RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 CYP11B2P19099 503 aa13.64□□□□□ -0.23
TPM3-204ENST00000323144 RBM25P49756 843 aaKnown RBP13.64□□□□□ -0.23
TPM3-204ENST00000323144 NCBP1Q09161 790 aaKnown RBP13.64□□□□□ -0.23
TPM3-204ENST00000323144 PRPF4BQ13523 1007 aaKnown RBP13.64□□□□□ -0.23
TPM3-204ENST00000323144 HSP90AA2PQ14568 343 aaPredicted RBP13.64□□□□□ -0.23
TPM3-204ENST00000323144 NAB2Q15742 525 aa13.64□□□□□ -0.23
TPM3-204ENST00000323144 TMEM132AQ24JP5 1023 aa13.64□□□□□ -0.23
TPM3-204ENST00000323144 GLRA4Q5JXX5 417 aa13.64□□□□□ -0.23
TPM3-204ENST00000323144 SPATA31D4Q6ZUB0 917 aa13.64□□□□□ -0.23
TPM3-204ENST00000323144 ZDHHC14Q8IZN3 488 aa13.64□□□□□ -0.23
TPM3-204ENST00000323144 DEPTORQ8TB45 409 aa13.64□□□□□ -0.23
TPM3-204ENST00000323144 C2orf40Q9H1Z8 148 aa13.64□□□□□ -0.23
TPM3-204ENST00000323144 RXFP1Q9HBX9 757 aa13.64□□□□□ -0.23
TPM3-204ENST00000323144 DDX19AQ9NUU7 478 aaKnown RBP13.64□□□□□ -0.23
TPM3-204ENST00000323144 STK39Q9UEW8 545 aa13.64□□□□□ -0.23
TPM3-204ENST00000323144 NOL7Q9UMY1 257 aaKnown RBP13.64□□□□□ -0.23
TPM3-204ENST00000323144 PHLPP2Q6ZVD8 1323 aa13.64□□□□□ -0.23
TPM3-204ENST00000323144 PATJQ8NI35 1801 aa13.63□□□□□ -0.23
TPM3-204ENST00000323144 EIF5BO60841 1220 aaKnown RBP13.63□□□□□ -0.23
TPM3-204ENST00000323144 XRCC6P12956 609 aaKnown RBP eCLIP13.63□□□□□ -0.239e-13■□□□□ 8.6
TPM3-204ENST00000323144 IGFBP6P24592 240 aaPredicted RBP13.63□□□□□ -0.23
TPM3-204ENST00000323144 U2AF2P26368 475 aaKnown RBP eCLIP13.63□□□□□ -0.235e-7■■■■□ 22.9
TPM3-204ENST00000323144 TRAPPC10P48553 1259 aa13.63□□□□□ -0.23
TPM3-204ENST00000323144 TUSC3Q13454 348 aa13.63□□□□□ -0.23
TPM3-204ENST00000323144 IL17AQ16552 155 aa13.63□□□□□ -0.23
TPM3-204ENST00000323144 MAPK6Q16659 721 aa13.63□□□□□ -0.23
TPM3-204ENST00000323144 ATAT1Q5SQI0 421 aa13.63□□□□□ -0.23
TPM3-204ENST00000323144 CWF19L1Q69YN2 538 aaKnown RBP13.63□□□□□ -0.23
TPM3-204ENST00000323144 KCNK18Q7Z418 384 aa13.63□□□□□ -0.23
TPM3-204ENST00000323144 DAW1Q8N136 415 aa13.63□□□□□ -0.23
TPM3-204ENST00000323144 CEP120Q8N960 986 aa13.63□□□□□ -0.23
TPM3-204ENST00000323144 IGSF22Q8N9C0 903 aa13.63□□□□□ -0.23
TPM3-204ENST00000323144 CMASQ8NFW8 434 aaPredicted RBP13.63□□□□□ -0.23
TPM3-204ENST00000323144 RIN2Q8WYP3 895 aaPredicted RBP13.63□□□□□ -0.23
TPM3-204ENST00000323144 ZNF707Q96C28 371 aaPredicted RBP13.63□□□□□ -0.23
TPM3-204ENST00000323144 ZSCAN31Q96LW9 406 aaPredicted RBP13.63□□□□□ -0.23
TPM3-204ENST00000323144 RUSC1Q9BVN2 902 aa13.63□□□□□ -0.23
TPM3-204ENST00000323144 CHST7Q9NS84 486 aa13.63□□□□□ -0.23
TPM3-204ENST00000323144 LRWD1Q9UFC0 647 aa13.63□□□□□ -0.23
TPM3-204ENST00000323144 LIMD1Q9UGP4 676 aa13.63□□□□□ -0.23
TPM3-204ENST00000323144 KIAA1024Q9UPX6 916 aa13.63□□□□□ -0.23
TPM3-204ENST00000323144 GDAQ9Y2T3 454 aa13.63□□□□□ -0.23
TPM3-204ENST00000323144 ANK1P16157 1881 aa13.63□□□□□ -0.23
TPM3-204ENST00000323144 SF3B1O75533 1304 aaKnown RBP eCLIP13.63□□□□□ -0.237e-7■■■■■ 108.6
TPM3-204ENST00000323144 NOTCH4Q99466 2003 aa13.63□□□□□ -0.23
TPM3-204ENST00000323144 COL4A2P08572 1712 aa13.62□□□□□ -0.23
TPM3-204ENST00000323144 E9PMD0 336 aa13.62□□□□□ -0.23
TPM3-204ENST00000323144 TGM5O43548 720 aa13.62□□□□□ -0.23
TPM3-204ENST00000323144 CDC25AP30304 524 aa13.62□□□□□ -0.23
TPM3-204ENST00000323144 MAPK7Q13164 816 aa13.62□□□□□ -0.23
TPM3-204ENST00000323144 PTGDRQ13258 359 aa13.62□□□□□ -0.23
TPM3-204ENST00000323144 NT5DC1Q5TFE4 455 aa13.62□□□□□ -0.23
TPM3-204ENST00000323144 C15orf39Q6ZRI6 1047 aa13.62□□□□□ -0.23
TPM3-204ENST00000323144 TAS1R3Q7RTX0 852 aa13.62□□□□□ -0.23
TPM3-204ENST00000323144 PALB2Q86YC2 1186 aa13.62□□□□□ -0.23
TPM3-204ENST00000323144 UBALD2Q8IYN6 164 aa13.62□□□□□ -0.23
TPM3-204ENST00000323144 TMEM105Q8N8V8 129 aa13.62□□□□□ -0.23
TPM3-204ENST00000323144 MMTAG2Q9BU76 263 aaKnown RBP13.62□□□□□ -0.23
TPM3-204ENST00000323144 COLEC11Q9BWP8 271 aa13.62□□□□□ -0.23
TPM3-204ENST00000323144 GOLGA2P5Q9HBQ8 144 aa13.62□□□□□ -0.23
TPM3-204ENST00000323144 USTQ9Y2C2 406 aa13.62□□□□□ -0.23
TPM3-204ENST00000323144 MIA3Q5JRA6 1907 aa13.62□□□□□ -0.23
TPM3-204ENST00000323144 PIEZO1Q92508 2521 aa13.61□□□□□ -0.23
TPM3-204ENST00000323144 USP34Q70CQ2 3546 aa13.61□□□□□ -0.23
TPM3-204ENST00000323144 CCDC195A0A1B0GUA6 201 aa13.61□□□□□ -0.23
TPM3-204ENST00000323144 ACKR2O00590 384 aa13.61□□□□□ -0.23
TPM3-204ENST00000323144 ADAM12O43184 909 aa13.61□□□□□ -0.23
TPM3-204ENST00000323144 NARSO43776 548 aaKnown RBP13.61□□□□□ -0.23
TPM3-204ENST00000323144 HIP1RO75146 1068 aa13.61□□□□□ -0.23
TPM3-204ENST00000323144 PTPN5P54829 565 aa13.61□□□□□ -0.23
TPM3-204ENST00000323144 PPP2R5AQ15172 486 aa13.61□□□□□ -0.23
TPM3-204ENST00000323144 USP41Q3LFD5 358 aa13.61□□□□□ -0.23
TPM3-204ENST00000323144 ATF7IP2Q5U623 682 aa13.61□□□□□ -0.23
TPM3-204ENST00000323144 GET4Q7L5D6 327 aaPredicted RBP13.61□□□□□ -0.23
TPM3-204ENST00000323144 C3orf58Q8NDZ4 430 aa13.61□□□□□ -0.23
TPM3-204ENST00000323144 RSAD2Q8WXG1 361 aa13.61□□□□□ -0.23
TPM3-204ENST00000323144 SMG7Q92540 1137 aaKnown RBP13.61□□□□□ -0.23
TPM3-204ENST00000323144 MYADMQ96S97 322 aa13.61□□□□□ -0.23
TPM3-204ENST00000323144 ADPGKQ9BRR6 497 aa13.61□□□□□ -0.23
TPM3-204ENST00000323144 CDT1Q9H211 546 aa13.61□□□□□ -0.23
TPM3-204ENST00000323144 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.61□□□□□ -0.23
TPM3-204ENST00000323144 FBXW11Q9UKB1 542 aa13.61□□□□□ -0.23
TPM3-204ENST00000323144 NR1I2O75469 434 aa13.6□□□□□ -0.23
TPM3-204ENST00000323144 MUTP22033 750 aa13.6□□□□□ -0.23
TPM3-204ENST00000323144 AVPR2P30518 371 aa13.6□□□□□ -0.23
TPM3-204ENST00000323144 PEX3P56589 373 aa13.6□□□□□ -0.23
TPM3-204ENST00000323144 PSMD5Q16401 504 aa13.6□□□□□ -0.23
TPM3-204ENST00000323144 DCAF4L1Q3SXM0 396 aa13.6□□□□□ -0.23
TPM3-204ENST00000323144 ZNF568Q3ZCX4 644 aa13.6□□□□□ -0.23
TPM3-204ENST00000323144 OTOP3Q7RTS5 596 aa13.6□□□□□ -0.23
TPM3-204ENST00000323144 ST13P5Q8NFI4 369 aaPredicted RBP13.6□□□□□ -0.23
TPM3-204ENST00000323144 KIFAP3Q92845 792 aa13.6□□□□□ -0.23
TPM3-204ENST00000323144 ACSF2Q96CM8 615 aaPredicted RBP13.6□□□□□ -0.23
TPM3-204ENST00000323144 WDR6Q9NNW5 1121 aaKnown RBP13.6□□□□□ -0.23
TPM3-204ENST00000323144 DUSP12Q9UNI6 340 aa13.6□□□□□ -0.23
TPM3-204ENST00000323144 SSX2IPQ9Y2D8 614 aa13.6□□□□□ -0.23
TPM3-204ENST00000323144 I3L4J1 428 aa13.59□□□□□ -0.23
TPM3-204ENST00000323144 MEFVO15553 781 aaPredicted RBP13.59□□□□□ -0.23
TPM3-204ENST00000323144 TADA2AO75478 443 aa13.59□□□□□ -0.23
TPM3-204ENST00000323144 THP07101 528 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms