RNA–Protein interactions for RNA: ENST00000317571.7

TTC39C-202, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39C, Length 2,442 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-202ENST00000317571 FAM213AQ9BRX8 229 aa22.19■■□□□ 1.14
TTC39C-202ENST00000317571 HAPLN2Q9GZV7 340 aa22.19■■□□□ 1.14
TTC39C-202ENST00000317571 GZMAP12544 262 aa22.18■■□□□ 1.14
TTC39C-202ENST00000317571 PEX5P50542 639 aa22.18■■□□□ 1.14
TTC39C-202ENST00000317571 CNTN2Q02246 1040 aa22.18■■□□□ 1.14
TTC39C-202ENST00000317571 MESDQ14696 234 aa22.18■■□□□ 1.14
TTC39C-202ENST00000317571 CYFIP1Q7L576 1253 aa22.18■■□□□ 1.14
TTC39C-202ENST00000317571 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP22.18■■□□□ 1.14
TTC39C-202ENST00000317571 CD101Q93033 1021 aa22.18■■□□□ 1.14
TTC39C-202ENST00000317571 NT5C1BQ96P26 610 aa22.18■■□□□ 1.14
TTC39C-202ENST00000317571 ZSWIM1Q9BR11 485 aa22.18■■□□□ 1.14
TTC39C-202ENST00000317571 ATP6V0A4Q9HBG4 840 aa22.18■■□□□ 1.14
TTC39C-202ENST00000317571 TRPC6Q9Y210 931 aa22.18■■□□□ 1.14
TTC39C-202ENST00000317571 AFG3L2Q9Y4W6 797 aa22.18■■□□□ 1.14
TTC39C-202ENST00000317571 POLR2AP24928 1970 aaKnown RBP22.18■■□□□ 1.14
TTC39C-202ENST00000317571 C19orf81C9J6K1 198 aa22.18■■□□□ 1.14
TTC39C-202ENST00000317571 MTA2O94776 668 aa22.18■■□□□ 1.14
TTC39C-202ENST00000317571 C10orf67Q8IYJ2 551 aa22.18■■□□□ 1.14
TTC39C-202ENST00000317571 MCPH1Q8NEM0 835 aa22.18■■□□□ 1.14
TTC39C-202ENST00000317571 GLG1Q92896 1179 aa22.18■■□□□ 1.14
TTC39C-202ENST00000317571 DIS3Q9Y2L1 958 aaKnown RBP22.18■■□□□ 1.14
TTC39C-202ENST00000317571 SUPT20HL2P0C7V6 817 aa22.17■■□□□ 1.14
TTC39C-202ENST00000317571 RTP1P59025 263 aa22.17■■□□□ 1.14
TTC39C-202ENST00000317571 CDR2Q01850 454 aa22.17■■□□□ 1.14
TTC39C-202ENST00000317571 SUPT20HL1Q3ZLR7 823 aa22.17■■□□□ 1.14
TTC39C-202ENST00000317571 C15orf39Q6ZRI6 1047 aa22.17■■□□□ 1.14
TTC39C-202ENST00000317571 CAPS2Q9BXY5 557 aa22.17■■□□□ 1.14
TTC39C-202ENST00000317571 TRIM31Q9BZY9 425 aa22.17■■□□□ 1.14
TTC39C-202ENST00000317571 TSPYL1Q9H0U9 437 aa22.17■■□□□ 1.14
TTC39C-202ENST00000317571 LRRC4CQ9HCJ2 640 aa22.17■■□□□ 1.14
TTC39C-202ENST00000317571 PTPRJQ12913 1337 aa22.17■■□□□ 1.14
TTC39C-202ENST00000317571 EDN1P05305 212 aa22.17■■□□□ 1.14
TTC39C-202ENST00000317571 SKOR1P84550 965 aa22.17■■□□□ 1.14
TTC39C-202ENST00000317571 BRDTQ58F21 947 aaPredicted RBP22.17■■□□□ 1.14
TTC39C-202ENST00000317571 MAATS1Q7Z4T9 603 aa22.17■■□□□ 1.14
TTC39C-202ENST00000317571 APOBEC3FQ8IUX4 373 aaKnown RBP22.17■■□□□ 1.14
TTC39C-202ENST00000317571 CCDC26Q8TAB7 109 aa22.17■■□□□ 1.14
TTC39C-202ENST00000317571 TMEM143Q96AN5 459 aa22.17■■□□□ 1.14
TTC39C-202ENST00000317571 MTFR1LQ9H019 292 aa22.17■■□□□ 1.14
TTC39C-202ENST00000317571 CYP1A2P05177 515 aa22.16■■□□□ 1.14
TTC39C-202ENST00000317571 EMC2Q15006 297 aa22.16■■□□□ 1.14
TTC39C-202ENST00000317571 ASAP3Q8TDY4 903 aa22.16■■□□□ 1.14
TTC39C-202ENST00000317571 NUP85Q9BW27 656 aa22.16■■□□□ 1.14
TTC39C-202ENST00000317571 RABEP2Q9H5N1 569 aa22.16■■□□□ 1.14
TTC39C-202ENST00000317571 RSPH14Q9UHP6 348 aa22.16■■□□□ 1.14
TTC39C-202ENST00000317571 SYNGAP1Q96PV0 1343 aa22.16■■□□□ 1.14
TTC39C-202ENST00000317571 PTPRFP10586 1907 aa22.16■■□□□ 1.14
TTC39C-202ENST00000317571 SIP14410 1827 aa22.16■■□□□ 1.14
TTC39C-202ENST00000317571 TCRBV7S2A1N4TA0A589 114 aa22.16■■□□□ 1.14
TTC39C-202ENST00000317571 GARTP22102 1010 aa22.16■■□□□ 1.14
TTC39C-202ENST00000317571 ATP1A2P50993 1020 aa22.16■■□□□ 1.14
TTC39C-202ENST00000317571 PRELID2Q8N945 189 aa22.16■■□□□ 1.14
TTC39C-202ENST00000317571 NLRP11P59045 1033 aaKnown RBP22.15■■□□□ 1.14
TTC39C-202ENST00000317571 GNGT1P63211 74 aa22.15■■□□□ 1.14
TTC39C-202ENST00000317571 CEP85LQ5SZL2 805 aa22.15■■□□□ 1.14
TTC39C-202ENST00000317571 TREML2Q5T2D2 321 aa22.15■■□□□ 1.14
TTC39C-202ENST00000317571 TMC3Q7Z5M5 1100 aa22.15■■□□□ 1.14
TTC39C-202ENST00000317571 ZNF564Q8TBZ8 553 aaPredicted RBP22.15■■□□□ 1.14
TTC39C-202ENST00000317571 ZNF653Q96CK0 615 aa22.15■■□□□ 1.14
TTC39C-202ENST00000317571 C18orf8Q96DM3 657 aa22.15■■□□□ 1.14
TTC39C-202ENST00000317571 BICD1Q96G01 975 aa22.15■■□□□ 1.14
TTC39C-202ENST00000317571 CEP89Q96ST8 783 aa22.15■■□□□ 1.14
TTC39C-202ENST00000317571 GTF2H1P32780 548 aa22.15■■□□□ 1.14
TTC39C-202ENST00000317571 PDCLQ13371 301 aa22.15■■□□□ 1.14
TTC39C-202ENST00000317571 XKR3Q5GH77 459 aa22.15■■□□□ 1.14
TTC39C-202ENST00000317571 ZBTB41Q5SVQ8 909 aa22.15■■□□□ 1.14
TTC39C-202ENST00000317571 TTC27Q6P3X3 843 aa22.15■■□□□ 1.14
TTC39C-202ENST00000317571 CNKSR2Q8WXI2 1034 aa22.15■■□□□ 1.14
TTC39C-202ENST00000317571 ZBTB45Q96K62 511 aaPredicted RBP22.15■■□□□ 1.14
TTC39C-202ENST00000317571 RPS6KC1Q96S38 1066 aa22.15■■□□□ 1.14
TTC39C-202ENST00000317571 PYGMP11217 842 aa22.14■■□□□ 1.13
TTC39C-202ENST00000317571 PDE6CP51160 858 aa22.14■■□□□ 1.13
TTC39C-202ENST00000317571 DR1Q01658 176 aa22.14■■□□□ 1.13
TTC39C-202ENST00000317571 ZNF844Q08AG5 666 aa22.14■■□□□ 1.13
TTC39C-202ENST00000317571 DUPD1Q68J44 220 aa22.14■■□□□ 1.13
TTC39C-202ENST00000317571 SCARA3Q6AZY7 606 aa22.14■■□□□ 1.13
TTC39C-202ENST00000317571 MIS18BP1Q6P0N0 1132 aa22.14■■□□□ 1.13
TTC39C-202ENST00000317571 CRELD2Q6UXH1 353 aaPredicted RBP22.14■■□□□ 1.13
TTC39C-202ENST00000317571 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.14■■□□□ 1.13
TTC39C-202ENST00000317571 CDHR1Q96JP9 859 aa22.14■■□□□ 1.13
TTC39C-202ENST00000317571 TMBIM4Q9HC24 238 aa22.14■■□□□ 1.13
TTC39C-202ENST00000317571 MAFBQ9Y5Q3 323 aaPredicted RBP22.14■■□□□ 1.13
TTC39C-202ENST00000317571 MIF4GDA9UHW6 222 aaKnown RBP22.14■■□□□ 1.13
TTC39C-202ENST00000317571 EIF3HO15372 352 aaKnown RBP eCLIP22.14■■□□□ 1.13
TTC39C-202ENST00000317571 DKC1O60832 514 aaKnown RBP eCLIP22.14■■□□□ 1.13
TTC39C-202ENST00000317571 PPFIA4O75335 1185 aa22.14■■□□□ 1.13
TTC39C-202ENST00000317571 GLRA2P23416 452 aa22.14■■□□□ 1.13
TTC39C-202ENST00000317571 PTGIRP43119 386 aa22.14■■□□□ 1.13
TTC39C-202ENST00000317571 NOL9Q5SY16 702 aaKnown RBP22.14■■□□□ 1.13
TTC39C-202ENST00000317571 ATP6V1G3Q96LB4 118 aa22.14■■□□□ 1.13
TTC39C-202ENST00000317571 SGIP1Q9BQI5 828 aa22.14■■□□□ 1.13
TTC39C-202ENST00000317571 RASSF4Q9H2L5 321 aa22.14■■□□□ 1.13
TTC39C-202ENST00000317571 R3HDMLQ9H3Y0 253 aa22.14■■□□□ 1.13
TTC39C-202ENST00000317571 ZDHHC18Q9NUE0 388 aa22.14■■□□□ 1.13
TTC39C-202ENST00000317571 GPRC5DQ9NZD1 345 aa22.14■■□□□ 1.13
TTC39C-202ENST00000317571 GTF3C4Q9UKN8 822 aa22.14■■□□□ 1.13
TTC39C-202ENST00000317571 ATG7O95352 703 aa22.13■■□□□ 1.13
TTC39C-202ENST00000317571 ACOT2P49753 483 aa22.13■■□□□ 1.13
TTC39C-202ENST00000317571 GNPTABQ3T906 1256 aa22.13■■□□□ 1.13
TTC39C-202ENST00000317571 SPOPLQ6IQ16 392 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms