RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 NET1Q7Z628 596 aaPredicted RBP8.95□□□□□ -0.98
SKA2-201ENST00000330137 CCDC125Q86Z20 511 aa8.95□□□□□ -0.98
SKA2-201ENST00000330137 RAPGEF4Q8WZA2 1011 aa8.95□□□□□ -0.98
SKA2-201ENST00000330137 SLC35B4Q969S0 331 aa8.95□□□□□ -0.98
SKA2-201ENST00000330137 VTI1AQ96AJ9 217 aa8.95□□□□□ -0.98
SKA2-201ENST00000330137 PTCD3Q96EY7 689 aaKnown RBP8.95□□□□□ -0.98
SKA2-201ENST00000330137 ECSITQ9BQ95 431 aa8.95□□□□□ -0.98
SKA2-201ENST00000330137 LRRC19Q9H756 370 aa8.95□□□□□ -0.98
SKA2-201ENST00000330137 EMILIN3Q9NT22 766 aa8.95□□□□□ -0.98
SKA2-201ENST00000330137 BLOC1S4Q9NUP1 217 aa8.95□□□□□ -0.98
SKA2-201ENST00000330137 PPP1R1BQ9UD71 204 aaPredicted RBP8.95□□□□□ -0.98
SKA2-201ENST00000330137 TUBGCP4Q9UGJ1 667 aa8.95□□□□□ -0.98
SKA2-201ENST00000330137 MYH3P11055 1940 aa8.94□□□□□ -0.98
SKA2-201ENST00000330137 EIF4E1BA6NMX2 242 aaKnown RBP8.94□□□□□ -0.98
SKA2-201ENST00000330137 NBPF26B4DH59 902 aa8.94□□□□□ -0.98
SKA2-201ENST00000330137 ECEL1O95672 775 aa8.94□□□□□ -0.98
SKA2-201ENST00000330137 IL1BP01584 269 aa8.94□□□□□ -0.98
SKA2-201ENST00000330137 CYP1A1P04798 512 aaPredicted RBP8.94□□□□□ -0.98
SKA2-201ENST00000330137 TROVE2P10155 538 aaKnown RBP eCLIP8.94□□□□□ -0.98
SKA2-201ENST00000330137 FGFR4P22455 802 aa8.94□□□□□ -0.98
SKA2-201ENST00000330137 SMARCA1P28370 1054 aa8.94□□□□□ -0.98
SKA2-201ENST00000330137 COILP38432 576 aaPredicted RBP8.94□□□□□ -0.98
SKA2-201ENST00000330137 SLCO1A2P46721 670 aa8.94□□□□□ -0.98
SKA2-201ENST00000330137 GPSM2P81274 684 aa8.94□□□□□ -0.98
SKA2-201ENST00000330137 PLCB3Q01970 1234 aa8.94□□□□□ -0.98
SKA2-201ENST00000330137 TRMT5Q32P41 509 aaKnown RBP8.94□□□□□ -0.98
SKA2-201ENST00000330137 C6orf163Q5TEZ5 329 aa8.94□□□□□ -0.98
SKA2-201ENST00000330137 BORAQ6PGQ7 559 aa8.94□□□□□ -0.98
SKA2-201ENST00000330137 B3GNT6Q6ZMB0 384 aa8.94□□□□□ -0.98
SKA2-201ENST00000330137 CLNKQ7Z7G1 428 aa8.94□□□□□ -0.98
SKA2-201ENST00000330137 KIAA0825Q8IV33 1275 aa8.94□□□□□ -0.98
SKA2-201ENST00000330137 LCORLQ8N3X6 602 aa8.94□□□□□ -0.98
SKA2-201ENST00000330137 PRELID2Q8N945 189 aa8.94□□□□□ -0.98
SKA2-201ENST00000330137 RBM46Q8TBY0 533 aaKnown RBP8.94□□□□□ -0.98
SKA2-201ENST00000330137 MGARPQ8TDB4 240 aa8.94□□□□□ -0.98
SKA2-201ENST00000330137 RAD54LQ92698 747 aa8.94□□□□□ -0.98
SKA2-201ENST00000330137 GLG1Q92896 1179 aa8.94□□□□□ -0.98
SKA2-201ENST00000330137 EEF2KMTQ96G04 330 aa8.94□□□□□ -0.98
SKA2-201ENST00000330137 NSL1Q96IY1 281 aa8.94□□□□□ -0.98
SKA2-201ENST00000330137 MAF1Q9H063 256 aa8.94□□□□□ -0.98
SKA2-201ENST00000330137 WNT8AQ9H1J5 351 aa8.94□□□□□ -0.98
SKA2-201ENST00000330137 RANBP17Q9H2T7 1088 aaKnown RBP8.94□□□□□ -0.98
SKA2-201ENST00000330137 THEGQ9P2T0 379 aa8.94□□□□□ -0.98
SKA2-201ENST00000330137 HSFX1Q9UBD0 423 aa8.94□□□□□ -0.98
SKA2-201ENST00000330137 BARX2Q9UMQ3 279 aaPredicted RBP8.94□□□□□ -0.98
SKA2-201ENST00000330137 TMED5Q9Y3A6 229 aa8.94□□□□□ -0.98
SKA2-201ENST00000330137 FAM205AQ6ZU69 1335 aa8.94□□□□□ -0.98
SKA2-201ENST00000330137 PAPPAQ13219 1627 aa8.94□□□□□ -0.98
SKA2-201ENST00000330137 CCDC162PA2VCL2 907 aa8.94□□□□□ -0.98
SKA2-201ENST00000330137 NDC80O14777 642 aa8.94□□□□□ -0.98
SKA2-201ENST00000330137 TGDSO95455 350 aa8.94□□□□□ -0.98
SKA2-201ENST00000330137 FOXN2P32314 431 aa8.94□□□□□ -0.98
SKA2-201ENST00000330137 GALCP54803 685 aa8.94□□□□□ -0.98
SKA2-201ENST00000330137 AP2B1P63010 937 aa8.94□□□□□ -0.98
SKA2-201ENST00000330137 IRX4P78413 519 aa8.94□□□□□ -0.98
SKA2-201ENST00000330137 PPARDQ03181 441 aa8.94□□□□□ -0.98
SKA2-201ENST00000330137 MPP3Q13368 585 aa8.94□□□□□ -0.98
SKA2-201ENST00000330137 MPP2Q14168 576 aa8.94□□□□□ -0.98
SKA2-201ENST00000330137 LONRF1Q17RB8 773 aa8.94□□□□□ -0.98
SKA2-201ENST00000330137 SEL1L2Q5TEA6 688 aa8.94□□□□□ -0.98
SKA2-201ENST00000330137 TMCO4Q5TGY1 634 aa8.94□□□□□ -0.98
SKA2-201ENST00000330137 C3orf62Q6ZUJ4 267 aa8.94□□□□□ -0.98
SKA2-201ENST00000330137 CCDC65Q8IXS2 484 aa8.94□□□□□ -0.98
SKA2-201ENST00000330137 ANKRD42Q8N9B4 389 aa8.94□□□□□ -0.98
SKA2-201ENST00000330137 SLC35G2Q8TBE7 412 aa8.94□□□□□ -0.98
SKA2-201ENST00000330137 UBA5Q9GZZ9 404 aa8.94□□□□□ -0.98
SKA2-201ENST00000330137 ERVK-5Q9HDB9 667 aa8.94□□□□□ -0.98
SKA2-201ENST00000330137 TRPV5Q9NQA5 729 aa8.94□□□□□ -0.98
SKA2-201ENST00000330137 TUBA8Q9NY65 449 aaPredicted RBP8.94□□□□□ -0.98
SKA2-201ENST00000330137 LAMB1P07942 1786 aa8.93□□□□□ -0.98
SKA2-201ENST00000330137 BRWD3Q6RI45 1802 aa8.93□□□□□ -0.98
SKA2-201ENST00000330137 A0A0J9YVX5 310 aa8.93□□□□□ -0.98
SKA2-201ENST00000330137 ANKRD62A6NC57 917 aa8.93□□□□□ -0.98
SKA2-201ENST00000330137 GYG2O15488 501 aa8.93□□□□□ -0.98
SKA2-201ENST00000330137 ZBED4O75132 1171 aa8.93□□□□□ -0.98
SKA2-201ENST00000330137 MTA2O94776 668 aa8.93□□□□□ -0.98
SKA2-201ENST00000330137 OATP04181 439 aa8.93□□□□□ -0.98
SKA2-201ENST00000330137 PHKA1P46020 1223 aa8.93□□□□□ -0.98
SKA2-201ENST00000330137 GJA8P48165 433 aa8.93□□□□□ -0.98
SKA2-201ENST00000330137 ASPHQ12797 758 aa8.93□□□□□ -0.98
SKA2-201ENST00000330137 KCNH2Q12809 1159 aa8.93□□□□□ -0.98
SKA2-201ENST00000330137 GRB10Q13322 594 aa8.93□□□□□ -0.98
SKA2-201ENST00000330137 KYNUQ16719 465 aa8.93□□□□□ -0.98
SKA2-201ENST00000330137 TMEM266Q2M3C6 531 aa8.93□□□□□ -0.98
SKA2-201ENST00000330137 TMEM119Q4V9L6 283 aa8.93□□□□□ -0.98
SKA2-201ENST00000330137 TAF1BQ53T94 588 aaPredicted RBP8.93□□□□□ -0.98
SKA2-201ENST00000330137 MIGA2Q7L4E1 593 aa8.93□□□□□ -0.98
SKA2-201ENST00000330137 NLRP9Q7RTR0 991 aa8.93□□□□□ -0.98
SKA2-201ENST00000330137 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.93□□□□□ -0.98
SKA2-201ENST00000330137 GDAP1Q8TB36 358 aa8.93□□□□□ -0.98
SKA2-201ENST00000330137 MCUR1Q96AQ8 359 aa8.93□□□□□ -0.98
SKA2-201ENST00000330137 CLMNQ96JQ2 1002 aa8.93□□□□□ -0.98
SKA2-201ENST00000330137 TSPAN18Q96SJ8 248 aa8.93□□□□□ -0.98
SKA2-201ENST00000330137 MIPEPQ99797 713 aa8.93□□□□□ -0.98
SKA2-201ENST00000330137 PLVAPQ9BX97 442 aa8.93□□□□□ -0.98
SKA2-201ENST00000330137 PHACTR1Q9C0D0 580 aa8.93□□□□□ -0.98
SKA2-201ENST00000330137 BMP2KQ9NSY1 1161 aaPredicted RBP8.93□□□□□ -0.98
SKA2-201ENST00000330137 BARHL2Q9NY43 387 aa8.93□□□□□ -0.98
SKA2-201ENST00000330137 SUN2Q9UH99 717 aa8.93□□□□□ -0.98
SKA2-201ENST00000330137 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms