RNA–Protein interactions for RNA: ENST00000324106.8

CD28-201, Transcript of CD28 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD28, Length 4,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-201ENST00000324106 KANSL3Q9P2N6 904 aa9.51□□□□□ -0.89
CD28-201ENST00000324106 SUN2Q9UH99 717 aa9.51□□□□□ -0.89
CD28-201ENST00000324106 IPPQ9Y573 584 aa9.51□□□□□ -0.89
CD28-201ENST00000324106 FAM205AQ6ZU69 1335 aa9.51□□□□□ -0.89
CD28-201ENST00000324106 NWD1Q149M9 1564 aa9.51□□□□□ -0.89
CD28-201ENST00000324106 EXOC1LA0A1B0GW35 172 aa9.51□□□□□ -0.89
CD28-201ENST00000324106 PDHXO00330 501 aa9.51□□□□□ -0.89
CD28-201ENST00000324106 CABYRO75952 493 aa9.51□□□□□ -0.89
CD28-201ENST00000324106 HARS2P49590 506 aaKnown RBP9.51□□□□□ -0.89
CD28-201ENST00000324106 ARL4DP49703 201 aa9.51□□□□□ -0.89
CD28-201ENST00000324106 RPL10AP62906 217 aaKnown RBP9.51□□□□□ -0.89
CD28-201ENST00000324106 NBPF12Q5TAG4 269 aaPredicted RBP9.51□□□□□ -0.89
CD28-201ENST00000324106 LMNTD2Q8IXW0 634 aa9.51□□□□□ -0.89
CD28-201ENST00000324106 TTC8Q8TAM2 541 aa9.51□□□□□ -0.89
CD28-201ENST00000324106 RMDN1Q96DB5 314 aa9.51□□□□□ -0.89
CD28-201ENST00000324106 MTG1Q9BT17 334 aaPredicted RBP9.51□□□□□ -0.89
CD28-201ENST00000324106 HTATIP2Q9BUP3 242 aa9.51□□□□□ -0.89
CD28-201ENST00000324106 SPATC1LQ9H0A9 340 aa9.51□□□□□ -0.89
CD28-201ENST00000324106 KIAA1683Q9H0B3 1180 aa9.51□□□□□ -0.89
CD28-201ENST00000324106 HSPBP1Q9NZL4 362 aa9.51□□□□□ -0.89
CD28-201ENST00000324106 PRG3Q9Y2Y8 225 aaPredicted RBP9.51□□□□□ -0.89
CD28-201ENST00000324106 CFAP99D6REC4 459 aa9.51□□□□□ -0.89
CD28-201ENST00000324106 POLRMTO00411 1230 aaKnown RBP9.51□□□□□ -0.89
CD28-201ENST00000324106 FTCDO95954 541 aa9.51□□□□□ -0.89
CD28-201ENST00000324106 KCNA4P22459 653 aa9.51□□□□□ -0.89
CD28-201ENST00000324106 HOXA10P31260 410 aaPredicted RBP9.51□□□□□ -0.89
CD28-201ENST00000324106 OAZ1P54368 228 aa9.51□□□□□ -0.89
CD28-201ENST00000324106 EIF3BP55884 814 aaKnown RBP9.51□□□□□ -0.89
CD28-201ENST00000324106 TPI1P60174 286 aa9.51□□□□□ -0.89
CD28-201ENST00000324106 ACTR2P61160 394 aa9.51□□□□□ -0.89
CD28-201ENST00000324106 ADCY1Q08828 1119 aa9.51□□□□□ -0.89
CD28-201ENST00000324106 FGD4Q96M96 766 aa9.51□□□□□ -0.89
CD28-201ENST00000324106 FHDC1Q9C0D6 1143 aaPredicted RBP9.51□□□□□ -0.89
CD28-201ENST00000324106 PLEKHA4Q9H4M7 779 aa9.51□□□□□ -0.89
CD28-201ENST00000324106 OLA1Q9NTK5 396 aaKnown RBP9.51□□□□□ -0.89
CD28-201ENST00000324106 PITPNM2Q9BZ72 1349 aa9.5□□□□□ -0.89
CD28-201ENST00000324106 IL1R1P14778 569 aa9.5□□□□□ -0.89
CD28-201ENST00000324106 PRCPP42785 496 aa9.5□□□□□ -0.89
CD28-201ENST00000324106 DR1Q01658 176 aa9.5□□□□□ -0.89
CD28-201ENST00000324106 TAF11Q15544 211 aa9.5□□□□□ -0.89
CD28-201ENST00000324106 SHCBP1Q8NEM2 672 aa9.5□□□□□ -0.89
CD28-201ENST00000324106 UHMK1Q8TAS1 419 aaKnown RBP9.5□□□□□ -0.89
CD28-201ENST00000324106 ZNF564Q8TBZ8 553 aaPredicted RBP9.5□□□□□ -0.89
CD28-201ENST00000324106 ALKBH8Q96BT7 664 aaKnown RBP9.5□□□□□ -0.89
CD28-201ENST00000324106 MKNK1Q9BUB5 465 aa9.5□□□□□ -0.89
CD28-201ENST00000324106 VTA1Q9NP79 307 aa9.5□□□□□ -0.89
CD28-201ENST00000324106 CYP11B2P19099 503 aa9.5□□□□□ -0.89
CD28-201ENST00000324106 INPP5BP32019 993 aa9.5□□□□□ -0.89
CD28-201ENST00000324106 RAB27AP51159 221 aa9.5□□□□□ -0.89
CD28-201ENST00000324106 EXOSC10Q01780 885 aaKnown RBP9.5□□□□□ -0.89
CD28-201ENST00000324106 EDRF1Q3B7T1 1238 aa9.5□□□□□ -0.89
CD28-201ENST00000324106 CHADLQ6NUI6 762 aa9.5□□□□□ -0.89
CD28-201ENST00000324106 SPATS2Q86XZ4 545 aaKnown RBP9.5□□□□□ -0.89
CD28-201ENST00000324106 RNF10Q8N5U6 811 aaKnown RBP9.5□□□□□ -0.89
CD28-201ENST00000324106 IGDCC4Q8TDY8 1250 aa9.5□□□□□ -0.89
CD28-201ENST00000324106 PBXIP1Q96AQ6 731 aa9.5□□□□□ -0.89
CD28-201ENST00000324106 PHF20Q9BVI0 1012 aa9.5□□□□□ -0.89
CD28-201ENST00000324106 ABCF3Q9NUQ8 709 aa9.5□□□□□ -0.89
CD28-201ENST00000324106 INTS9Q9NV88 658 aaKnown RBP9.5□□□□□ -0.89
CD28-201ENST00000324106 EPS15L1Q9UBC2 864 aa9.5□□□□□ -0.89
CD28-201ENST00000324106 DSEQ9UL01 958 aa9.5□□□□□ -0.89
CD28-201ENST00000324106 ZMYM2Q9UBW7 1377 aa9.5□□□□□ -0.89
CD28-201ENST00000324106 A0A087WWV3 80 aa9.5□□□□□ -0.89
CD28-201ENST00000324106 GOLGA8MH3BSY2 632 aa9.5□□□□□ -0.89
CD28-201ENST00000324106 HGSO14964 777 aaPredicted RBP9.5□□□□□ -0.89
CD28-201ENST00000324106 CYP2C8P10632 490 aa9.5□□□□□ -0.89
CD28-201ENST00000324106 CCT5P48643 541 aa9.5□□□□□ -0.89
CD28-201ENST00000324106 TDRD10Q5VZ19 366 aaKnown RBP9.5□□□□□ -0.89
CD28-201ENST00000324106 TTC19Q6DKK2 380 aaPredicted RBP9.5□□□□□ -0.89
CD28-201ENST00000324106 CLEC10AQ8IUN9 316 aa9.5□□□□□ -0.89
CD28-201ENST00000324106 RSRC1Q96IZ7 334 aaKnown RBP9.5□□□□□ -0.89
CD28-201ENST00000324106 POLR3CQ9BUI4 534 aaPredicted RBP9.5□□□□□ -0.89
CD28-201ENST00000324106 EFHD1Q9BUP0 239 aa9.5□□□□□ -0.89
CD28-201ENST00000324106 TRIM9Q9C026 710 aa9.5□□□□□ -0.89
CD28-201ENST00000324106 RNF208Q9H0X6 261 aa9.5□□□□□ -0.89
CD28-201ENST00000324106 FAM96AQ9H5X1 160 aa9.5□□□□□ -0.89
CD28-201ENST00000324106 PCSK1NQ9UHG2 260 aa9.5□□□□□ -0.89
CD28-201ENST00000324106 LTBP4Q8N2S1 1624 aa9.5□□□□□ -0.89
CD28-201ENST00000324106 MFAP3LO75121 409 aa9.49□□□□□ -0.89
CD28-201ENST00000324106 RALBP11234 206 aa9.49□□□□□ -0.89
CD28-201ENST00000324106 ARHGEF7Q14155 803 aa9.49□□□□□ -0.89
CD28-201ENST00000324106 NFE2Q16621 373 aaPredicted RBP9.49□□□□□ -0.89
CD28-201ENST00000324106 C11orf57Q6ZUT1 292 aaPredicted RBP9.49□□□□□ -0.89
CD28-201ENST00000324106 GMCL1P1Q8NEA9 526 aa9.49□□□□□ -0.89
CD28-201ENST00000324106 DDX27Q96GQ7 796 aaKnown RBP9.49□□□□□ -0.89
CD28-201ENST00000324106 TAAR1Q96RJ0 339 aa9.49□□□□□ -0.89
CD28-201ENST00000324106 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.49□□□□□ -0.89
CD28-201ENST00000324106 EIF3DO15371 548 aaKnown RBP eCLIP9.49□□□□□ -0.89
CD28-201ENST00000324106 P4HA2O15460 535 aa9.49□□□□□ -0.89
CD28-201ENST00000324106 SUN1O94901 812 aa9.49□□□□□ -0.89
CD28-201ENST00000324106 ESRRBO95718 433 aa9.49□□□□□ -0.89
CD28-201ENST00000324106 VCAM1P19320 739 aa9.49□□□□□ -0.89
CD28-201ENST00000324106 NBPF9Q3BBW0 867 aa9.49□□□□□ -0.89
CD28-201ENST00000324106 EFHC1Q5JVL4 640 aa9.49□□□□□ -0.89
CD28-201ENST00000324106 OR6P1Q8NGX9 317 aa9.49□□□□□ -0.89
CD28-201ENST00000324106 WHAMMQ8TF30 809 aa9.49□□□□□ -0.89
CD28-201ENST00000324106 SNX19Q92543 992 aa9.49□□□□□ -0.89
CD28-201ENST00000324106 CCDC124Q96CT7 223 aaKnown RBP9.49□□□□□ -0.89
CD28-201ENST00000324106 FMO2Q99518 471 aa9.49□□□□□ -0.89
CD28-201ENST00000324106 GLIS2Q9BZE0 524 aaPredicted RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms