RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 PTPAQ15257 358 aa12.12□□□□□ -0.47
COL4A5-201ENST00000328300 DACT2Q5SW24 774 aa12.12□□□□□ -0.47
COL4A5-201ENST00000328300 MGARPQ8TDB4 240 aa12.12□□□□□ -0.47
COL4A5-201ENST00000328300 DEPDC1BQ8WUY9 529 aa12.12□□□□□ -0.47
COL4A5-201ENST00000328300 TAAR1Q96RJ0 339 aa12.12□□□□□ -0.47
COL4A5-201ENST00000328300 EPAS1Q99814 870 aa12.12□□□□□ -0.47
COL4A5-201ENST00000328300 PARD6BQ9BYG5 372 aa12.12□□□□□ -0.47
COL4A5-201ENST00000328300 GPBP1L1Q9HC44 474 aaPredicted RBP12.12□□□□□ -0.47
COL4A5-201ENST00000328300 UBQLN1Q9UMX0 589 aaKnown RBP12.12□□□□□ -0.47
COL4A5-201ENST00000328300 PCDHB2Q9Y5E7 798 aa12.12□□□□□ -0.47
COL4A5-201ENST00000328300 ZMYM2Q9UBW7 1377 aa12.12□□□□□ -0.47
COL4A5-201ENST00000328300 RAD51Q06609 339 aa12.12□□□□□ -0.47
COL4A5-201ENST00000328300 PCSK9Q8NBP7 692 aaKnown RBP12.12□□□□□ -0.47
COL4A5-201ENST00000328300 ENGASEQ8NFI3 743 aa12.12□□□□□ -0.47
COL4A5-201ENST00000328300 OSBPL9Q96SU4 736 aa12.12□□□□□ -0.47
COL4A5-201ENST00000328300 KCNQ5Q9NR82 932 aa12.12□□□□□ -0.47
COL4A5-201ENST00000328300 A0A087WWV3 80 aa12.12□□□□□ -0.47
COL4A5-201ENST00000328300 DPYSL4O14531 572 aa12.12□□□□□ -0.47
COL4A5-201ENST00000328300 RPS6KA5O75582 802 aa12.12□□□□□ -0.47
COL4A5-201ENST00000328300 ACTR2P61160 394 aa12.12□□□□□ -0.47
COL4A5-201ENST00000328300 NCOA4Q13772 614 aa12.12□□□□□ -0.47
COL4A5-201ENST00000328300 NIF3L1Q9GZT8 377 aa12.12□□□□□ -0.47
COL4A5-201ENST00000328300 KLHL8Q9P2G9 620 aaPredicted RBP12.12□□□□□ -0.47
COL4A5-201ENST00000328300 FAN1Q9Y2M0 1017 aa12.12□□□□□ -0.47
COL4A5-201ENST00000328300 CCDC38Q502W7 563 aa12.12□□□□□ -0.47
COL4A5-201ENST00000328300 KRT35Q92764 455 aa12.12□□□□□ -0.47
COL4A5-201ENST00000328300 C18orf8Q96DM3 657 aa12.12□□□□□ -0.47
COL4A5-201ENST00000328300 FRMD8P1Q9BZ68 369 aaPredicted RBP12.12□□□□□ -0.47
COL4A5-201ENST00000328300 PDE11AQ9HCR9 933 aa12.12□□□□□ -0.47
COL4A5-201ENST00000328300 PPATQ06203 517 aa12.12□□□□□ -0.47
COL4A5-201ENST00000328300 PTPROQ16827 1216 aa12.12□□□□□ -0.47
COL4A5-201ENST00000328300 C4orf50Q6ZRC1 276 aa12.12□□□□□ -0.47
COL4A5-201ENST00000328300 CATSPER3Q86XQ3 398 aa12.12□□□□□ -0.47
COL4A5-201ENST00000328300 TMC2Q8TDI7 906 aa12.12□□□□□ -0.47
COL4A5-201ENST00000328300 TBC1D12O60347 775 aa12.11□□□□□ -0.47
COL4A5-201ENST00000328300 CHEK2O96017 543 aa12.11□□□□□ -0.47
COL4A5-201ENST00000328300 TMEM253P0C7T8 217 aa12.11□□□□□ -0.47
COL4A5-201ENST00000328300 TRIM49P0CI25 452 aa12.11□□□□□ -0.47
COL4A5-201ENST00000328300 TRIM49CP0CI26 452 aa12.11□□□□□ -0.47
COL4A5-201ENST00000328300 STAG3L1P0CL83 205 aa12.11□□□□□ -0.47
COL4A5-201ENST00000328300 GUCY2CP25092 1073 aa12.11□□□□□ -0.47
COL4A5-201ENST00000328300 SH3BGRP55822 239 aaPredicted RBP12.11□□□□□ -0.47
COL4A5-201ENST00000328300 HEATR6Q6AI08 1181 aaKnown RBP12.11□□□□□ -0.47
COL4A5-201ENST00000328300 SPATA2LQ8IUW3 424 aaPredicted RBP12.11□□□□□ -0.47
COL4A5-201ENST00000328300 SCN4BQ8IWT1 228 aa12.11□□□□□ -0.47
COL4A5-201ENST00000328300 C6orf222P0C671 652 aaPredicted RBP12.11□□□□□ -0.47
COL4A5-201ENST00000328300 SHMT1P34896 483 aa12.11□□□□□ -0.47
COL4A5-201ENST00000328300 ROR1Q01973 937 aa12.11□□□□□ -0.47
COL4A5-201ENST00000328300 BBS9Q3SYG4 887 aa12.11□□□□□ -0.47
COL4A5-201ENST00000328300 FIGNQ5HY92 759 aa12.11□□□□□ -0.47
COL4A5-201ENST00000328300 HDAC11Q96DB2 347 aa12.11□□□□□ -0.47
COL4A5-201ENST00000328300 NUF2Q9BZD4 464 aa12.11□□□□□ -0.47
COL4A5-201ENST00000328300 UNC45AQ9H3U1 944 aa12.11□□□□□ -0.47
COL4A5-201ENST00000328300 FARP1Q9Y4F1 1045 aaPredicted RBP12.11□□□□□ -0.47
COL4A5-201ENST00000328300 FAM205CA6NFA0 338 aa12.11□□□□□ -0.47
COL4A5-201ENST00000328300 UCHL3P15374 230 aa12.11□□□□□ -0.47
COL4A5-201ENST00000328300 VEGFAP15692 232 aaPredicted RBP12.11□□□□□ -0.47
COL4A5-201ENST00000328300 BCAR1P56945 870 aa12.11□□□□□ -0.47
COL4A5-201ENST00000328300 NAB2Q15742 525 aa12.11□□□□□ -0.47
COL4A5-201ENST00000328300 RWDD4Q6NW29 188 aaKnown RBP12.11□□□□□ -0.47
COL4A5-201ENST00000328300 GLB1LQ6UWU2 654 aa12.11□□□□□ -0.47
COL4A5-201ENST00000328300 SNF8Q96H20 258 aa12.11□□□□□ -0.47
COL4A5-201ENST00000328300 AGAP1Q9UPQ3 857 aa12.11□□□□□ -0.47
COL4A5-201ENST00000328300 ATRNO75882 1429 aa12.11□□□□□ -0.47
COL4A5-201ENST00000328300 TMED2Q15363 201 aa12.11□□□□□ -0.47
COL4A5-201ENST00000328300 FAM102AQ5T9C2 384 aaPredicted RBP12.11□□□□□ -0.47
COL4A5-201ENST00000328300 RASGRP2Q7LDG7 609 aa12.11□□□□□ -0.47
COL4A5-201ENST00000328300 MICAL1Q8TDZ2 1067 aa12.11□□□□□ -0.47
COL4A5-201ENST00000328300 SENP7Q9BQF6 1050 aa12.11□□□□□ -0.47
COL4A5-201ENST00000328300 Q9H521 79 aa12.11□□□□□ -0.47
COL4A5-201ENST00000328300 TBX20Q9UMR3 447 aa12.11□□□□□ -0.47
COL4A5-201ENST00000328300 VCAM1P19320 739 aa12.11□□□□□ -0.47
COL4A5-201ENST00000328300 HSD17B4P51659 736 aa12.11□□□□□ -0.47
COL4A5-201ENST00000328300 MKL1Q969V6 931 aa12.11□□□□□ -0.47
COL4A5-201ENST00000328300 BAIAP2L1Q9UHR4 511 aa12.11□□□□□ -0.47
COL4A5-201ENST00000328300 TCF7P36402 384 aaPredicted RBP12.1□□□□□ -0.47
COL4A5-201ENST00000328300 EFCAB12Q6NXP0 572 aa12.1□□□□□ -0.47
COL4A5-201ENST00000328300 TMEM60Q9H2L4 133 aa12.1□□□□□ -0.47
COL4A5-201ENST00000328300 VTA1Q9NP79 307 aa12.1□□□□□ -0.47
COL4A5-201ENST00000328300 HPSEQ9Y251 543 aa12.1□□□□□ -0.47
COL4A5-201ENST00000328300 BCL9LQ86UU0 1499 aa12.1□□□□□ -0.47
COL4A5-201ENST00000328300 A0A087WUV0 522 aaPredicted RBP12.1□□□□□ -0.47
COL4A5-201ENST00000328300 GPR182O15218 404 aa12.1□□□□□ -0.47
COL4A5-201ENST00000328300 TEX33O43247 280 aa12.1□□□□□ -0.47
COL4A5-201ENST00000328300 FBXO41Q8TF61 875 aa12.1□□□□□ -0.47
COL4A5-201ENST00000328300 TMEM143Q96AN5 459 aa12.1□□□□□ -0.47
COL4A5-201ENST00000328300 GDAP1L1Q96MZ0 367 aa12.1□□□□□ -0.47
COL4A5-201ENST00000328300 PCDHB8Q9UN66 801 aa12.1□□□□□ -0.47
COL4A5-201ENST00000328300 MYPNQ86TC9 1320 aa12.1□□□□□ -0.47
COL4A5-201ENST00000328300 CAMTA1Q9Y6Y1 1673 aa12.1□□□□□ -0.47
COL4A5-201ENST00000328300 NFAT5O94916 1531 aa12.1□□□□□ -0.47
COL4A5-201ENST00000328300 KPNA7A9QM74 516 aa12.1□□□□□ -0.47
COL4A5-201ENST00000328300 APOL1O14791 398 aa12.1□□□□□ -0.47
COL4A5-201ENST00000328300 FOXN1O15353 648 aa12.1□□□□□ -0.47
COL4A5-201ENST00000328300 MX2P20592 715 aa12.1□□□□□ -0.47
COL4A5-201ENST00000328300 CCT5P48643 541 aa12.1□□□□□ -0.47
COL4A5-201ENST00000328300 NFIAQ12857 509 aa12.1□□□□□ -0.47
COL4A5-201ENST00000328300 STK4Q13043 487 aa12.1□□□□□ -0.47
COL4A5-201ENST00000328300 NNTQ13423 1086 aa12.1□□□□□ -0.47
COL4A5-201ENST00000328300 CDO1Q16878 200 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms