RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 CARD9Q9H257 536 aa15.16■□□□□ 0.02
PABPC1-201ENST00000318607 METTL14Q9HCE5 456 aaKnown RBP15.16■□□□□ 0.02
PABPC1-201ENST00000318607 APEX2Q9UBZ4 518 aa15.16■□□□□ 0.02
PABPC1-201ENST00000318607 SLC12A4Q9UP95 1085 aa15.16■□□□□ 0.02
PABPC1-201ENST00000318607 BCL9O00512 1426 aa15.16■□□□□ 0.02
PABPC1-201ENST00000318607 ARHGEF35A5YM69 484 aa15.16■□□□□ 0.02
PABPC1-201ENST00000318607 C5orf60A6NFR6 353 aa15.16■□□□□ 0.02
PABPC1-201ENST00000318607 ASAP2O43150 1006 aa15.16■□□□□ 0.02
PABPC1-201ENST00000318607 BCRP11274 1271 aa15.16■□□□□ 0.02
PABPC1-201ENST00000318607 CCND1P24385 295 aa15.16■□□□□ 0.02
PABPC1-201ENST00000318607 CTNNA2P26232 953 aa15.16■□□□□ 0.02
PABPC1-201ENST00000318607 GPSM2P81274 684 aa15.16■□□□□ 0.02
PABPC1-201ENST00000318607 CETN1Q12798 172 aa15.16■□□□□ 0.02
PABPC1-201ENST00000318607 MTDHQ86UE4 582 aaKnown RBP15.16■□□□□ 0.02
PABPC1-201ENST00000318607 CPXCR1Q8N123 301 aa15.16■□□□□ 0.02
PABPC1-201ENST00000318607 P2RX7Q99572 595 aaKnown RBP15.16■□□□□ 0.02
PABPC1-201ENST00000318607 TTC1Q99614 292 aa15.16■□□□□ 0.02
PABPC1-201ENST00000318607 ARMCX1Q9P291 453 aa15.16■□□□□ 0.02
PABPC1-201ENST00000318607 DISP2A7MBM2 1401 aa15.16■□□□□ 0.02
PABPC1-201ENST00000318607 BCL9LQ86UU0 1499 aa15.16■□□□□ 0.02
PABPC1-201ENST00000318607 A0A1B0GVG6 124 aa15.16■□□□□ 0.02
PABPC1-201ENST00000318607 GAS7O60861 476 aa15.16■□□□□ 0.02
PABPC1-201ENST00000318607 CHRNA3P32297 505 aa15.16■□□□□ 0.02
PABPC1-201ENST00000318607 AMIGO3Q86WK7 504 aa15.16■□□□□ 0.02
PABPC1-201ENST00000318607 SLC13A5Q86YT5 568 aaPredicted RBP15.16■□□□□ 0.02
PABPC1-201ENST00000318607 ZSWIM1Q9BR11 485 aa15.16■□□□□ 0.02
PABPC1-201ENST00000318607 RTFDC1Q9BY42 306 aaPredicted RBP15.16■□□□□ 0.02
PABPC1-201ENST00000318607 STK33Q9BYT3 514 aa15.16■□□□□ 0.02
PABPC1-201ENST00000318607 TMEM117Q9H0C3 514 aa15.16■□□□□ 0.02
PABPC1-201ENST00000318607 PARVGQ9HBI0 331 aa15.16■□□□□ 0.02
PABPC1-201ENST00000318607 SAE1Q9UBE0 346 aaPredicted RBP15.16■□□□□ 0.02
PABPC1-201ENST00000318607 ECM29Q5VYK3 1845 aa15.15■□□□□ 0.02
PABPC1-201ENST00000318607 TOGARAM1Q9Y4F4 1720 aa15.15■□□□□ 0.02
PABPC1-201ENST00000318607 CFAP73A6NFT4 308 aa15.15■□□□□ 0.02
PABPC1-201ENST00000318607 CCDC160A6NGH7 325 aa15.15■□□□□ 0.02
PABPC1-201ENST00000318607 TMEM253P0C7T8 217 aa15.15■□□□□ 0.02
PABPC1-201ENST00000318607 PLS3P13797 630 aa15.15■□□□□ 0.02
PABPC1-201ENST00000318607 ETS2P15036 469 aa15.15■□□□□ 0.02
PABPC1-201ENST00000318607 RASIP1Q5U651 963 aa15.15■□□□□ 0.02
PABPC1-201ENST00000318607 RINT1Q6NUQ1 792 aa15.15■□□□□ 0.02
PABPC1-201ENST00000318607 RFWD3Q6PCD5 774 aa15.15■□□□□ 0.02
PABPC1-201ENST00000318607 C16orf86Q6ZW13 317 aa15.15■□□□□ 0.02
PABPC1-201ENST00000318607 TEKT4Q8WW24 435 aa15.15■□□□□ 0.02
PABPC1-201ENST00000318607 PCDHB18PQ96TA0 734 aa15.15■□□□□ 0.02
PABPC1-201ENST00000318607 VCAM1P19320 739 aa15.15■□□□□ 0.02
PABPC1-201ENST00000318607 MGAT5Q09328 741 aa15.15■□□□□ 0.02
PABPC1-201ENST00000318607 SLMAPQ14BN4 828 aa15.15■□□□□ 0.02
PABPC1-201ENST00000318607 FASTKD3Q14CZ7 662 aaKnown RBP15.15■□□□□ 0.02
PABPC1-201ENST00000318607 TAF1BQ53T94 588 aaPredicted RBP15.15■□□□□ 0.02
PABPC1-201ENST00000318607 ZFATQ9P243 1243 aa15.15■□□□□ 0.02
PABPC1-201ENST00000318607 PCDHA2Q9Y5H9 948 aa15.15■□□□□ 0.02
PABPC1-201ENST00000318607 CCDC195A0A1B0GUA6 201 aa15.15■□□□□ 0.02
PABPC1-201ENST00000318607 MSH4O15457 936 aa15.15■□□□□ 0.02
PABPC1-201ENST00000318607 RRP1BQ14684 758 aaKnown RBP15.15■□□□□ 0.02
PABPC1-201ENST00000318607 VSTM1Q6UX27 236 aa15.15■□□□□ 0.02
PABPC1-201ENST00000318607 PGM2Q96G03 612 aa15.15■□□□□ 0.02
PABPC1-201ENST00000318607 CCDC77Q9BR77 488 aa15.15■□□□□ 0.02
PABPC1-201ENST00000318607 RIOX1Q9H6W3 641 aa15.15■□□□□ 0.02
PABPC1-201ENST00000318607 PHTF1Q9UMS5 762 aa15.15■□□□□ 0.02
PABPC1-201ENST00000318607 AFF2P51816 1311 aa15.14■□□□□ 0.01
PABPC1-201ENST00000318607 MYH1P12882 1939 aa15.14■□□□□ 0.01
PABPC1-201ENST00000318607 MYH4Q9Y623 1939 aa15.14■□□□□ 0.01
PABPC1-201ENST00000318607 PDXKO00764 312 aa15.14■□□□□ 0.01
PABPC1-201ENST00000318607 TXNDC9O14530 226 aa15.14■□□□□ 0.01
PABPC1-201ENST00000318607 SPATA31C1P0DKV0 1188 aa15.14■□□□□ 0.01
PABPC1-201ENST00000318607 RALAP11233 206 aa15.14■□□□□ 0.01
PABPC1-201ENST00000318607 RWDD2BP57060 319 aa15.14■□□□□ 0.01
PABPC1-201ENST00000318607 IL9RQ01113 521 aa15.14■□□□□ 0.01
PABPC1-201ENST00000318607 PPP3CAQ08209 521 aa15.14■□□□□ 0.01
PABPC1-201ENST00000318607 ITIH4Q14624 930 aa15.14■□□□□ 0.01
PABPC1-201ENST00000318607 PKN2Q16513 984 aaKnown RBP15.14■□□□□ 0.01
PABPC1-201ENST00000318607 EDRF1Q3B7T1 1238 aa15.14■□□□□ 0.01
PABPC1-201ENST00000318607 ASPRV1Q53RT3 343 aa15.14■□□□□ 0.01
PABPC1-201ENST00000318607 ZBED8Q8IZ13 594 aa15.14■□□□□ 0.01
PABPC1-201ENST00000318607 CNBD1Q8NA66 436 aa15.14■□□□□ 0.01
PABPC1-201ENST00000318607 RBM15Q96T37 977 aaKnown RBP eCLIP15.14■□□□□ 0.01
PABPC1-201ENST00000318607 C11orf70Q9BRQ4 267 aa15.14■□□□□ 0.01
PABPC1-201ENST00000318607 STXBP5LQ9Y2K9 1186 aa15.14■□□□□ 0.01
PABPC1-201ENST00000318607 F5H423 210 aaPredicted RBP15.14■□□□□ 0.01
PABPC1-201ENST00000318607 SLC16A4O15374 487 aa15.14■□□□□ 0.01
PABPC1-201ENST00000318607 GHRP10912 638 aa15.14■□□□□ 0.01
PABPC1-201ENST00000318607 ATP4AP20648 1035 aa15.14■□□□□ 0.01
PABPC1-201ENST00000318607 ALDH3A1P30838 453 aa15.14■□□□□ 0.01
PABPC1-201ENST00000318607 SF3B3Q15393 1217 aaKnown RBP15.14■□□□□ 0.01
PABPC1-201ENST00000318607 P3H1Q32P28 736 aa15.14■□□□□ 0.01
PABPC1-201ENST00000318607 IZUMO3Q5VZ72 239 aa15.14■□□□□ 0.01
PABPC1-201ENST00000318607 TTC17Q96AE7 1141 aa15.14■□□□□ 0.01
PABPC1-201ENST00000318607 TBC1D10AQ9BXI6 508 aa15.14■□□□□ 0.01
PABPC1-201ENST00000318607 LAMB2P55268 1798 aa15.14■□□□□ 0.01
PABPC1-201ENST00000318607 SYNGAP1Q96PV0 1343 aa15.14■□□□□ 0.01
PABPC1-201ENST00000318607 RTN2O75298 545 aa15.13■□□□□ 0.01
PABPC1-201ENST00000318607 MAP3K6O95382 1288 aa15.13■□□□□ 0.01
PABPC1-201ENST00000318607 GAS8O95995 478 aa15.13■□□□□ 0.01
PABPC1-201ENST00000318607 RARGP13631 454 aa15.13■□□□□ 0.01
PABPC1-201ENST00000318607 RANBP1P43487 201 aa15.13■□□□□ 0.01
PABPC1-201ENST00000318607 RCN1Q15293 331 aa15.13■□□□□ 0.01
PABPC1-201ENST00000318607 MIS18BP1Q6P0N0 1132 aa15.13■□□□□ 0.01
PABPC1-201ENST00000318607 SLC30A9Q6PML9 568 aa15.13■□□□□ 0.01
PABPC1-201ENST00000318607 ARHGEF18Q6ZSZ5 1173 aa15.13■□□□□ 0.01
PABPC1-201ENST00000318607 NOP9Q86U38 636 aaKnown RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms