RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 ZNF792Q3KQV3 632 aa14.09□□□□□ -0.15
CPNE1-201ENST00000317677 CELF3Q5SZQ8 465 aaKnown RBP14.09□□□□□ -0.15
CPNE1-201ENST00000317677 ANKRD23Q86SG2 305 aa14.09□□□□□ -0.15
CPNE1-201ENST00000317677 TRIM50Q86XT4 487 aa14.09□□□□□ -0.15
CPNE1-201ENST00000317677 SLC35F6Q8N357 371 aa14.09□□□□□ -0.15
CPNE1-201ENST00000317677 GPRC5AQ8NFJ5 357 aa14.09□□□□□ -0.15
CPNE1-201ENST00000317677 TCP11Q8WWU5 503 aa14.09□□□□□ -0.15
CPNE1-201ENST00000317677 SYN2Q92777 582 aaPredicted RBP14.09□□□□□ -0.15
CPNE1-201ENST00000317677 TMEM143Q96AN5 459 aa14.09□□□□□ -0.15
CPNE1-201ENST00000317677 GPR20Q99678 358 aa14.09□□□□□ -0.15
CPNE1-201ENST00000317677 SLC24A3Q9HC58 644 aa14.09□□□□□ -0.15
CPNE1-201ENST00000317677 GCNT4Q9P109 453 aa14.09□□□□□ -0.15
CPNE1-201ENST00000317677 MORF4L1Q9UBU8 362 aa14.09□□□□□ -0.15
CPNE1-201ENST00000317677 FRMD4BQ9Y2L6 1034 aa14.09□□□□□ -0.15
CPNE1-201ENST00000317677 GTPBP10A4D1E9 387 aaKnown RBP14.09□□□□□ -0.15
CPNE1-201ENST00000317677 CDR1P51861 262 aa14.09□□□□□ -0.15
CPNE1-201ENST00000317677 ZNF662Q6ZS27 426 aa14.09□□□□□ -0.15
CPNE1-201ENST00000317677 SEPT1Q8WYJ6 367 aa14.09□□□□□ -0.15
CPNE1-201ENST00000317677 HVCN1Q96D96 273 aa14.09□□□□□ -0.15
CPNE1-201ENST00000317677 C17orf75Q9HAS0 396 aa14.09□□□□□ -0.15
CPNE1-201ENST00000317677 ARHGAP28Q9P2N2 729 aa14.09□□□□□ -0.15
CPNE1-201ENST00000317677 GOLGA8IPA6NC78 632 aa14.08□□□□□ -0.16
CPNE1-201ENST00000317677 GOLGA8JA6NMD2 632 aa14.08□□□□□ -0.16
CPNE1-201ENST00000317677 LRRN2O75325 713 aa14.08□□□□□ -0.16
CPNE1-201ENST00000317677 LGR5O75473 907 aa14.08□□□□□ -0.16
CPNE1-201ENST00000317677 EDN1P05305 212 aa14.08□□□□□ -0.16
CPNE1-201ENST00000317677 GLRA2P23416 452 aa14.08□□□□□ -0.16
CPNE1-201ENST00000317677 ARL2P36404 184 aa14.08□□□□□ -0.16
CPNE1-201ENST00000317677 STAT5BP51692 787 aa14.08□□□□□ -0.16
CPNE1-201ENST00000317677 NAP1L1P55209 391 aaKnown RBP14.08□□□□□ -0.16
CPNE1-201ENST00000317677 JAM2P57087 298 aa14.08□□□□□ -0.16
CPNE1-201ENST00000317677 MCCD1P59942 119 aaPredicted RBP14.08□□□□□ -0.16
CPNE1-201ENST00000317677 IFFO1Q0D2I5 559 aa14.08□□□□□ -0.16
CPNE1-201ENST00000317677 SFMBT2Q5VUG0 894 aa14.08□□□□□ -0.16
CPNE1-201ENST00000317677 IQCEQ6IPM2 695 aa14.08□□□□□ -0.16
CPNE1-201ENST00000317677 MAMDC4Q6UXC1 1216 aa14.08□□□□□ -0.16
CPNE1-201ENST00000317677 ARMCX2Q7L311 632 aa14.08□□□□□ -0.16
CPNE1-201ENST00000317677 XXYLT1Q8NBI6 393 aa14.08□□□□□ -0.16
CPNE1-201ENST00000317677 LMO3Q8TAP4 145 aa14.08□□□□□ -0.16
CPNE1-201ENST00000317677 GTF3C2Q8WUA4 911 aaPredicted RBP14.08□□□□□ -0.16
CPNE1-201ENST00000317677 RIN2Q8WYP3 895 aaPredicted RBP14.08□□□□□ -0.16
CPNE1-201ENST00000317677 CCDC42Q96M95 316 aa14.08□□□□□ -0.16
CPNE1-201ENST00000317677 SLC40A1Q9NP59 571 aa14.08□□□□□ -0.16
CPNE1-201ENST00000317677 AIPL1Q9NZN9 384 aa14.08□□□□□ -0.16
CPNE1-201ENST00000317677 USP20Q9Y2K6 914 aa14.08□□□□□ -0.16
CPNE1-201ENST00000317677 DUSP10Q9Y6W6 482 aa14.08□□□□□ -0.16
CPNE1-201ENST00000317677 ADORA2AP29274 412 aa14.07□□□□□ -0.16
CPNE1-201ENST00000317677 CNGA1P29973 690 aa14.07□□□□□ -0.16
CPNE1-201ENST00000317677 POLGP54098 1239 aaPredicted RBP14.07□□□□□ -0.16
CPNE1-201ENST00000317677 PPP3CAQ08209 521 aa14.07□□□□□ -0.16
CPNE1-201ENST00000317677 RAPGEF1Q13905 1077 aa14.07□□□□□ -0.16
CPNE1-201ENST00000317677 ALS2CLQ60I27 953 aa14.07□□□□□ -0.16
CPNE1-201ENST00000317677 IRF2BP2Q7Z5L9 587 aa14.07□□□□□ -0.16
CPNE1-201ENST00000317677 KIAA1328Q86T90 577 aa14.07□□□□□ -0.16
CPNE1-201ENST00000317677 CBWD2Q8IUF1 395 aa14.07□□□□□ -0.16
CPNE1-201ENST00000317677 PARP9Q8IXQ6 854 aa14.07□□□□□ -0.16
CPNE1-201ENST00000317677 SLC17A8Q8NDX2 589 aa14.07□□□□□ -0.16
CPNE1-201ENST00000317677 MLXIPQ9HAP2 919 aa14.07□□□□□ -0.16
CPNE1-201ENST00000317677 SSU72P8A0A1W2PR75 194 aa14.07□□□□□ -0.16
CPNE1-201ENST00000317677 ZBTB42B2RXF5 422 aa14.07□□□□□ -0.16
CPNE1-201ENST00000317677 IPO7O95373 1038 aaKnown RBP14.07□□□□□ -0.16
CPNE1-201ENST00000317677 MYBL2P10244 700 aa14.07□□□□□ -0.16
CPNE1-201ENST00000317677 VAV2P52735 878 aa14.07□□□□□ -0.16
CPNE1-201ENST00000317677 SNRPFP62306 86 aaKnown RBP14.07□□□□□ -0.16
CPNE1-201ENST00000317677 KRT83P78385 493 aa14.07□□□□□ -0.16
CPNE1-201ENST00000317677 GFPT1Q06210 699 aaPredicted RBP14.07□□□□□ -0.16
CPNE1-201ENST00000317677 ZC3H12AQ5D1E8 599 aaKnown RBP14.07□□□□□ -0.16
CPNE1-201ENST00000317677 GJC2Q5T442 439 aaPredicted RBP14.07□□□□□ -0.16
CPNE1-201ENST00000317677 CDCA2Q69YH5 1023 aaPredicted RBP14.07□□□□□ -0.16
CPNE1-201ENST00000317677 TAPT1Q6NXT6 567 aa14.07□□□□□ -0.16
CPNE1-201ENST00000317677 C6orf89Q6UWU4 347 aa14.07□□□□□ -0.16
CPNE1-201ENST00000317677 TRAPPC11Q7Z392 1133 aa14.07□□□□□ -0.16
CPNE1-201ENST00000317677 CCDC13Q8IYE1 715 aa14.07□□□□□ -0.16
CPNE1-201ENST00000317677 OLIG1Q8TAK6 271 aa14.07□□□□□ -0.16
CPNE1-201ENST00000317677 JAKMIP2Q96AA8 810 aa14.07□□□□□ -0.16
CPNE1-201ENST00000317677 SAAL1Q96ER3 474 aa14.07□□□□□ -0.16
CPNE1-201ENST00000317677 PLCD4Q9BRC7 762 aa14.07□□□□□ -0.16
CPNE1-201ENST00000317677 SELENOOQ9BVL4 669 aa14.07□□□□□ -0.16
CPNE1-201ENST00000317677 KATNBL1Q9H079 304 aa14.07□□□□□ -0.16
CPNE1-201ENST00000317677 EPN3Q9H201 632 aa14.07□□□□□ -0.16
CPNE1-201ENST00000317677 HAUS4Q9H6D7 363 aa14.07□□□□□ -0.16
CPNE1-201ENST00000317677 FBXL5Q9UKA1 691 aa14.07□□□□□ -0.16
CPNE1-201ENST00000317677 GUCA1BQ9UMX6 200 aa14.07□□□□□ -0.16
CPNE1-201ENST00000317677 GOLGA6L7A0A1B0GV03 622 aa14.06□□□□□ -0.16
CPNE1-201ENST00000317677 CLSTN1O94985 981 aa14.06□□□□□ -0.16
CPNE1-201ENST00000317677 SERPING1P05155 500 aa14.06□□□□□ -0.16
CPNE1-201ENST00000317677 VAMP7P51809 220 aa14.06□□□□□ -0.16
CPNE1-201ENST00000317677 MKRN4PQ13434 485 aaPredicted RBP14.06□□□□□ -0.16
CPNE1-201ENST00000317677 RBBP5Q15291 538 aaKnown RBP14.06□□□□□ -0.16
CPNE1-201ENST00000317677 FAM160B1Q5W0V3 765 aa14.06□□□□□ -0.16
CPNE1-201ENST00000317677 AENQ8WTP8 325 aaKnown RBP14.06□□□□□ -0.16
CPNE1-201ENST00000317677 KCNN1Q92952 543 aa14.06□□□□□ -0.16
CPNE1-201ENST00000317677 ABHD8Q96I13 439 aa14.06□□□□□ -0.16
CPNE1-201ENST00000317677 GPR88Q9GZN0 384 aa14.06□□□□□ -0.16
CPNE1-201ENST00000317677 INTS2Q9H0H0 1204 aaKnown RBP14.06□□□□□ -0.16
CPNE1-201ENST00000317677 NUCKS1Q9H1E3 243 aaKnown RBP14.06□□□□□ -0.16
CPNE1-201ENST00000317677 PCDHA13Q9Y5I0 950 aa14.06□□□□□ -0.16
CPNE1-201ENST00000317677 EMSYQ7Z589 1322 aa14.06□□□□□ -0.16
CPNE1-201ENST00000317677 RBAK-RBAKDNI3L0D1 243 aa14.05□□□□□ -0.16
CPNE1-201ENST00000317677 MAPK13O15264 365 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms