RNA–Protein interactions for RNA: ENST00000328020.10

CMTM1-201, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-201ENST00000328020 TSPAN18Q96SJ8 248 aa15.35■□□□□ 0.05
CMTM1-201ENST00000328020 PRO3102Q9H379 93 aa15.35■□□□□ 0.05
CMTM1-201ENST00000328020 RPF1Q9H9Y2 349 aaKnown RBP15.35■□□□□ 0.05
CMTM1-201ENST00000328020 PLEKHA5Q9HAU0 1116 aa15.35■□□□□ 0.05
CMTM1-201ENST00000328020 SNTG2Q9NY99 539 aa15.35■□□□□ 0.05
CMTM1-201ENST00000328020 HSPBP1Q9NZL4 362 aa15.35■□□□□ 0.05
CMTM1-201ENST00000328020 MSRAQ9UJ68 235 aa15.35■□□□□ 0.05
CMTM1-201ENST00000328020 FRMD4BQ9Y2L6 1034 aa15.35■□□□□ 0.05
CMTM1-201ENST00000328020 RANBP2P49792 3224 aaKnown RBP15.35■□□□□ 0.05
CMTM1-201ENST00000328020 ZNF233A6NK53 670 aa15.34■□□□□ 0.05
CMTM1-201ENST00000328020 CETN3O15182 167 aa15.34■□□□□ 0.05
CMTM1-201ENST00000328020 EXOC3O60645 756 aa15.34■□□□□ 0.05
CMTM1-201ENST00000328020 DGKIO75912 1065 aa15.34■□□□□ 0.05
CMTM1-201ENST00000328020 RECQL4O94761 1208 aa15.34■□□□□ 0.05
CMTM1-201ENST00000328020 FGFR1OPO95684 399 aaKnown RBP15.34■□□□□ 0.05
CMTM1-201ENST00000328020 NR3C1P04150 777 aa15.34■□□□□ 0.05
CMTM1-201ENST00000328020 AKAP5P24588 427 aa15.34■□□□□ 0.05
CMTM1-201ENST00000328020 CCNE1P24864 410 aa15.34■□□□□ 0.05
CMTM1-201ENST00000328020 ADSSP30520 456 aa15.34■□□□□ 0.05
CMTM1-201ENST00000328020 CYP2J2P51589 502 aa15.34■□□□□ 0.05
CMTM1-201ENST00000328020 OSTNP61366 133 aa15.34■□□□□ 0.05
CMTM1-201ENST00000328020 NFIL3Q16649 462 aa15.34■□□□□ 0.05
CMTM1-201ENST00000328020 CENPPQ6IPU0 288 aa15.34■□□□□ 0.05
CMTM1-201ENST00000328020 USP37Q86T82 979 aa15.34■□□□□ 0.05
CMTM1-201ENST00000328020 CMTR2Q8IYT2 770 aaKnown RBP15.34■□□□□ 0.05
CMTM1-201ENST00000328020 CRIPAKQ8N1N5 446 aa15.34■□□□□ 0.05
CMTM1-201ENST00000328020 NOC3LQ8WTT2 800 aaKnown RBP15.34■□□□□ 0.05
CMTM1-201ENST00000328020 NELFBQ8WX92 580 aa15.34■□□□□ 0.05
CMTM1-201ENST00000328020 LPPQ93052 612 aa15.34■□□□□ 0.05
CMTM1-201ENST00000328020 CBWD1Q9BRT8 395 aa15.34■□□□□ 0.05
CMTM1-201ENST00000328020 FAM213AQ9BRX8 229 aa15.34■□□□□ 0.05
CMTM1-201ENST00000328020 NAT10Q9H0A0 1025 aaKnown RBP15.34■□□□□ 0.05
CMTM1-201ENST00000328020 HES2Q9Y543 173 aa15.34■□□□□ 0.05
CMTM1-201ENST00000328020 PCDHA11Q9Y5I1 949 aa15.34■□□□□ 0.05
CMTM1-201ENST00000328020 ARL5CA6NH57 179 aa15.33■□□□□ 0.04
CMTM1-201ENST00000328020 TBKBP1A7MCY6 615 aa15.33■□□□□ 0.04
CMTM1-201ENST00000328020 PPP1R3GB7ZBB8 358 aa15.33■□□□□ 0.04
CMTM1-201ENST00000328020 TISP43B9A030 160 aa15.33■□□□□ 0.04
CMTM1-201ENST00000328020 CLIC2O15247 247 aa15.33■□□□□ 0.04
CMTM1-201ENST00000328020 XPOTO43592 962 aaKnown RBP15.33■□□□□ 0.04
CMTM1-201ENST00000328020 IL18RAPO95256 599 aa15.33■□□□□ 0.04
CMTM1-201ENST00000328020 CCDC192P0DO97 292 aa15.33■□□□□ 0.04
CMTM1-201ENST00000328020 FGFR1P11362 822 aa15.33■□□□□ 0.04
CMTM1-201ENST00000328020 ATF7P17544 494 aaPredicted RBP15.33■□□□□ 0.04
CMTM1-201ENST00000328020 NR2F2P24468 414 aa15.33■□□□□ 0.04
CMTM1-201ENST00000328020 HTRA4P83105 476 aaPredicted RBP15.33■□□□□ 0.04
CMTM1-201ENST00000328020 FKBP3Q00688 224 aaKnown RBP15.33■□□□□ 0.04
CMTM1-201ENST00000328020 RNASELQ05823 741 aaKnown RBP15.33■□□□□ 0.04
CMTM1-201ENST00000328020 PPP2R3AQ06190 1150 aa15.33■□□□□ 0.04
CMTM1-201ENST00000328020 BTG3Q14201 252 aaPredicted RBP15.33■□□□□ 0.04
CMTM1-201ENST00000328020 SURF1Q15526 300 aa15.33■□□□□ 0.04
CMTM1-201ENST00000328020 NOMO2Q5JPE7 1267 aa15.33■□□□□ 0.04
CMTM1-201ENST00000328020 AGMOQ6ZNB7 445 aa15.33■□□□□ 0.04
CMTM1-201ENST00000328020 LRRC43Q8N309 656 aa15.33■□□□□ 0.04
CMTM1-201ENST00000328020 HELQQ8TDG4 1101 aa15.33■□□□□ 0.04
CMTM1-201ENST00000328020 FAM193BQ96PV7 902 aaPredicted RBP15.33■□□□□ 0.04
CMTM1-201ENST00000328020 PCIF1Q9H4Z3 704 aa15.33■□□□□ 0.04
CMTM1-201ENST00000328020 SLC38A7Q9NVC3 462 aa15.33■□□□□ 0.04
CMTM1-201ENST00000328020 COLQQ9Y215 455 aaPredicted RBP15.33■□□□□ 0.04
CMTM1-201ENST00000328020 INPP5FQ9Y2H2 1132 aa15.33■□□□□ 0.04
CMTM1-201ENST00000328020 RBAK-RBAKDNI3L0D1 243 aa15.32■□□□□ 0.04
CMTM1-201ENST00000328020 OFD1O75665 1012 aa15.32■□□□□ 0.04
CMTM1-201ENST00000328020 BMP6P22004 513 aa15.32■□□□□ 0.04
CMTM1-201ENST00000328020 ERCC5P28715 1186 aaPredicted RBP15.32■□□□□ 0.04
CMTM1-201ENST00000328020 MLH1P40692 756 aa15.32■□□□□ 0.04
CMTM1-201ENST00000328020 ACOT2P49753 483 aa15.32■□□□□ 0.04
CMTM1-201ENST00000328020 SMAD3P84022 425 aaKnown RBP15.32■□□□□ 0.04
CMTM1-201ENST00000328020 ADAM9Q13443 819 aa15.32■□□□□ 0.04
CMTM1-201ENST00000328020 SNRNP35Q16560 246 aaKnown RBP15.32■□□□□ 0.04
CMTM1-201ENST00000328020 TPD52L1Q16890 204 aaPredicted RBP15.32■□□□□ 0.04
CMTM1-201ENST00000328020 LRIT3Q3SXY7 679 aa15.32■□□□□ 0.04
CMTM1-201ENST00000328020 FIBCD1Q8N539 461 aa15.32■□□□□ 0.04
CMTM1-201ENST00000328020 SAAL1Q96ER3 474 aa15.32■□□□□ 0.04
CMTM1-201ENST00000328020 GAD1Q99259 594 aa15.32■□□□□ 0.04
CMTM1-201ENST00000328020 HAPLN2Q9GZV7 340 aa15.32■□□□□ 0.04
CMTM1-201ENST00000328020 RNF39Q9H2S5 420 aa15.32■□□□□ 0.04
CMTM1-201ENST00000328020 IKZF4Q9H2S9 585 aa15.32■□□□□ 0.04
CMTM1-201ENST00000328020 SEMA6BQ9H3T3 888 aa15.32■□□□□ 0.04
CMTM1-201ENST00000328020 ASB7Q9H672 318 aa15.32■□□□□ 0.04
CMTM1-201ENST00000328020 AAASQ9NRG9 546 aa15.32■□□□□ 0.04
CMTM1-201ENST00000328020 RBAKQ9NYW8 714 aaPredicted RBP15.32■□□□□ 0.04
CMTM1-201ENST00000328020 RWDD2AQ9UIY3 292 aa15.32■□□□□ 0.04
CMTM1-201ENST00000328020 CPSF3Q9UKF6 684 aaKnown RBP15.32■□□□□ 0.04
CMTM1-201ENST00000328020 CTNND2Q9UQB3 1225 aa15.32■□□□□ 0.04
CMTM1-201ENST00000328020 RWDD3Q9Y3V2 267 aa15.32■□□□□ 0.04
CMTM1-201ENST00000328020 TULP1O00294 542 aaPredicted RBP15.31■□□□□ 0.04
CMTM1-201ENST00000328020 INPPL1O15357 1258 aa15.31■□□□□ 0.04
CMTM1-201ENST00000328020 THP07101 528 aa15.31■□□□□ 0.04
CMTM1-201ENST00000328020 PSMC2P35998 433 aaKnown RBP15.31■□□□□ 0.04
CMTM1-201ENST00000328020 GRIK3Q13003 919 aa15.31■□□□□ 0.04
CMTM1-201ENST00000328020 DPCR1Q3MIW9 517 aa15.31■□□□□ 0.04
CMTM1-201ENST00000328020 ZCWPW2Q504Y3 356 aa15.31■□□□□ 0.04
CMTM1-201ENST00000328020 CLLU1OSQ5K130 101 aa15.31■□□□□ 0.04
CMTM1-201ENST00000328020 SPOUT1Q5T280 376 aaKnown RBP15.31■□□□□ 0.04
CMTM1-201ENST00000328020 CEP135Q66GS9 1140 aa15.31■□□□□ 0.04
CMTM1-201ENST00000328020 ANKRD40Q6AI12 368 aa15.31■□□□□ 0.04
CMTM1-201ENST00000328020 NT5DC4Q86YG4 428 aa15.31■□□□□ 0.04
CMTM1-201ENST00000328020 BRSK2Q8IWQ3 736 aa15.31■□□□□ 0.04
CMTM1-201ENST00000328020 CEP120Q8N960 986 aa15.31■□□□□ 0.04
CMTM1-201ENST00000328020 ZNF689Q96CS4 500 aaPredicted RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms