RNA–Protein interactions for RNA: ENST00000326956.11

SSBP3-201, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 2,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-201ENST00000326956 VSTM1Q6UX27 236 aa15.63■□□□□ 0.09
SSBP3-201ENST00000326956 SRRM1Q8IYB3 904 aaKnown RBP15.63■□□□□ 0.09
SSBP3-201ENST00000326956 MAB21L3Q8N8X9 362 aa15.63■□□□□ 0.09
SSBP3-201ENST00000326956 CERKQ8TCT0 537 aa15.63■□□□□ 0.09
SSBP3-201ENST00000326956 EPS8L1Q8TE68 723 aa15.63■□□□□ 0.09
SSBP3-201ENST00000326956 FIZ1Q96SL8 496 aa15.63■□□□□ 0.09
SSBP3-201ENST00000326956 TMEM206Q9H813 350 aa15.63■□□□□ 0.09
SSBP3-201ENST00000326956 UVRAGQ9P2Y5 699 aa15.63■□□□□ 0.09
SSBP3-201ENST00000326956 PI4KBQ9UBF8 816 aa15.63■□□□□ 0.09
SSBP3-201ENST00000326956 PNMA3Q9UL41 463 aa15.63■□□□□ 0.09
SSBP3-201ENST00000326956 A0A1W2PRG0 241 aa15.62■□□□□ 0.09
SSBP3-201ENST00000326956 PSMD10O75832 226 aa15.62■□□□□ 0.09
SSBP3-201ENST00000326956 MTA2O94776 668 aa15.62■□□□□ 0.09
SSBP3-201ENST00000326956 MFAP3P55082 362 aa15.62■□□□□ 0.09
SSBP3-201ENST00000326956 PPP3CAQ08209 521 aa15.62■□□□□ 0.09
SSBP3-201ENST00000326956 TRAF1Q13077 416 aa15.62■□□□□ 0.09
SSBP3-201ENST00000326956 MYBPC2Q14324 1141 aa15.62■□□□□ 0.09
SSBP3-201ENST00000326956 RASA3Q14644 834 aa15.62■□□□□ 0.09
SSBP3-201ENST00000326956 SETDB1Q15047 1291 aa15.62■□□□□ 0.09
SSBP3-201ENST00000326956 GALNTL6Q49A17 601 aa15.62■□□□□ 0.09
SSBP3-201ENST00000326956 TMEM179Q6ZVK1 233 aa15.62■□□□□ 0.09
SSBP3-201ENST00000326956 NOP9Q86U38 636 aaKnown RBP15.62■□□□□ 0.09
SSBP3-201ENST00000326956 C12orf50Q8NA57 414 aaPredicted RBP15.62■□□□□ 0.09
SSBP3-201ENST00000326956 KAT5Q92993 513 aa15.62■□□□□ 0.09
SSBP3-201ENST00000326956 L3MBTL3Q96JM7 780 aaPredicted RBP15.62■□□□□ 0.09
SSBP3-201ENST00000326956 RAB3IPQ96QF0 476 aaPredicted RBP15.62■□□□□ 0.09
SSBP3-201ENST00000326956 WDR11Q9BZH6 1224 aa15.62■□□□□ 0.09
SSBP3-201ENST00000326956 EHMT1Q9H9B1 1298 aa15.62■□□□□ 0.09
SSBP3-201ENST00000326956 GTF3C4Q9UKN8 822 aa15.62■□□□□ 0.09
SSBP3-201ENST00000326956 PPP2R5CQ13362 524 aa15.62■□□□□ 0.09
SSBP3-201ENST00000326956 ABCB5Q2M3G0 1257 aa15.62■□□□□ 0.09
SSBP3-201ENST00000326956 HHIPL2Q6UWX4 724 aa15.62■□□□□ 0.09
SSBP3-201ENST00000326956 PPP1R21Q6ZMI0 780 aa15.62■□□□□ 0.09
SSBP3-201ENST00000326956 CPNE8Q86YQ8 564 aa15.62■□□□□ 0.09
SSBP3-201ENST00000326956 CD101Q93033 1021 aa15.62■□□□□ 0.09
SSBP3-201ENST00000326956 ZNF577Q9BSK1 485 aa15.62■□□□□ 0.09
SSBP3-201ENST00000326956 WDR18Q9BV38 432 aa15.62■□□□□ 0.09
SSBP3-201ENST00000326956 IGLV3-22A0A075B6J6 115 aa15.61■□□□□ 0.09
SSBP3-201ENST00000326956 CHKAP35790 457 aa15.61■□□□□ 0.09
SSBP3-201ENST00000326956 ITGA8P53708 1063 aa15.61■□□□□ 0.09
SSBP3-201ENST00000326956 CAV1Q03135 178 aa15.61■□□□□ 0.09
SSBP3-201ENST00000326956 GRIPAP1Q4V328 841 aa15.61■□□□□ 0.09
SSBP3-201ENST00000326956 VSIG1Q86XK7 387 aa15.61■□□□□ 0.09
SSBP3-201ENST00000326956 FITM2Q8N6M3 262 aa15.61■□□□□ 0.09
SSBP3-201ENST00000326956 XXYLT1Q8NBI6 393 aa15.61■□□□□ 0.09
SSBP3-201ENST00000326956 ACCSQ96QU6 501 aa15.61■□□□□ 0.09
SSBP3-201ENST00000326956 LXNQ9BS40 222 aa15.61■□□□□ 0.09
SSBP3-201ENST00000326956 PITPNM3Q9BZ71 974 aa15.61■□□□□ 0.09
SSBP3-201ENST00000326956 GJB6O95452 261 aa15.61■□□□□ 0.09
SSBP3-201ENST00000326956 MAPK4P31152 587 aa15.61■□□□□ 0.09
SSBP3-201ENST00000326956 IL9RQ01113 521 aa15.61■□□□□ 0.09
SSBP3-201ENST00000326956 APOBEC3HQ6NTF7 200 aaKnown RBP15.61■□□□□ 0.09
SSBP3-201ENST00000326956 SYDE1Q6ZW31 735 aaPredicted RBP15.61■□□□□ 0.09
SSBP3-201ENST00000326956 ZNF365Q70YC5 407 aa15.61■□□□□ 0.09
SSBP3-201ENST00000326956 SLC47A2Q86VL8 602 aa15.61■□□□□ 0.09
SSBP3-201ENST00000326956 SPICE1Q8N0Z3 855 aa15.61■□□□□ 0.09
SSBP3-201ENST00000326956 MICAL1Q8TDZ2 1067 aa15.61■□□□□ 0.09
SSBP3-201ENST00000326956 KIFAP3Q92845 792 aa15.61■□□□□ 0.09
SSBP3-201ENST00000326956 GRAMD1AQ96CP6 724 aa15.61■□□□□ 0.09
SSBP3-201ENST00000326956 ETNK1Q9HBU6 452 aa15.61■□□□□ 0.09
SSBP3-201ENST00000326956 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.61■□□□□ 0.09
SSBP3-201ENST00000326956 MYH11P35749 1972 aa15.61■□□□□ 0.09
SSBP3-201ENST00000326956 A8MUI8 341 aa15.61■□□□□ 0.09
SSBP3-201ENST00000326956 GH1P01241 217 aa15.61■□□□□ 0.09
SSBP3-201ENST00000326956 ALADP13716 330 aa15.61■□□□□ 0.09
SSBP3-201ENST00000326956 ATP2A2P16615 1042 aaKnown RBP15.61■□□□□ 0.09
SSBP3-201ENST00000326956 MUTP22033 750 aa15.61■□□□□ 0.09
SSBP3-201ENST00000326956 SIX1Q15475 284 aaPredicted RBP15.61■□□□□ 0.09
SSBP3-201ENST00000326956 MAGEB18Q96M61 343 aa15.61■□□□□ 0.09
SSBP3-201ENST00000326956 TRAIPQ9BWF2 469 aa15.61■□□□□ 0.09
SSBP3-201ENST00000326956 TEKT3Q9BXF9 490 aa15.61■□□□□ 0.09
SSBP3-201ENST00000326956 ACP6Q9NPH0 428 aa15.61■□□□□ 0.09
SSBP3-201ENST00000326956 ARHGEF3Q9NR81 526 aa15.61■□□□□ 0.09
SSBP3-201ENST00000326956 TXLNGQ9NUQ3 528 aa15.61■□□□□ 0.09
SSBP3-201ENST00000326956 ZNF831Q5JPB2 1677 aa15.6■□□□□ 0.09
SSBP3-201ENST00000326956 FOXO6A8MYZ6 492 aa15.6■□□□□ 0.09
SSBP3-201ENST00000326956 DDX39AO00148 427 aaKnown RBP15.6■□□□□ 0.09
SSBP3-201ENST00000326956 PPEF1O14829 653 aaPredicted RBP15.6■□□□□ 0.09
SSBP3-201ENST00000326956 FSCN2O14926 492 aa15.6■□□□□ 0.09
SSBP3-201ENST00000326956 CDH16O75309 829 aa15.6■□□□□ 0.09
SSBP3-201ENST00000326956 CYP1A2P05177 515 aa15.6■□□□□ 0.09
SSBP3-201ENST00000326956 POLR2MP0CAP2 368 aa15.6■□□□□ 0.09
SSBP3-201ENST00000326956 CHRNB2P17787 502 aa15.6■□□□□ 0.09
SSBP3-201ENST00000326956 EPC2Q52LR7 807 aa15.6■□□□□ 0.09
SSBP3-201ENST00000326956 PADI6Q6TGC4 694 aa15.6■□□□□ 0.09
SSBP3-201ENST00000326956 FAM47EQ6ZV65 393 aa15.6■□□□□ 0.09
SSBP3-201ENST00000326956 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.6■□□□□ 0.096e-6■■■□□ 14.6
SSBP3-201ENST00000326956 ANKRD35Q8N283 1001 aa15.6■□□□□ 0.09
SSBP3-201ENST00000326956 ATG4AQ8WYN0 398 aa15.6■□□□□ 0.09
SSBP3-201ENST00000326956 GMCL1Q96IK5 515 aa15.6■□□□□ 0.09
SSBP3-201ENST00000326956 CBWD1Q9BRT8 395 aa15.6■□□□□ 0.09
SSBP3-201ENST00000326956 SLC24A3Q9HC58 644 aa15.6■□□□□ 0.09
SSBP3-201ENST00000326956 ANAPC7Q9UJX3 599 aa15.6■□□□□ 0.09
SSBP3-201ENST00000326956 TISP43B9A030 160 aa15.6■□□□□ 0.09
SSBP3-201ENST00000326956 CLGNO14967 610 aa15.6■□□□□ 0.09
SSBP3-201ENST00000326956 PDE6BP35913 854 aa15.6■□□□□ 0.09
SSBP3-201ENST00000326956 CRKP46108 304 aa15.6■□□□□ 0.09
SSBP3-201ENST00000326956 ALCAMQ13740 583 aa15.6■□□□□ 0.09
SSBP3-201ENST00000326956 BZW1Q7L1Q6 419 aaKnown RBP15.6■□□□□ 0.09
SSBP3-201ENST00000326956 ERICH1Q86X53 443 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms