RNA–Protein interactions for RNA: ENST00000326470.9

SSH1-201, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH1, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-201ENST00000326470 CLDN3O15551 220 aa17.9■□□□□ 0.46
SSH1-201ENST00000326470 CHMP2AO43633 222 aa17.9■□□□□ 0.46
SSH1-201ENST00000326470 BBOX1O75936 387 aa17.9■□□□□ 0.46
SSH1-201ENST00000326470 DLATP10515 647 aaKnown RBP17.9■□□□□ 0.46
SSH1-201ENST00000326470 STX2P32856 288 aa17.9■□□□□ 0.46
SSH1-201ENST00000326470 ZKSCAN8Q15776 578 aaPredicted RBP17.9■□□□□ 0.46
SSH1-201ENST00000326470 SHROOM1Q2M3G4 852 aaPredicted RBP17.9■□□□□ 0.46
SSH1-201ENST00000326470 SGO2Q562F6 1265 aa17.9■□□□□ 0.46
SSH1-201ENST00000326470 SYDE2Q5VT97 1194 aa17.9■□□□□ 0.46
SSH1-201ENST00000326470 LRCH2Q5VUJ6 765 aa17.9■□□□□ 0.46
SSH1-201ENST00000326470 SLC30A10Q6XR72 485 aa17.9■□□□□ 0.46
SSH1-201ENST00000326470 EP400NLQ6ZTU2 488 aa17.9■□□□□ 0.46
SSH1-201ENST00000326470 NOP9Q86U38 636 aaKnown RBP17.9■□□□□ 0.46
SSH1-201ENST00000326470 C1orf54Q8WWF1 131 aa17.9■□□□□ 0.46
SSH1-201ENST00000326470 PSPC1Q8WXF1 523 aaKnown RBP17.9■□□□□ 0.46
SSH1-201ENST00000326470 SNF8Q96H20 258 aa17.9■□□□□ 0.46
SSH1-201ENST00000326470 NACC1Q96RE7 527 aa17.9■□□□□ 0.46
SSH1-201ENST00000326470 WDR18Q9BV38 432 aa17.9■□□□□ 0.46
SSH1-201ENST00000326470 TRIM33Q9UPN9 1127 aa17.9■□□□□ 0.46
SSH1-201ENST00000326470 BCS1LQ9Y276 419 aa17.9■□□□□ 0.46
SSH1-201ENST00000326470 FOXO6A8MYZ6 492 aa17.9■□□□□ 0.46
SSH1-201ENST00000326470 MUTP22033 750 aa17.9■□□□□ 0.46
SSH1-201ENST00000326470 IVDP26440 423 aa17.9■□□□□ 0.46
SSH1-201ENST00000326470 VAMP7P51809 220 aa17.9■□□□□ 0.46
SSH1-201ENST00000326470 MGAT5Q09328 741 aa17.9■□□□□ 0.46
SSH1-201ENST00000326470 ACVR2BQ13705 512 aa17.9■□□□□ 0.46
SSH1-201ENST00000326470 MTFR1Q15390 333 aa17.9■□□□□ 0.46
SSH1-201ENST00000326470 KYNUQ16719 465 aa17.9■□□□□ 0.46
SSH1-201ENST00000326470 FAM196AQ6ZSG2 479 aa17.9■□□□□ 0.46
SSH1-201ENST00000326470 ARHGEF18Q6ZSZ5 1173 aa17.9■□□□□ 0.46
SSH1-201ENST00000326470 SYDE1Q6ZW31 735 aaPredicted RBP17.9■□□□□ 0.46
SSH1-201ENST00000326470 SIAH1Q8IUQ4 282 aa17.9■□□□□ 0.46
SSH1-201ENST00000326470 FAM71AQ8IYT1 594 aa17.9■□□□□ 0.46
SSH1-201ENST00000326470 GRAMD1AQ96CP6 724 aa17.9■□□□□ 0.46
SSH1-201ENST00000326470 PLVAPQ9BX97 442 aa17.9■□□□□ 0.46
SSH1-201ENST00000326470 UVRAGQ9P2Y5 699 aa17.9■□□□□ 0.46
SSH1-201ENST00000326470 LGALS13Q9UHV8 139 aa17.9■□□□□ 0.46
SSH1-201ENST00000326470 GTF3C4Q9UKN8 822 aa17.9■□□□□ 0.46
SSH1-201ENST00000326470 TAF1LQ8IZX4 1826 aa17.9■□□□□ 0.46
SSH1-201ENST00000326470 WFS1O76024 890 aa17.89■□□□□ 0.45
SSH1-201ENST00000326470 UNC5CO95185 931 aa17.89■□□□□ 0.45
SSH1-201ENST00000326470 ATP2A2P16615 1042 aaKnown RBP17.89■□□□□ 0.45
SSH1-201ENST00000326470 TAL1P17542 331 aaPredicted RBP17.89■□□□□ 0.45
SSH1-201ENST00000326470 NFIAQ12857 509 aa17.89■□□□□ 0.45
SSH1-201ENST00000326470 KAT5Q92993 513 aa17.89■□□□□ 0.45
SSH1-201ENST00000326470 ADGRA3Q8IWK6 1321 aa17.89■□□□□ 0.45
SSH1-201ENST00000326470 F5H6K3 240 aa17.89■□□□□ 0.45
SSH1-201ENST00000326470 PIK3CDO00329 1044 aa17.89■□□□□ 0.45
SSH1-201ENST00000326470 PPP1R12AO14974 1030 aaPredicted RBP17.89■□□□□ 0.45
SSH1-201ENST00000326470 GCLMP48507 274 aa17.89■□□□□ 0.45
SSH1-201ENST00000326470 PRELPP51888 382 aa17.89■□□□□ 0.45
SSH1-201ENST00000326470 CAV1Q03135 178 aa17.89■□□□□ 0.45
SSH1-201ENST00000326470 PTK6Q13882 451 aa17.89■□□□□ 0.45
SSH1-201ENST00000326470 ANKLE1Q8NAG6 615 aa17.89■□□□□ 0.45
SSH1-201ENST00000326470 THAP12O43422 761 aa17.88■□□□□ 0.45
SSH1-201ENST00000326470 MKRN4PQ13434 485 aaPredicted RBP17.88■□□□□ 0.45
SSH1-201ENST00000326470 CERKLQ49MI3 558 aaPredicted RBP17.88■□□□□ 0.45
SSH1-201ENST00000326470 SLC27A3Q5K4L6 730 aa17.88■□□□□ 0.45
SSH1-201ENST00000326470 ANKRD20A2Q5SQ80 823 aa17.88■□□□□ 0.45
SSH1-201ENST00000326470 ANKRD20A1Q5TYW2 823 aa17.88■□□□□ 0.45
SSH1-201ENST00000326470 ANKRD20A3Q5VUR7 823 aa17.88■□□□□ 0.45
SSH1-201ENST00000326470 ECHDC2Q86YB7 292 aa17.88■□□□□ 0.45
SSH1-201ENST00000326470 ZFPM1Q8IX07 1006 aa17.88■□□□□ 0.45
SSH1-201ENST00000326470 CYP4X1Q8N118 509 aa17.88■□□□□ 0.45
SSH1-201ENST00000326470 SLC5A5Q92911 643 aa17.88■□□□□ 0.45
SSH1-201ENST00000326470 ZNF653Q96CK0 615 aa17.88■□□□□ 0.45
SSH1-201ENST00000326470 COA1Q9GZY4 146 aa17.88■□□□□ 0.45
SSH1-201ENST00000326470 NKIRAS1Q9NYS0 192 aa17.88■□□□□ 0.45
SSH1-201ENST00000326470 WRAP73Q9P2S5 460 aaPredicted RBP17.88■□□□□ 0.45
SSH1-201ENST00000326470 LIN7AO14910 233 aaPredicted RBP17.88■□□□□ 0.45
SSH1-201ENST00000326470 SKAP2O75563 359 aaPredicted RBP17.88■□□□□ 0.45
SSH1-201ENST00000326470 POTEJP0CG39 1038 aa17.88■□□□□ 0.45
SSH1-201ENST00000326470 MAN1A1P33908 653 aa17.88■□□□□ 0.45
SSH1-201ENST00000326470 SCNN1DP51172 638 aa17.88■□□□□ 0.45
SSH1-201ENST00000326470 ITGA8P53708 1063 aa17.88■□□□□ 0.45
SSH1-201ENST00000326470 FMO1Q01740 532 aa17.88■□□□□ 0.45
SSH1-201ENST00000326470 STRN3Q13033 797 aa17.88■□□□□ 0.45
SSH1-201ENST00000326470 IKQ13123 557 aaPredicted RBP17.88■□□□□ 0.45
SSH1-201ENST00000326470 SNX1Q13596 522 aa17.88■□□□□ 0.45
SSH1-201ENST00000326470 C1orf220Q5T0J3 134 aa17.88■□□□□ 0.45
SSH1-201ENST00000326470 APOBEC3HQ6NTF7 200 aaKnown RBP17.88■□□□□ 0.45
SSH1-201ENST00000326470 PPP1R21Q6ZMI0 780 aa17.88■□□□□ 0.45
SSH1-201ENST00000326470 TMEM174Q8WUU8 243 aa17.88■□□□□ 0.45
SSH1-201ENST00000326470 SPDL1Q96EA4 605 aa17.88■□□□□ 0.45
SSH1-201ENST00000326470 RAB3IPQ96QF0 476 aaPredicted RBP17.88■□□□□ 0.45
SSH1-201ENST00000326470 NINJ2Q9NZG7 142 aa17.88■□□□□ 0.45
SSH1-201ENST00000326470 ACTL7BQ9Y614 415 aa17.88■□□□□ 0.45
SSH1-201ENST00000326470 FAM196BA6NMK8 535 aa17.87■□□□□ 0.45
SSH1-201ENST00000326470 CDH16O75309 829 aa17.87■□□□□ 0.45
SSH1-201ENST00000326470 SMNDC1O75940 238 aaKnown RBP eCLIP17.87■□□□□ 0.45
SSH1-201ENST00000326470 TAC1P20366 129 aa17.87■□□□□ 0.45
SSH1-201ENST00000326470 RASA3Q14644 834 aa17.87■□□□□ 0.45
SSH1-201ENST00000326470 LLGL1Q15334 1064 aa17.87■□□□□ 0.45
SSH1-201ENST00000326470 SLC47A2Q86VL8 602 aa17.87■□□□□ 0.45
SSH1-201ENST00000326470 FBF1Q8TES7 1133 aa17.87■□□□□ 0.45
SSH1-201ENST00000326470 GMCL1Q96IK5 515 aa17.87■□□□□ 0.45
SSH1-201ENST00000326470 ANKRD27Q96NW4 1050 aa17.87■□□□□ 0.45
SSH1-201ENST00000326470 TRAIPQ9BWF2 469 aa17.87■□□□□ 0.45
SSH1-201ENST00000326470 PCIF1Q9H4Z3 704 aa17.87■□□□□ 0.45
SSH1-201ENST00000326470 ETNK1Q9HBU6 452 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms