RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 MTHFD1LQ6UB35 978 aa17.78■□□□□ 0.44
SMCHD1-201ENST00000320876 VAMP7P51809 220 aa17.78■□□□□ 0.44
SMCHD1-201ENST00000320876 TP53BP2Q13625 1128 aa17.78■□□□□ 0.44
SMCHD1-201ENST00000320876 CTTNQ14247 550 aaKnown RBP17.78■□□□□ 0.44
SMCHD1-201ENST00000320876 USP17L2Q6R6M4 530 aa17.78■□□□□ 0.44
SMCHD1-201ENST00000320876 NLRP10Q86W26 655 aa17.78■□□□□ 0.44
SMCHD1-201ENST00000320876 CCDC24Q8N4L8 307 aa17.78■□□□□ 0.44
SMCHD1-201ENST00000320876 DSTYKQ6XUX3 929 aa17.78■□□□□ 0.44
SMCHD1-201ENST00000320876 C19orf60Q96EN9 201 aa17.78■□□□□ 0.44
SMCHD1-201ENST00000320876 TRIM49BA6NDI0 452 aa17.78■□□□□ 0.44
SMCHD1-201ENST00000320876 NFIBO00712 420 aa17.78■□□□□ 0.44
SMCHD1-201ENST00000320876 PPEF1O14829 653 aaPredicted RBP17.78■□□□□ 0.44
SMCHD1-201ENST00000320876 TSPY1Q01534 308 aa17.78■□□□□ 0.44
SMCHD1-201ENST00000320876 SLC27A3Q5K4L6 730 aa17.78■□□□□ 0.44
SMCHD1-201ENST00000320876 FAM167AQ96KS9 214 aa17.78■□□□□ 0.44
SMCHD1-201ENST00000320876 OLFML3Q9NRN5 406 aa17.78■□□□□ 0.44
SMCHD1-201ENST00000320876 NCK2O43639 380 aa17.78■□□□□ 0.44
SMCHD1-201ENST00000320876 ATP1A1P05023 1023 aaKnown RBP17.78■□□□□ 0.44
SMCHD1-201ENST00000320876 KCNJ6P48051 423 aa17.78■□□□□ 0.44
SMCHD1-201ENST00000320876 PPP1R18Q6NYC8 613 aa17.78■□□□□ 0.44
SMCHD1-201ENST00000320876 RINLQ6ZS11 566 aa17.78■□□□□ 0.44
SMCHD1-201ENST00000320876 EFHBQ8N7U6 833 aa17.78■□□□□ 0.44
SMCHD1-201ENST00000320876 ZCCHC17Q9NP64 241 aaKnown RBP17.78■□□□□ 0.44
SMCHD1-201ENST00000320876 HUS1O60921 280 aa17.78■□□□□ 0.44
SMCHD1-201ENST00000320876 DLGAP3O95886 979 aa17.78■□□□□ 0.44
SMCHD1-201ENST00000320876 OR6P1Q8NGX9 317 aa17.78■□□□□ 0.44
SMCHD1-201ENST00000320876 ATL2Q8NHH9 583 aa17.78■□□□□ 0.44
SMCHD1-201ENST00000320876 BTN2A2Q8WVV5 523 aa17.78■□□□□ 0.44
SMCHD1-201ENST00000320876 TLR7Q9NYK1 1049 aaKnown RBP17.78■□□□□ 0.44
SMCHD1-201ENST00000320876 CDC42BPAQ5VT25 1732 aa17.78■□□□□ 0.44
SMCHD1-201ENST00000320876 BNIP3LO60238 219 aa17.77■□□□□ 0.44
SMCHD1-201ENST00000320876 ACADSP16219 412 aa17.77■□□□□ 0.44
SMCHD1-201ENST00000320876 SH3TC2Q8TF17 1288 aa17.77■□□□□ 0.44
SMCHD1-201ENST00000320876 PPP1R2P1Q96PQ5 205 aa17.77■□□□□ 0.44
SMCHD1-201ENST00000320876 TRIP4Q15650 581 aaPredicted RBP17.77■□□□□ 0.44
SMCHD1-201ENST00000320876 P3H1Q32P28 736 aa17.77■□□□□ 0.44
SMCHD1-201ENST00000320876 FLAD1Q8NFF5 587 aa17.77■□□□□ 0.44
SMCHD1-201ENST00000320876 CDY2AQ9Y6F7 541 aa17.77■□□□□ 0.44
SMCHD1-201ENST00000320876 CDY1Q9Y6F8 540 aa17.77■□□□□ 0.44
SMCHD1-201ENST00000320876 LMTK3Q96Q04 1460 aa17.77■□□□□ 0.44
SMCHD1-201ENST00000320876 PHKA2P46019 1235 aa17.77■□□□□ 0.44
SMCHD1-201ENST00000320876 GPC3P51654 580 aa17.77■□□□□ 0.44
SMCHD1-201ENST00000320876 ARPP19P56211 112 aa17.77■□□□□ 0.44
SMCHD1-201ENST00000320876 WASHC5Q12768 1159 aa17.77■□□□□ 0.44
SMCHD1-201ENST00000320876 DRAP1Q14919 205 aaPredicted RBP17.77■□□□□ 0.44
SMCHD1-201ENST00000320876 PI4KBQ9UBF8 816 aa17.77■□□□□ 0.44
SMCHD1-201ENST00000320876 MYO1GB0I1T2 1018 aa17.77■□□□□ 0.44
SMCHD1-201ENST00000320876 ITSN1Q15811 1721 aa17.77■□□□□ 0.44
SMCHD1-201ENST00000320876 GCLMP48507 274 aa17.77■□□□□ 0.44
SMCHD1-201ENST00000320876 SETD3Q86TU7 594 aaPredicted RBP17.77■□□□□ 0.44
SMCHD1-201ENST00000320876 DCAF4Q8WV16 495 aa17.77■□□□□ 0.44
SMCHD1-201ENST00000320876 THTPAQ9BU02 230 aa17.77■□□□□ 0.44
SMCHD1-201ENST00000320876 PHF2O75151 1096 aa17.77■□□□□ 0.43
SMCHD1-201ENST00000320876 LAMB3Q13751 1172 aa17.77■□□□□ 0.43
SMCHD1-201ENST00000320876 TRIM71Q2Q1W2 868 aaKnown RBP17.77■□□□□ 0.43
SMCHD1-201ENST00000320876 FAM160B2Q86V87 743 aa17.77■□□□□ 0.43
SMCHD1-201ENST00000320876 FAM162AQ96A26 154 aa17.77■□□□□ 0.43
SMCHD1-201ENST00000320876 ST13P50502 369 aaKnown RBP17.77■□□□□ 0.43
SMCHD1-201ENST00000320876 WLSQ5T9L3 541 aa17.77■□□□□ 0.43
SMCHD1-201ENST00000320876 LCORLQ8N3X6 602 aa17.77■□□□□ 0.43
SMCHD1-201ENST00000320876 DDHD1Q8NEL9 900 aa17.77■□□□□ 0.43
SMCHD1-201ENST00000320876 PIGOQ8TEQ8 1089 aa17.77■□□□□ 0.43
SMCHD1-201ENST00000320876 UNC45AQ9H3U1 944 aa17.77■□□□□ 0.43
SMCHD1-201ENST00000320876 ZNF211Q13398 564 aaPredicted RBP17.76■□□□□ 0.43
SMCHD1-201ENST00000320876 PRPF39Q86UA1 669 aaKnown RBP17.76■□□□□ 0.43
SMCHD1-201ENST00000320876 RIBC1Q8N443 379 aaPredicted RBP17.76■□□□□ 0.43
SMCHD1-201ENST00000320876 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.76■□□□□ 0.43
SMCHD1-201ENST00000320876 RALBP11234 206 aa17.76■□□□□ 0.43
SMCHD1-201ENST00000320876 VHLP40337 213 aa17.76■□□□□ 0.43
SMCHD1-201ENST00000320876 MTMR1Q13613 665 aa17.76■□□□□ 0.43
SMCHD1-201ENST00000320876 DPY19L2Q6NUT2 758 aa17.76■□□□□ 0.43
SMCHD1-201ENST00000320876 TTC23LQ6PF05 361 aa17.76■□□□□ 0.43
SMCHD1-201ENST00000320876 FBXO2Q9UK22 296 aaPredicted RBP17.76■□□□□ 0.43
SMCHD1-201ENST00000320876 MYL2P10916 166 aa17.76■□□□□ 0.43
SMCHD1-201ENST00000320876 TCF3P15923 654 aa17.76■□□□□ 0.43
SMCHD1-201ENST00000320876 HOXA13P31271 388 aaPredicted RBP17.76■□□□□ 0.43
SMCHD1-201ENST00000320876 PRELPP51888 382 aa17.76■□□□□ 0.43
SMCHD1-201ENST00000320876 RCAN1P53805 252 aa17.76■□□□□ 0.43
SMCHD1-201ENST00000320876 UBE2SQ16763 222 aa17.76■□□□□ 0.43
SMCHD1-201ENST00000320876 C20orf96Q9NUD7 363 aaPredicted RBP17.76■□□□□ 0.43
SMCHD1-201ENST00000320876 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.76■□□□□ 0.43
SMCHD1-201ENST00000320876 TLR2O60603 784 aa17.76■□□□□ 0.43
SMCHD1-201ENST00000320876 RNF25Q96BH1 459 aaPredicted RBP17.76■□□□□ 0.43
SMCHD1-201ENST00000320876 NDFIP2Q9NV92 336 aa17.76■□□□□ 0.43
SMCHD1-201ENST00000320876 M0QYV0 167 aa17.76■□□□□ 0.43
SMCHD1-201ENST00000320876 RTN2O75298 545 aa17.76■□□□□ 0.43
SMCHD1-201ENST00000320876 PSMA4P25789 261 aaKnown RBP17.76■□□□□ 0.43
SMCHD1-201ENST00000320876 TBL3Q12788 808 aaKnown RBP17.76■□□□□ 0.43
SMCHD1-201ENST00000320876 PGBD4Q96DM1 585 aa17.76■□□□□ 0.43
SMCHD1-201ENST00000320876 ATXN7L3BQ96GX2 97 aa17.76■□□□□ 0.43
SMCHD1-201ENST00000320876 PTCH1Q13635 1447 aa17.76■□□□□ 0.43
SMCHD1-201ENST00000320876 SPDYE5A6NIY4 337 aa17.76■□□□□ 0.43
SMCHD1-201ENST00000320876 SPDYE7PQ495Y7 208 aa17.76■□□□□ 0.43
SMCHD1-201ENST00000320876 MDH1BQ5I0G3 518 aa17.76■□□□□ 0.43
SMCHD1-201ENST00000320876 SPDYAQ5MJ70 313 aa17.76■□□□□ 0.43
SMCHD1-201ENST00000320876 ZNF507Q8TCN5 953 aa17.76■□□□□ 0.43
SMCHD1-201ENST00000320876 PLEKHA8Q96JA3 519 aa17.76■□□□□ 0.43
SMCHD1-201ENST00000320876 SNX12Q9UMY4 172 aa17.76■□□□□ 0.43
SMCHD1-201ENST00000320876 CDK12Q9NYV4 1490 aaPredicted RBP17.76■□□□□ 0.43
SMCHD1-201ENST00000320876 STRNO43815 780 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms