RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 KDM3BQ7LBC6 1761 aa11.75□□□□□ -0.53
TOP3A-201ENST00000321105 ATP2A2P16615 1042 aaKnown RBP11.75□□□□□ -0.53
TOP3A-201ENST00000321105 ZSCAN20P17040 1043 aaPredicted RBP11.75□□□□□ -0.53
TOP3A-201ENST00000321105 NR1D1P20393 614 aa11.75□□□□□ -0.53
TOP3A-201ENST00000321105 PLA2G4AP47712 749 aa11.75□□□□□ -0.53
TOP3A-201ENST00000321105 GUCY1A3Q02108 690 aa11.75□□□□□ -0.53
TOP3A-201ENST00000321105 PPP3CAQ08209 521 aa11.75□□□□□ -0.53
TOP3A-201ENST00000321105 TRAPPC11Q7Z392 1133 aa11.75□□□□□ -0.53
TOP3A-201ENST00000321105 TAS2R14Q9NYV8 317 aa11.75□□□□□ -0.53
TOP3A-201ENST00000321105 KLK14Q9P0G3 267 aa11.75□□□□□ -0.53
TOP3A-201ENST00000321105 RNF14Q9UBS8 474 aa11.75□□□□□ -0.53
TOP3A-201ENST00000321105 PNMA3Q9UL41 463 aa11.75□□□□□ -0.53
TOP3A-201ENST00000321105 SIK3Q9Y2K2 1263 aa11.75□□□□□ -0.53
TOP3A-201ENST00000321105 REXO2Q9Y3B8 237 aaKnown RBP11.75□□□□□ -0.53
TOP3A-201ENST00000321105 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.75□□□□□ -0.53
TOP3A-201ENST00000321105 SLIT2O94813 1529 aa11.75□□□□□ -0.53
TOP3A-201ENST00000321105 LRRIQ3A6PVS8 624 aaPredicted RBP11.75□□□□□ -0.53
TOP3A-201ENST00000321105 EZRP15311 586 aaKnown RBP11.75□□□□□ -0.53
TOP3A-201ENST00000321105 BRD2P25440 801 aaKnown RBP11.75□□□□□ -0.53
TOP3A-201ENST00000321105 ADORA2BP29275 332 aa11.75□□□□□ -0.53
TOP3A-201ENST00000321105 NLRP11P59045 1033 aaKnown RBP11.75□□□□□ -0.53
TOP3A-201ENST00000321105 YWHAEP62258 255 aaKnown RBP11.75□□□□□ -0.53
TOP3A-201ENST00000321105 IRX4P78413 519 aa11.75□□□□□ -0.53
TOP3A-201ENST00000321105 ITGB3BPQ13352 177 aaPredicted RBP11.75□□□□□ -0.53
TOP3A-201ENST00000321105 KIZQ2M2Z5 673 aa11.75□□□□□ -0.53
TOP3A-201ENST00000321105 HHATQ5VTY9 493 aa11.75□□□□□ -0.53
TOP3A-201ENST00000321105 DAB2IPQ5VWQ8 1189 aa11.75□□□□□ -0.53
TOP3A-201ENST00000321105 C1orf186Q6ZWK4 172 aa11.75□□□□□ -0.53
TOP3A-201ENST00000321105 ARHGEF19Q8IW93 802 aa11.75□□□□□ -0.53
TOP3A-201ENST00000321105 ANKRD13AQ8IZ07 590 aa11.75□□□□□ -0.53
TOP3A-201ENST00000321105 SLC16A3O15427 465 aaKnown RBP11.74□□□□□ -0.53
TOP3A-201ENST00000321105 LDHAP00338 332 aaKnown RBP11.74□□□□□ -0.53
TOP3A-201ENST00000321105 MAGOHP61326 146 aaKnown RBP11.74□□□□□ -0.53
TOP3A-201ENST00000321105 TMED2Q15363 201 aa11.74□□□□□ -0.53
TOP3A-201ENST00000321105 AADACL2Q6P093 401 aa11.74□□□□□ -0.53
TOP3A-201ENST00000321105 MOXD1Q6UVY6 613 aa11.74□□□□□ -0.53
TOP3A-201ENST00000321105 B4GALNT4Q76KP1 1039 aa11.74□□□□□ -0.53
TOP3A-201ENST00000321105 RBBP8NLQ8NC74 664 aaPredicted RBP11.74□□□□□ -0.53
TOP3A-201ENST00000321105 SLC38A10Q9HBR0 1119 aa11.74□□□□□ -0.53
TOP3A-201ENST00000321105 INTS9Q9NV88 658 aaKnown RBP11.74□□□□□ -0.53
TOP3A-201ENST00000321105 A0A1W2PQJ5 194 aa11.74□□□□□ -0.53
TOP3A-201ENST00000321105 OATP04181 439 aa11.74□□□□□ -0.53
TOP3A-201ENST00000321105 C6orf222P0C671 652 aaPredicted RBP11.74□□□□□ -0.53
TOP3A-201ENST00000321105 MAN1A1P33908 653 aa11.74□□□□□ -0.53
TOP3A-201ENST00000321105 EMBQ6PCB8 327 aa11.74□□□□□ -0.53
TOP3A-201ENST00000321105 APBB1IPQ7Z5R6 666 aaPredicted RBP11.74□□□□□ -0.53
TOP3A-201ENST00000321105 UBA3Q8TBC4 463 aa11.74□□□□□ -0.53
TOP3A-201ENST00000321105 HSD17B14Q9BPX1 270 aa11.74□□□□□ -0.53
TOP3A-201ENST00000321105 NACA2Q9H009 215 aa11.74□□□□□ -0.53
TOP3A-201ENST00000321105 NSRP1Q9H0G5 558 aaKnown RBP11.74□□□□□ -0.53
TOP3A-201ENST00000321105 SNX25Q9H3E2 840 aa11.74□□□□□ -0.53
TOP3A-201ENST00000321105 ANKZF1Q9H8Y5 726 aa11.74□□□□□ -0.53
TOP3A-201ENST00000321105 GOLGA8KD6RF30 607 aa11.74□□□□□ -0.53
TOP3A-201ENST00000321105 F8VZ95 297 aa11.74□□□□□ -0.53
TOP3A-201ENST00000321105 SASH3O75995 380 aa11.74□□□□□ -0.53
TOP3A-201ENST00000321105 HUNKP57058 714 aa11.74□□□□□ -0.53
TOP3A-201ENST00000321105 TMEM132BQ14DG7 1078 aa11.74□□□□□ -0.53
TOP3A-201ENST00000321105 PCNX4Q63HM2 1172 aa11.74□□□□□ -0.53
TOP3A-201ENST00000321105 SIAH1Q8IUQ4 282 aa11.74□□□□□ -0.53
TOP3A-201ENST00000321105 FBF1Q8TES7 1133 aa11.74□□□□□ -0.53
TOP3A-201ENST00000321105 C9orf72Q96LT7 481 aa11.74□□□□□ -0.53
TOP3A-201ENST00000321105 SPATC1LQ9H0A9 340 aa11.74□□□□□ -0.53
TOP3A-201ENST00000321105 FAM114A2Q9NRY5 505 aa11.74□□□□□ -0.53
TOP3A-201ENST00000321105 FNDC3AQ9Y2H6 1198 aaKnown RBP11.74□□□□□ -0.53
TOP3A-201ENST00000321105 UBE4BO95155 1302 aa11.74□□□□□ -0.53
TOP3A-201ENST00000321105 ZNF286BP0CG31 522 aa11.73□□□□□ -0.53
TOP3A-201ENST00000321105 GTF2H1P32780 548 aa11.73□□□□□ -0.53
TOP3A-201ENST00000321105 PHKA2P46019 1235 aa11.73□□□□□ -0.53
TOP3A-201ENST00000321105 KCNT1Q5JUK3 1230 aa11.73□□□□□ -0.53
TOP3A-201ENST00000321105 FAM102AQ5T9C2 384 aaPredicted RBP11.73□□□□□ -0.53
TOP3A-201ENST00000321105 DARS2Q6PI48 645 aaKnown RBP11.73□□□□□ -0.53
TOP3A-201ENST00000321105 SLC5A5Q92911 643 aa11.73□□□□□ -0.53
TOP3A-201ENST00000321105 OPTNQ96CV9 577 aa11.73□□□□□ -0.53
TOP3A-201ENST00000321105 TLR10Q9BXR5 811 aa11.73□□□□□ -0.53
TOP3A-201ENST00000321105 FUT8Q9BYC5 575 aa11.73□□□□□ -0.53
TOP3A-201ENST00000321105 SCN11AQ9UI33 1791 aa11.73□□□□□ -0.53
TOP3A-201ENST00000321105 DDX3XO00571 662 aaKnown RBP eCLIP11.73□□□□□ -0.532e-11■■■□□ 16.2
TOP3A-201ENST00000321105 EIF3DO15371 548 aaKnown RBP eCLIP11.73□□□□□ -0.53
TOP3A-201ENST00000321105 CELF2O95319 508 aaKnown RBP11.73□□□□□ -0.53
TOP3A-201ENST00000321105 GLI1P08151 1106 aa11.73□□□□□ -0.53
TOP3A-201ENST00000321105 FDX1P10109 184 aa11.73□□□□□ -0.53
TOP3A-201ENST00000321105 PPATQ06203 517 aa11.73□□□□□ -0.53
TOP3A-201ENST00000321105 ZSWIM2Q8NEG5 633 aa11.73□□□□□ -0.53
TOP3A-201ENST00000321105 TPCN2Q8NHX9 752 aa11.73□□□□□ -0.53
TOP3A-201ENST00000321105 CYFIP2Q96F07 1278 aa11.73□□□□□ -0.53
TOP3A-201ENST00000321105 MCEEQ96PE7 176 aa11.73□□□□□ -0.53
TOP3A-201ENST00000321105 RANBP17Q9H2T7 1088 aaKnown RBP11.73□□□□□ -0.53
TOP3A-201ENST00000321105 PIN4Q9Y237 131 aaKnown RBP11.73□□□□□ -0.53
TOP3A-201ENST00000321105 MRPL42Q9Y6G3 142 aaKnown RBP11.73□□□□□ -0.53
TOP3A-201ENST00000321105 GRID2IPA4D2P6 1211 aa11.73□□□□□ -0.53
TOP3A-201ENST00000321105 RASGRF2O14827 1237 aa11.73□□□□□ -0.53
TOP3A-201ENST00000321105 H2AFXP16104 143 aaPredicted RBP11.73□□□□□ -0.53
TOP3A-201ENST00000321105 RRM1P23921 792 aa11.73□□□□□ -0.53
TOP3A-201ENST00000321105 DSG3P32926 999 aa11.73□□□□□ -0.53
TOP3A-201ENST00000321105 TAF1CQ15572 869 aaPredicted RBP11.73□□□□□ -0.53
TOP3A-201ENST00000321105 TCP11Q8WWU5 503 aa11.73□□□□□ -0.53
TOP3A-201ENST00000321105 ZNF446Q9NWS9 450 aa11.73□□□□□ -0.53
TOP3A-201ENST00000321105 STK38LQ9Y2H1 464 aa11.73□□□□□ -0.53
TOP3A-201ENST00000321105 ARFGEF2Q9Y6D5 1785 aa11.73□□□□□ -0.53
TOP3A-201ENST00000321105 SEMA3FQ13275 785 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms