RNA–Protein interactions for RNA: ENST00000318220.10

NBPF3-201, Transcript of NBPF member 3, humanhuman

TSL 2

Gene NBPF3, Length 4,401 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3-201ENST00000318220 SMYD2Q9NRG4 433 aa14.14□□□□□ -0.15
NBPF3-201ENST00000318220 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.14□□□□□ -0.15
NBPF3-201ENST00000318220 TACC3Q9Y6A5 838 aa14.14□□□□□ -0.15
NBPF3-201ENST00000318220 SNCAIPQ9Y6H5 919 aa14.14□□□□□ -0.15
NBPF3-201ENST00000318220 NWD1Q149M9 1564 aa14.14□□□□□ -0.15
NBPF3-201ENST00000318220 MYO5BQ9ULV0 1848 aa14.13□□□□□ -0.15
NBPF3-201ENST00000318220 MYMKA6NI61 221 aa14.13□□□□□ -0.15
NBPF3-201ENST00000318220 PFDN6O15212 129 aa14.13□□□□□ -0.15
NBPF3-201ENST00000318220 MAP3K13O43283 966 aa14.13□□□□□ -0.15
NBPF3-201ENST00000318220 PRR29P0C7W0 189 aa14.13□□□□□ -0.15
NBPF3-201ENST00000318220 KCNA10Q16322 511 aa14.13□□□□□ -0.15
NBPF3-201ENST00000318220 ALKBH5Q6P6C2 394 aaKnown RBP14.13□□□□□ -0.15
NBPF3-201ENST00000318220 C11orf57Q6ZUT1 292 aaPredicted RBP14.13□□□□□ -0.15
NBPF3-201ENST00000318220 PALM2Q8IXS6 379 aa14.13□□□□□ -0.15
NBPF3-201ENST00000318220 EFCAB13Q8IY85 973 aa14.13□□□□□ -0.15
NBPF3-201ENST00000318220 ARNTL2Q8WYA1 636 aa14.13□□□□□ -0.15
NBPF3-201ENST00000318220 RIOX1Q9H6W3 641 aa14.13□□□□□ -0.15
NBPF3-201ENST00000318220 FEZ2Q9UHY8 353 aaPredicted RBP14.13□□□□□ -0.15
NBPF3-201ENST00000318220 PTPN22Q9Y2R2 807 aa14.13□□□□□ -0.15
NBPF3-201ENST00000318220 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.13□□□□□ -0.15
NBPF3-201ENST00000318220 ASMTLO95671 621 aa14.13□□□□□ -0.15
NBPF3-201ENST00000318220 NFKBIAP25963 317 aa14.13□□□□□ -0.15
NBPF3-201ENST00000318220 ORC2Q13416 577 aaPredicted RBP14.13□□□□□ -0.15
NBPF3-201ENST00000318220 SEC23AQ15436 765 aa14.13□□□□□ -0.15
NBPF3-201ENST00000318220 KYAT1Q16773 422 aa14.13□□□□□ -0.15
NBPF3-201ENST00000318220 KDELC2Q7Z4H8 507 aa14.13□□□□□ -0.15
NBPF3-201ENST00000318220 STKLD1Q8NE28 680 aa14.13□□□□□ -0.15
NBPF3-201ENST00000318220 DHX35Q9H5Z1 703 aaKnown RBP14.13□□□□□ -0.15
NBPF3-201ENST00000318220 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.13□□□□□ -0.15
NBPF3-201ENST00000318220 IPO11Q9UI26 975 aaKnown RBP14.13□□□□□ -0.15
NBPF3-201ENST00000318220 UTP11Q9Y3A2 253 aaKnown RBP14.13□□□□□ -0.15
NBPF3-201ENST00000318220 HES2Q9Y543 173 aa14.13□□□□□ -0.15
NBPF3-201ENST00000318220 CDY2AQ9Y6F7 541 aa14.13□□□□□ -0.15
NBPF3-201ENST00000318220 DEPDC5O75140 1603 aa14.13□□□□□ -0.15
NBPF3-201ENST00000318220 SCAMP3O14828 347 aaKnown RBP14.13□□□□□ -0.15
NBPF3-201ENST00000318220 GNL1P36915 607 aaPredicted RBP14.13□□□□□ -0.15
NBPF3-201ENST00000318220 HIRAP54198 1017 aaPredicted RBP14.13□□□□□ -0.15
NBPF3-201ENST00000318220 TLE2Q04725 743 aa14.13□□□□□ -0.15
NBPF3-201ENST00000318220 ANO4Q32M45 955 aa14.13□□□□□ -0.15
NBPF3-201ENST00000318220 C17orf53Q8N3J3 647 aaPredicted RBP14.13□□□□□ -0.15
NBPF3-201ENST00000318220 ZNF296Q8WUU4 475 aaPredicted RBP14.13□□□□□ -0.15
NBPF3-201ENST00000318220 TIGD1Q96MW7 591 aa14.13□□□□□ -0.15
NBPF3-201ENST00000318220 CNOT8Q9UFF9 292 aaKnown RBP14.13□□□□□ -0.15
NBPF3-201ENST00000318220 CD52P31358 61 aa14.12□□□□□ -0.15
NBPF3-201ENST00000318220 CDK17Q00537 523 aa14.12□□□□□ -0.15
NBPF3-201ENST00000318220 CCL14Q16627 93 aa14.12□□□□□ -0.15
NBPF3-201ENST00000318220 LBX2Q6XYB7 198 aa14.12□□□□□ -0.15
NBPF3-201ENST00000318220 NDUFAF2Q8N183 169 aa14.12□□□□□ -0.15
NBPF3-201ENST00000318220 CIPCQ9C0C6 399 aa14.12□□□□□ -0.15
NBPF3-201ENST00000318220 SPTLC3Q9NUV7 552 aa14.12□□□□□ -0.15
NBPF3-201ENST00000318220 ANAPC7Q9UJX3 599 aa14.12□□□□□ -0.15
NBPF3-201ENST00000318220 GOLGA6L7A0A1B0GV03 622 aa14.12□□□□□ -0.15
NBPF3-201ENST00000318220 FSTL1Q12841 308 aa14.12□□□□□ -0.15
NBPF3-201ENST00000318220 SV2CQ496J9 727 aa14.12□□□□□ -0.15
NBPF3-201ENST00000318220 NAALADL2Q58DX5 795 aa14.12□□□□□ -0.15
NBPF3-201ENST00000318220 ZNF697Q5TEC3 545 aa14.12□□□□□ -0.15
NBPF3-201ENST00000318220 RESP18Q5W5W9 173 aa14.12□□□□□ -0.15
NBPF3-201ENST00000318220 SRRDQ9UH36 339 aa14.12□□□□□ -0.15
NBPF3-201ENST00000318220 KRIT1O00522 736 aa14.12□□□□□ -0.15
NBPF3-201ENST00000318220 ATP2C2O75185 946 aa14.12□□□□□ -0.15
NBPF3-201ENST00000318220 MED24O75448 989 aa14.12□□□□□ -0.15
NBPF3-201ENST00000318220 FGBP02675 491 aa14.12□□□□□ -0.15
NBPF3-201ENST00000318220 KRT15P19012 456 aa14.12□□□□□ -0.15
NBPF3-201ENST00000318220 BASP1P80723 227 aaKnown RBP14.12□□□□□ -0.15
NBPF3-201ENST00000318220 LAMTOR4Q0VGL1 99 aa14.12□□□□□ -0.15
NBPF3-201ENST00000318220 DARS2Q6PI48 645 aaKnown RBP14.12□□□□□ -0.15
NBPF3-201ENST00000318220 MTERF4Q7Z6M4 381 aaKnown RBP14.12□□□□□ -0.15
NBPF3-201ENST00000318220 MAP3K14Q99558 947 aa14.12□□□□□ -0.15
NBPF3-201ENST00000318220 AGO4Q9HCK5 861 aaKnown RBP14.12□□□□□ -0.15
NBPF3-201ENST00000318220 RWDD2AQ9UIY3 292 aa14.12□□□□□ -0.15
NBPF3-201ENST00000318220 TBC1D12O60347 775 aa14.12□□□□□ -0.15
NBPF3-201ENST00000318220 TBXAS1P24557 533 aaPredicted RBP14.12□□□□□ -0.15
NBPF3-201ENST00000318220 MXRA7P84157 204 aa14.12□□□□□ -0.15
NBPF3-201ENST00000318220 VSIG10LQ86VR7 867 aa14.12□□□□□ -0.15
NBPF3-201ENST00000318220 SNX19Q92543 992 aa14.12□□□□□ -0.15
NBPF3-201ENST00000318220 CHMP6Q96FZ7 201 aa14.12□□□□□ -0.15
NBPF3-201ENST00000318220 GDAP1L1Q96MZ0 367 aa14.12□□□□□ -0.15
NBPF3-201ENST00000318220 DPH5Q9H2P9 285 aa14.12□□□□□ -0.15
NBPF3-201ENST00000318220 PTCH2Q9Y6C5 1203 aa14.12□□□□□ -0.15
NBPF3-201ENST00000318220 STK4Q13043 487 aa14.11□□□□□ -0.15
NBPF3-201ENST00000318220 RDM1Q8NG50 284 aa14.11□□□□□ -0.15
NBPF3-201ENST00000318220 PPP4R1Q8TF05 950 aa14.11□□□□□ -0.15
NBPF3-201ENST00000318220 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.11□□□□□ -0.15
NBPF3-201ENST00000318220 RNPEPQ9H4A4 650 aa14.11□□□□□ -0.15
NBPF3-201ENST00000318220 RSAD1Q9HA92 442 aa14.11□□□□□ -0.15
NBPF3-201ENST00000318220 BZW2Q9Y6E2 419 aaKnown RBP14.11□□□□□ -0.15
NBPF3-201ENST00000318220 BUB1BO60566 1050 aaPredicted RBP14.11□□□□□ -0.15
NBPF3-201ENST00000318220 ATXN3P54252 364 aaPredicted RBP14.11□□□□□ -0.15
NBPF3-201ENST00000318220 ZNF280AP59817 542 aaPredicted RBP14.11□□□□□ -0.15
NBPF3-201ENST00000318220 DRAP1Q14919 205 aaPredicted RBP14.11□□□□□ -0.15
NBPF3-201ENST00000318220 SMAD1Q15797 465 aaKnown RBP14.11□□□□□ -0.15
NBPF3-201ENST00000318220 SHC4Q6S5L8 630 aa14.11□□□□□ -0.15
NBPF3-201ENST00000318220 GUF1Q8N442 669 aaKnown RBP14.11□□□□□ -0.15
NBPF3-201ENST00000318220 TRIM11Q96F44 468 aa14.11□□□□□ -0.15
NBPF3-201ENST00000318220 CCSER1Q9C0I3 900 aa14.11□□□□□ -0.15
NBPF3-201ENST00000318220 DONSONQ9NYP3 566 aa14.11□□□□□ -0.15
NBPF3-201ENST00000318220 SPTA1P02549 2419 aa14.11□□□□□ -0.15
NBPF3-201ENST00000318220 FAM86B1E9PN63 330 aa14.11□□□□□ -0.15
NBPF3-201ENST00000318220 CYB561D2O14569 222 aa14.11□□□□□ -0.15
NBPF3-201ENST00000318220 OGTO15294 1046 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms