RNA–Protein interactions for RNA: ENST00000315585.11

CHFR-202, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-202ENST00000315585 KCTD16Q68DU8 428 aa16.04■□□□□ 0.16
CHFR-202ENST00000315585 MAP4K3Q8IVH8 894 aa16.04■□□□□ 0.16
CHFR-202ENST00000315585 UBLCP1Q8WVY7 318 aaPredicted RBP16.04■□□□□ 0.16
CHFR-202ENST00000315585 FMO2Q99518 471 aa16.04■□□□□ 0.16
CHFR-202ENST00000315585 ERP44Q9BS26 406 aa16.04■□□□□ 0.16
CHFR-202ENST00000315585 PLEKHA4Q9H4M7 779 aa16.04■□□□□ 0.16
CHFR-202ENST00000315585 COQ4Q9Y3A0 265 aa16.04■□□□□ 0.16
CHFR-202ENST00000315585 CCDC169A6NNP5 214 aa16.04■□□□□ 0.16
CHFR-202ENST00000315585 NDUFAB1O14561 156 aa16.04■□□□□ 0.16
CHFR-202ENST00000315585 SLC16A4O15374 487 aa16.04■□□□□ 0.16
CHFR-202ENST00000315585 TTI1O43156 1089 aa16.04■□□□□ 0.16
CHFR-202ENST00000315585 DAPK3O43293 454 aa16.04■□□□□ 0.16
CHFR-202ENST00000315585 ATP9AO75110 1047 aa16.04■□□□□ 0.16
CHFR-202ENST00000315585 ZC3H11AO75152 810 aaKnown RBP eCLIP16.04■□□□□ 0.16
CHFR-202ENST00000315585 PSAPP07602 524 aa16.04■□□□□ 0.16
CHFR-202ENST00000315585 USP8P40818 1118 aa16.04■□□□□ 0.16
CHFR-202ENST00000315585 DLG4P78352 724 aa16.04■□□□□ 0.16
CHFR-202ENST00000315585 DLK2Q6UY11 383 aa16.04■□□□□ 0.16
CHFR-202ENST00000315585 DNAAF5Q86Y56 855 aa16.04■□□□□ 0.16
CHFR-202ENST00000315585 C3orf20Q8ND61 904 aa16.04■□□□□ 0.16
CHFR-202ENST00000315585 MCPH1Q8NEM0 835 aa16.04■□□□□ 0.16
CHFR-202ENST00000315585 NT5C1BQ96P26 610 aa16.04■□□□□ 0.16
CHFR-202ENST00000315585 SPATC1LQ9H0A9 340 aa16.04■□□□□ 0.16
CHFR-202ENST00000315585 TMEM117Q9H0C3 514 aa16.04■□□□□ 0.16
CHFR-202ENST00000315585 FEZ2Q9UHY8 353 aaPredicted RBP16.04■□□□□ 0.16
CHFR-202ENST00000315585 A0A0G2JMZ2 1700 aa16.03■□□□□ 0.16
CHFR-202ENST00000315585 ITGA4P13612 1032 aa16.03■□□□□ 0.16
CHFR-202ENST00000315585 PDE6CP51160 858 aa16.03■□□□□ 0.16
CHFR-202ENST00000315585 GPC3P51654 580 aa16.03■□□□□ 0.16
CHFR-202ENST00000315585 RTP1P59025 263 aa16.03■□□□□ 0.16
CHFR-202ENST00000315585 POU5F1Q01860 360 aaKnown RBP16.03■□□□□ 0.16
CHFR-202ENST00000315585 EAPPQ56P03 285 aaPredicted RBP16.03■□□□□ 0.16
CHFR-202ENST00000315585 HOOK3Q86VS8 718 aa16.03■□□□□ 0.16
CHFR-202ENST00000315585 CNKSR2Q8WXI2 1034 aa16.03■□□□□ 0.16
CHFR-202ENST00000315585 EPN3Q9H201 632 aa16.03■□□□□ 0.16
CHFR-202ENST00000315585 KIAA1586Q9HCI6 787 aa16.03■□□□□ 0.16
CHFR-202ENST00000315585 KMT5AQ9NQR1 393 aa16.03■□□□□ 0.16
CHFR-202ENST00000315585 GRIN2DO15399 1336 aa16.03■□□□□ 0.16
CHFR-202ENST00000315585 ATXN2Q99700 1313 aaKnown RBP16.03■□□□□ 0.16
CHFR-202ENST00000315585 SPATA31C2B4DYI2 1134 aa16.03■□□□□ 0.16
CHFR-202ENST00000315585 BACH1O14867 736 aa16.03■□□□□ 0.16
CHFR-202ENST00000315585 CNGA1P29973 690 aa16.03■□□□□ 0.16
CHFR-202ENST00000315585 MDH1P40925 334 aaKnown RBP16.03■□□□□ 0.16
CHFR-202ENST00000315585 CCT5P48643 541 aa16.03■□□□□ 0.16
CHFR-202ENST00000315585 PPM1KQ8N3J5 372 aa16.03■□□□□ 0.16
CHFR-202ENST00000315585 FBXL13Q8NEE6 735 aa16.03■□□□□ 0.16
CHFR-202ENST00000315585 SHC3Q92529 594 aa16.03■□□□□ 0.16
CHFR-202ENST00000315585 ARHGEF26Q96DR7 871 aa16.03■□□□□ 0.16
CHFR-202ENST00000315585 JPH1Q9HDC5 661 aaPredicted RBP16.03■□□□□ 0.16
CHFR-202ENST00000315585 KIAA0391O15091 583 aaKnown RBP16.02■□□□□ 0.16
CHFR-202ENST00000315585 KCNA2P16389 499 aa16.02■□□□□ 0.16
CHFR-202ENST00000315585 ICAM3P32942 547 aa16.02■□□□□ 0.16
CHFR-202ENST00000315585 PTPROQ16827 1216 aa16.02■□□□□ 0.16
CHFR-202ENST00000315585 BRDTQ58F21 947 aaPredicted RBP16.02■□□□□ 0.16
CHFR-202ENST00000315585 ODF2Q5BJF6 829 aa16.02■□□□□ 0.16
CHFR-202ENST00000315585 TMC3Q7Z5M5 1100 aa16.02■□□□□ 0.16
CHFR-202ENST00000315585 ARHGEF19Q8IW93 802 aa16.02■□□□□ 0.16
CHFR-202ENST00000315585 C10orf67Q8IYJ2 551 aa16.02■□□□□ 0.16
CHFR-202ENST00000315585 TMEM161BQ8NDZ6 487 aa16.02■□□□□ 0.16
CHFR-202ENST00000315585 EPS8L1Q8TE68 723 aa16.02■□□□□ 0.16
CHFR-202ENST00000315585 CLMNQ96JQ2 1002 aa16.02■□□□□ 0.16
CHFR-202ENST00000315585 ZSWIM1Q9BR11 485 aa16.02■□□□□ 0.16
CHFR-202ENST00000315585 ASCC2Q9H1I8 757 aaPredicted RBP16.02■□□□□ 0.16
CHFR-202ENST00000315585 TAS2R14Q9NYV8 317 aa16.02■□□□□ 0.16
CHFR-202ENST00000315585 BTBD7Q9P203 1132 aa16.02■□□□□ 0.16
CHFR-202ENST00000315585 SLC9A2Q9UBY0 812 aa16.02■□□□□ 0.16
CHFR-202ENST00000315585 MTRF1LQ9UGC7 380 aaKnown RBP16.02■□□□□ 0.16
CHFR-202ENST00000315585 GTF3C4Q9UKN8 822 aa16.02■□□□□ 0.16
CHFR-202ENST00000315585 A0A087WUV0 522 aaPredicted RBP16.02■□□□□ 0.15
CHFR-202ENST00000315585 PHF2O75151 1096 aa16.02■□□□□ 0.15
CHFR-202ENST00000315585 DGAT1O75907 488 aa16.02■□□□□ 0.15
CHFR-202ENST00000315585 CCNE2O96020 404 aa16.02■□□□□ 0.15
CHFR-202ENST00000315585 GARTP22102 1010 aa16.02■□□□□ 0.15
CHFR-202ENST00000315585 LSP1P33241 339 aa16.02■□□□□ 0.15
CHFR-202ENST00000315585 DHX9Q08211 1270 aaKnown RBP16.02■□□□□ 0.15
CHFR-202ENST00000315585 IFFO1Q0D2I5 559 aa16.02■□□□□ 0.15
CHFR-202ENST00000315585 TRADDQ15628 312 aa16.02■□□□□ 0.15
CHFR-202ENST00000315585 FOXR1Q6PIV2 292 aa16.02■□□□□ 0.15
CHFR-202ENST00000315585 NCAPG2Q86XI2 1143 aa16.02■□□□□ 0.15
CHFR-202ENST00000315585 PARD3BQ8TEW8 1205 aa16.02■□□□□ 0.15
CHFR-202ENST00000315585 GTF3C2Q8WUA4 911 aaPredicted RBP16.02■□□□□ 0.15
CHFR-202ENST00000315585 OPTNQ96CV9 577 aa16.02■□□□□ 0.15
CHFR-202ENST00000315585 IFT74Q96LB3 600 aa16.02■□□□□ 0.15
CHFR-202ENST00000315585 H0YGN5 161 aa16.01■□□□□ 0.15
CHFR-202ENST00000315585 PPFIA2O75334 1257 aa16.01■□□□□ 0.15
CHFR-202ENST00000315585 NPTX2P47972 431 aa16.01■□□□□ 0.15
CHFR-202ENST00000315585 BPIFB4P59827 614 aa16.01■□□□□ 0.15
CHFR-202ENST00000315585 CDR2Q01850 454 aa16.01■□□□□ 0.15
CHFR-202ENST00000315585 DUPD1Q68J44 220 aa16.01■□□□□ 0.15
CHFR-202ENST00000315585 MIS18BP1Q6P0N0 1132 aa16.01■□□□□ 0.15
CHFR-202ENST00000315585 SH2D3CQ8N5H7 860 aa16.01■□□□□ 0.15
CHFR-202ENST00000315585 SLC20A1Q8WUM9 679 aa16.01■□□□□ 0.15
CHFR-202ENST00000315585 MAIP1Q8WWC4 291 aa16.01■□□□□ 0.15
CHFR-202ENST00000315585 TRIM11Q96F44 468 aa16.01■□□□□ 0.15
CHFR-202ENST00000315585 MFSD14AQ96MC6 490 aa16.01■□□□□ 0.15
CHFR-202ENST00000315585 FBXL18Q96ME1 805 aa16.01■□□□□ 0.15
CHFR-202ENST00000315585 PCYOX1Q9UHG3 505 aa16.01■□□□□ 0.15
CHFR-202ENST00000315585 COG5Q9UP83 839 aa16.01■□□□□ 0.15
CHFR-202ENST00000315585 NFS1Q9Y697 457 aa16.01■□□□□ 0.15
CHFR-202ENST00000315585 IGSF9BQ9UPX0 1349 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms