RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 ZDHHC14Q8IZN3 488 aa4.96□□□□□ -1.62
SMCO3-201ENST00000316048 LILRA3Q8N6C8 439 aaPredicted RBP4.96□□□□□ -1.62
SMCO3-201ENST00000316048 REPS2Q8NFH8 660 aa4.96□□□□□ -1.62
SMCO3-201ENST00000316048 TMX3Q96JJ7 454 aa4.96□□□□□ -1.62
SMCO3-201ENST00000316048 MRGPRX4Q96LA9 322 aa4.96□□□□□ -1.62
SMCO3-201ENST00000316048 SIRT5Q9NXA8 310 aa4.96□□□□□ -1.62
SMCO3-201ENST00000316048 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.96□□□□□ -1.62
SMCO3-201ENST00000316048 ARHGEF11O15085 1522 aa4.96□□□□□ -1.62
SMCO3-201ENST00000316048 PRG4Q92954 1404 aaPredicted RBP4.96□□□□□ -1.62
SMCO3-201ENST00000316048 USP19O94966 1318 aa4.96□□□□□ -1.62
SMCO3-201ENST00000316048 RPTORQ8N122 1335 aa4.96□□□□□ -1.62
SMCO3-201ENST00000316048 CDK13Q14004 1512 aaKnown RBP4.96□□□□□ -1.62
SMCO3-201ENST00000316048 MAGI3Q5TCQ9 1506 aa4.96□□□□□ -1.62
SMCO3-201ENST00000316048 CCDC189A1A4V9 331 aa4.96□□□□□ -1.62
SMCO3-201ENST00000316048 FAM171A2A8MVW0 826 aa4.96□□□□□ -1.62
SMCO3-201ENST00000316048 H3BUI4 141 aa4.96□□□□□ -1.62
SMCO3-201ENST00000316048 HRKO00198 91 aa4.96□□□□□ -1.62
SMCO3-201ENST00000316048 PIP5K1CO60331 668 aa4.96□□□□□ -1.62
SMCO3-201ENST00000316048 TCEA3O75764 348 aa4.96□□□□□ -1.62
SMCO3-201ENST00000316048 PLA2G1BP04054 148 aaKnown RBP4.96□□□□□ -1.62
SMCO3-201ENST00000316048 KITP10721 976 aa4.96□□□□□ -1.62
SMCO3-201ENST00000316048 FPR1P21462 350 aa4.96□□□□□ -1.62
SMCO3-201ENST00000316048 NKX6-1P78426 367 aaPredicted RBP4.96□□□□□ -1.62
SMCO3-201ENST00000316048 CDC42EP1Q00587 391 aa4.96□□□□□ -1.62
SMCO3-201ENST00000316048 ADAM15Q13444 863 aa4.96□□□□□ -1.62
SMCO3-201ENST00000316048 INO80DQ53TQ3 878 aaPredicted RBP4.96□□□□□ -1.62
SMCO3-201ENST00000316048 OLFML2BQ68BL8 750 aa4.96□□□□□ -1.62
SMCO3-201ENST00000316048 LARP4Q71RC2 724 aaKnown RBP eCLIP4.96□□□□□ -1.62
SMCO3-201ENST00000316048 C11orf96Q7Z7L8 435 aa4.96□□□□□ -1.62
SMCO3-201ENST00000316048 TTC7BQ86TV6 843 aa4.96□□□□□ -1.62
SMCO3-201ENST00000316048 LIX1LQ8IVB5 337 aa4.96□□□□□ -1.62
SMCO3-201ENST00000316048 IFNL2Q8IZJ0 200 aa4.96□□□□□ -1.62
SMCO3-201ENST00000316048 KRT78Q8N1N4 520 aa4.96□□□□□ -1.62
SMCO3-201ENST00000316048 MZB1Q8WU39 189 aa4.96□□□□□ -1.62
SMCO3-201ENST00000316048 SNX33Q8WV41 574 aa4.96□□□□□ -1.62
SMCO3-201ENST00000316048 POF1BQ8WVV4 589 aa4.96□□□□□ -1.62
SMCO3-201ENST00000316048 KIAA1191Q96A73 305 aa4.96□□□□□ -1.62
SMCO3-201ENST00000316048 CDK5RAP3Q96JB5 506 aa4.96□□□□□ -1.62
SMCO3-201ENST00000316048 RIPOR3Q96MK2 946 aa4.96□□□□□ -1.62
SMCO3-201ENST00000316048 KIAA1683Q9H0B3 1180 aa4.96□□□□□ -1.62
SMCO3-201ENST00000316048 NSUN3Q9H649 340 aaKnown RBP4.96□□□□□ -1.62
SMCO3-201ENST00000316048 LMBRD1Q9NUN5 540 aa4.96□□□□□ -1.62
SMCO3-201ENST00000316048 PTPRGP23470 1445 aa4.96□□□□□ -1.62
SMCO3-201ENST00000316048 RASA4BC9J798 803 aa4.95□□□□□ -1.62
SMCO3-201ENST00000316048 MAFGO15525 162 aa4.95□□□□□ -1.62
SMCO3-201ENST00000316048 RASA4O43374 803 aa4.95□□□□□ -1.62
SMCO3-201ENST00000316048 ADAM23O75077 832 aa4.95□□□□□ -1.62
SMCO3-201ENST00000316048 LTA4HP09960 611 aaKnown RBP4.95□□□□□ -1.62
SMCO3-201ENST00000316048 SETSIPP0DME0 302 aa4.95□□□□□ -1.62
SMCO3-201ENST00000316048 MYF5P13349 255 aa4.95□□□□□ -1.62
SMCO3-201ENST00000316048 ECHS1P30084 290 aa4.95□□□□□ -1.62
SMCO3-201ENST00000316048 FOXO4P98177 505 aa4.95□□□□□ -1.62
SMCO3-201ENST00000316048 ANO1Q5XXA6 986 aa4.95□□□□□ -1.62
SMCO3-201ENST00000316048 TRMT10BQ6PF06 316 aaKnown RBP4.95□□□□□ -1.62
SMCO3-201ENST00000316048 DPP8Q6V1X1 898 aaPredicted RBP4.95□□□□□ -1.62
SMCO3-201ENST00000316048 ENAHQ8N8S7 591 aaPredicted RBP4.95□□□□□ -1.62
SMCO3-201ENST00000316048 KYQ8NBH2 561 aa4.95□□□□□ -1.62
SMCO3-201ENST00000316048 NUDT10Q8NFP7 164 aa4.95□□□□□ -1.62
SMCO3-201ENST00000316048 IFI44Q8TCB0 444 aa4.95□□□□□ -1.62
SMCO3-201ENST00000316048 STON2Q8WXE9 905 aa4.95□□□□□ -1.62
SMCO3-201ENST00000316048 PGBD4Q96DM1 585 aa4.95□□□□□ -1.62
SMCO3-201ENST00000316048 NUDT11Q96G61 164 aa4.95□□□□□ -1.62
SMCO3-201ENST00000316048 CRB3Q9BUF7 120 aa4.95□□□□□ -1.62
SMCO3-201ENST00000316048 ING3Q9NXR8 418 aa4.95□□□□□ -1.62
SMCO3-201ENST00000316048 TRPS1Q9UHF7 1281 aa4.95□□□□□ -1.62
SMCO3-201ENST00000316048 CDC23Q9UJX2 597 aa4.95□□□□□ -1.62
SMCO3-201ENST00000316048 PLB1Q6P1J6 1458 aa4.95□□□□□ -1.62
SMCO3-201ENST00000316048 PTPN23Q9H3S7 1636 aa4.95□□□□□ -1.62
SMCO3-201ENST00000316048 TROQ12816 1431 aaPredicted RBP4.94□□□□□ -1.62
SMCO3-201ENST00000316048 F5H423 210 aaPredicted RBP4.94□□□□□ -1.62
SMCO3-201ENST00000316048 TNFSF4P23510 183 aa4.94□□□□□ -1.62
SMCO3-201ENST00000316048 PCSK1P29120 753 aa4.94□□□□□ -1.62
SMCO3-201ENST00000316048 TRIM14Q14142 442 aa4.94□□□□□ -1.62
SMCO3-201ENST00000316048 POLD3Q15054 466 aaPredicted RBP4.94□□□□□ -1.62
SMCO3-201ENST00000316048 TARBP2Q15633 366 aaKnown RBP4.94□□□□□ -1.62
SMCO3-201ENST00000316048 CXXC5Q7LFL8 322 aaKnown RBP4.94□□□□□ -1.62
SMCO3-201ENST00000316048 PQLC1Q8N2U9 271 aa4.94□□□□□ -1.62
SMCO3-201ENST00000316048 OR2C3Q8N628 320 aa4.94□□□□□ -1.62
SMCO3-201ENST00000316048 LINC00482Q8N8I6 264 aa4.94□□□□□ -1.62
SMCO3-201ENST00000316048 IL31RAQ8NI17 732 aa4.94□□□□□ -1.62
SMCO3-201ENST00000316048 GCM1Q9NP62 436 aa4.94□□□□□ -1.62
SMCO3-201ENST00000316048 GPRC5BQ9NZH0 403 aa4.94□□□□□ -1.62
SMCO3-201ENST00000316048 CPA4Q9UI42 421 aa4.94□□□□□ -1.62
SMCO3-201ENST00000316048 TCOF1Q13428 1488 aaKnown RBP4.94□□□□□ -1.62
SMCO3-201ENST00000316048 CHD1O14646 1710 aa4.94□□□□□ -1.62
SMCO3-201ENST00000316048 RHPN2P1A8MT19 583 aa4.94□□□□□ -1.62
SMCO3-201ENST00000316048 F8W8V4 182 aa4.94□□□□□ -1.62
SMCO3-201ENST00000316048 SGTAO43765 313 aa4.94□□□□□ -1.62
SMCO3-201ENST00000316048 MGEA5O60502 916 aa4.94□□□□□ -1.62
SMCO3-201ENST00000316048 KLHL18O94889 574 aa4.94□□□□□ -1.62
SMCO3-201ENST00000316048 HMGCRP04035 888 aa4.94□□□□□ -1.62
SMCO3-201ENST00000316048 ABCB4P21439 1286 aa4.94□□□□□ -1.62
SMCO3-201ENST00000316048 SREBF1P36956 1147 aa4.94□□□□□ -1.62
SMCO3-201ENST00000316048 IL12RB1P42701 662 aa4.94□□□□□ -1.62
SMCO3-201ENST00000316048 CASP5P51878 434 aa4.94□□□□□ -1.62
SMCO3-201ENST00000316048 RRADP55042 308 aa4.94□□□□□ -1.62
SMCO3-201ENST00000316048 IFIT5Q13325 482 aaKnown RBP4.94□□□□□ -1.62
SMCO3-201ENST00000316048 TOP3AQ13472 1001 aaPredicted RBP4.94□□□□□ -1.62
SMCO3-201ENST00000316048 SNAPC2Q13487 334 aa4.94□□□□□ -1.62
SMCO3-201ENST00000316048 EIF4HQ15056 248 aaKnown RBP4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms