■□□□□ 0.52
DDX41-201ENST00000330503 USP8P40818 1118 aa18.3■□□□□ 0.52
DDX41-201ENST00000330503 PTENP60484 403 aa18.3■□□□□ 0.52
DDX41-201ENST00000330503 MAPK6Q16659 721 aa18.3■□□□□ 0.52
DDX41-201ENST00000330503 IQSEC1Q6DN90 963 aa18.3■□□□□ 0.52
DDX41-201ENST00000330503 ZBTB33Q86T24 672 aa18.3■□□□□ 0.52
DDX41-201ENST00000330503 MINDY3Q9H8M7 445 aa18.3■□□□□ 0.52
DDX41-201ENST00000330503 EVPLQ92817 2033 aa18.3■□□□□ 0.52
DDX41-201ENST00000330503 MANSC4A6NHS7 340 aaPredicted RBP18.29■□□□□ 0.52
DDX41-201ENST00000330503 TMCO5BA8MYB1 307 aa18.29■□□□□ 0.52
DDX41-201ENST00000330503 FTCDO95954 541 aa18.29■□□□□ 0.52
DDX41-201ENST00000330503 HLA-DRAP01903 254 aa18.29■□□□□ 0.52
DDX41-201ENST00000330503 HARSP12081 509 aaKnown RBP18.29■□□□□ 0.52
DDX41-201ENST00000330503 HOXD8P13378 290 aaPredicted RBP18.29■□□□□ 0.52
DDX41-201ENST00000330503 TNFSF9P41273 254 aa18.29■□□□□ 0.52
DDX41-201ENST00000330503 MEI1Q5TIA1 1274 aa18.29■□□□□ 0.52
DDX41-201ENST00000330503 NOP9Q86U38 636 aaKnown RBP18.29■□□□□ 0.52
DDX41-201ENST00000330503 NLRP4Q96MN2 994 aa18.29■□□□□ 0.52
DDX41-201ENST00000330503 CGRRF1Q99675 332 aa18.29■□□□□ 0.52
DDX41-201ENST00000330503 PARD6BQ9BYG5 372 aa18.29■□□□□ 0.52
DDX41-201ENST00000330503 ANKZF1Q9H8Y5 726 aa18.29■□□□□ 0.52
DDX41-201ENST00000330503 PTPRHQ9HD43 1115 aa18.29■□□□□ 0.52
DDX41-201ENST00000330503 ACP6Q9NPH0 428 aa18.29■□□□□ 0.52
DDX41-201ENST00000330503 NOCTQ9UK39 431 aaKnown RBP18.29■□□□□ 0.52
DDX41-201ENST00000330503 HYOU1Q9Y4L1 999 aa18.29■□□□□ 0.52
DDX41-201ENST00000330503 A0A0A6YYK5 440 aaPredicted RBP18.29■□□□□ 0.52
DDX41-201ENST00000330503 ACKR2O00590 384 aa18.29■□□□□ 0.52
DDX41-201ENST00000330503 ZC3H11AO75152 810 aaKnown RBP eCLIP18.29■□□□□ 0.52
DDX41-201ENST00000330503 PROZP22891 400 aa18.29■□□□□ 0.52
DDX41-201ENST00000330503 MBTD1Q05BQ5 628 aa18.29■□□□□ 0.52
DDX41-201ENST00000330503 MCL1Q07820 350 aa18.29■□□□□ 0.52
DDX41-201ENST00000330503 TFDP1Q14186 410 aa18.29■□□□□ 0.52
DDX41-201ENST00000330503 HSP90AA2PQ14568 343 aaPredicted RBP18.29■□□□□ 0.52
DDX41-201ENST00000330503 PRAMEF19Q5SWL8 479 aa18.29■□□□□ 0.52
DDX41-201ENST00000330503 TSHZ1Q6ZSZ6 1077 aa18.29■□□□□ 0.52
DDX41-201ENST00000330503 RPUSD2Q8IZ73 545 aaKnown RBP18.29■□□□□ 0.52
DDX41-201ENST00000330503 LRRC57Q8N9N7 239 aa18.29■□□□□ 0.52
DDX41-201ENST00000330503 OR5B17Q8NGF7 314 aa18.29■□□□□ 0.52
DDX41-201ENST00000330503 DHX38Q92620 1227 aaKnown RBP18.29■□□□□ 0.52
DDX41-201ENST00000330503 PCDHB18PQ96TA0 734 aa18.29■□□□□ 0.52
DDX41-201ENST00000330503 ZHX1Q9UKY1 873 aaPredicted RBP18.29■□□□□ 0.52
DDX41-201ENST00000330503 DOCK3Q8IZD9 2030 aa18.28■□□□□ 0.52
DDX41-201ENST00000330503 IQCF3P0C7M6 154 aa18.28■□□□□ 0.52
DDX41-201ENST00000330503 TUBB4BP68371 445 aa18.28■□□□□ 0.52
DDX41-201ENST00000330503 SCARA3Q6AZY7 606 aa18.28■□□□□ 0.52
DDX41-201ENST00000330503 SAPCD2Q86UD0 394 aa18.28■□□□□ 0.52
DDX41-201ENST00000330503 SLC47A2Q86VL8 602 aa18.28■□□□□ 0.52
DDX41-201ENST00000330503 MSL3Q8N5Y2 521 aaKnown RBP18.28■□□□□ 0.52
DDX41-201ENST00000330503 TPCN2Q8NHX9 752 aa18.28■□□□□ 0.52
DDX41-201ENST00000330503 EPS8L1Q8TE68 723 aa18.28■□□□□ 0.52
DDX41-201ENST00000330503 TCHPQ9BT92 498 aa18.28■□□□□ 0.52
DDX41-201ENST00000330503 IFT122Q9HBG6 1241 aa18.28■□□□□ 0.52
DDX41-201ENST00000330503 ZNF236Q9UL36 1845 aa18.28■□□□□ 0.52
DDX41-201ENST00000330503 H3BRB1 525 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms