RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 MEGF6O75095 1541 aa14.61□□□□□ -0.07
SPAST-201ENST00000315285 RWDD4Q6NW29 188 aaKnown RBP14.61□□□□□ -0.07
SPAST-201ENST00000315285 TRMT10CQ7L0Y3 403 aaKnown RBP14.61□□□□□ -0.07
SPAST-201ENST00000315285 DDX42Q86XP3 938 aaKnown RBP eCLIP14.61□□□□□ -0.07
SPAST-201ENST00000315285 JAMLQ86YT9 394 aa14.61□□□□□ -0.07
SPAST-201ENST00000315285 HIPK4Q8NE63 616 aa14.61□□□□□ -0.07
SPAST-201ENST00000315285 VPS39Q96JC1 886 aa14.61□□□□□ -0.07
SPAST-201ENST00000315285 FAM217BQ9NTX9 383 aaPredicted RBP14.61□□□□□ -0.07
SPAST-201ENST00000315285 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.61□□□□□ -0.07
SPAST-201ENST00000315285 FOXP2O15409 715 aa14.61□□□□□ -0.07
SPAST-201ENST00000315285 PLA2G4AP47712 749 aa14.61□□□□□ -0.07
SPAST-201ENST00000315285 KIF22Q14807 665 aa14.61□□□□□ -0.07
SPAST-201ENST00000315285 HIF1AQ16665 826 aa14.61□□□□□ -0.07
SPAST-201ENST00000315285 GRAMD1BQ3KR37 738 aa14.61□□□□□ -0.07
SPAST-201ENST00000315285 VPS11Q9H270 941 aa14.61□□□□□ -0.07
SPAST-201ENST00000315285 THEGQ9P2T0 379 aa14.61□□□□□ -0.07
SPAST-201ENST00000315285 STOML1Q9UBI4 398 aa14.61□□□□□ -0.07
SPAST-201ENST00000315285 CHN1P15882 459 aa14.61□□□□□ -0.07
SPAST-201ENST00000315285 LSP1P33241 339 aa14.61□□□□□ -0.07
SPAST-201ENST00000315285 CASP2P42575 452 aa14.61□□□□□ -0.07
SPAST-201ENST00000315285 IRAK1P51617 712 aa14.61□□□□□ -0.07
SPAST-201ENST00000315285 EFNA5P52803 228 aa14.61□□□□□ -0.07
SPAST-201ENST00000315285 CASP7P55210 303 aa14.61□□□□□ -0.07
SPAST-201ENST00000315285 CDH6P55285 790 aa14.61□□□□□ -0.07
SPAST-201ENST00000315285 NFX1Q12986 1120 aaKnown RBP14.61□□□□□ -0.07
SPAST-201ENST00000315285 HEATR6Q6AI08 1181 aaKnown RBP14.61□□□□□ -0.07
SPAST-201ENST00000315285 TTC39CQ8N584 583 aa14.61□□□□□ -0.07
SPAST-201ENST00000315285 CPA5Q8WXQ8 436 aa14.61□□□□□ -0.07
SPAST-201ENST00000315285 PRMT1Q99873 361 aaKnown RBP14.61□□□□□ -0.07
SPAST-201ENST00000315285 ISCUQ9H1K1 167 aa14.61□□□□□ -0.07
SPAST-201ENST00000315285 SENP1Q9P0U3 644 aa14.61□□□□□ -0.07
SPAST-201ENST00000315285 KDM6AO15550 1401 aaPredicted RBP14.61□□□□□ -0.07
SPAST-201ENST00000315285 TCP11X1B4DZS4 312 aa14.61□□□□□ -0.07
SPAST-201ENST00000315285 PI4K2BG5E9Z4 385 aa14.61□□□□□ -0.07
SPAST-201ENST00000315285 HUS1O60921 280 aa14.61□□□□□ -0.07
SPAST-201ENST00000315285 ITIH2P19823 946 aa14.61□□□□□ -0.07
SPAST-201ENST00000315285 CIITAP33076 1130 aa14.61□□□□□ -0.07
SPAST-201ENST00000315285 DRP2Q13474 957 aa14.61□□□□□ -0.07
SPAST-201ENST00000315285 AP1ARQ63HQ0 302 aa14.61□□□□□ -0.07
SPAST-201ENST00000315285 KLC3Q6P597 504 aa14.61□□□□□ -0.07
SPAST-201ENST00000315285 KCTD17Q8N5Z5 321 aa14.61□□□□□ -0.07
SPAST-201ENST00000315285 BEST2Q8NFU1 509 aa14.61□□□□□ -0.07
SPAST-201ENST00000315285 KLC4Q9NSK0 619 aa14.61□□□□□ -0.07
SPAST-201ENST00000315285 CDH16O75309 829 aa14.6□□□□□ -0.07
SPAST-201ENST00000315285 MX2P20592 715 aa14.6□□□□□ -0.07
SPAST-201ENST00000315285 ACOT2P49753 483 aa14.6□□□□□ -0.07
SPAST-201ENST00000315285 SATB1Q01826 763 aa14.6□□□□□ -0.07
SPAST-201ENST00000315285 CDR2Q01850 454 aa14.6□□□□□ -0.07
SPAST-201ENST00000315285 XKR3Q5GH77 459 aa14.6□□□□□ -0.07
SPAST-201ENST00000315285 DHX38Q92620 1227 aaKnown RBP14.6□□□□□ -0.07
SPAST-201ENST00000315285 SLC10A4Q96EP9 437 aa14.6□□□□□ -0.07
SPAST-201ENST00000315285 FAM96AQ9H5X1 160 aa14.6□□□□□ -0.07
SPAST-201ENST00000315285 KLHL11Q9NVR0 708 aa14.6□□□□□ -0.07
SPAST-201ENST00000315285 EHD2Q9NZN4 543 aa14.6□□□□□ -0.07
SPAST-201ENST00000315285 SUCLA2Q9P2R7 463 aaPredicted RBP14.6□□□□□ -0.07
SPAST-201ENST00000315285 ALG6Q9Y672 507 aa14.6□□□□□ -0.07
SPAST-201ENST00000315285 WDR46O15213 610 aaKnown RBP14.6□□□□□ -0.07
SPAST-201ENST00000315285 KITP10721 976 aa14.6□□□□□ -0.07
SPAST-201ENST00000315285 COMTP21964 271 aa14.6□□□□□ -0.07
SPAST-201ENST00000315285 AGBL2Q5U5Z8 902 aa14.6□□□□□ -0.07
SPAST-201ENST00000315285 INTS5Q6P9B9 1019 aaKnown RBP14.6□□□□□ -0.07
SPAST-201ENST00000315285 SPATA21Q7Z572 469 aa14.6□□□□□ -0.07
SPAST-201ENST00000315285 FAF1Q9UNN5 650 aaPredicted RBP14.6□□□□□ -0.07
SPAST-201ENST00000315285 FNDC3AQ9Y2H6 1198 aaKnown RBP14.6□□□□□ -0.07
SPAST-201ENST00000315285 CNTNAP4Q9C0A0 1308 aa14.6□□□□□ -0.07
SPAST-201ENST00000315285 TRPA1O75762 1119 aa14.6□□□□□ -0.07
SPAST-201ENST00000315285 TTLL4Q14679 1199 aa14.6□□□□□ -0.07
SPAST-201ENST00000315285 FIGNQ5HY92 759 aa14.6□□□□□ -0.07
SPAST-201ENST00000315285 WDR93Q6P2C0 686 aa14.6□□□□□ -0.07
SPAST-201ENST00000315285 LPAR1Q92633 364 aa14.6□□□□□ -0.07
SPAST-201ENST00000315285 CELF4Q9BZC1 486 aaKnown RBP14.6□□□□□ -0.07
SPAST-201ENST00000315285 VCPKMTQ9H867 229 aa14.6□□□□□ -0.07
SPAST-201ENST00000315285 A0A087X0T9 212 aa14.6□□□□□ -0.07
SPAST-201ENST00000315285 FAM228BP0C875 321 aa14.6□□□□□ -0.07
SPAST-201ENST00000315285 CYP11B2P19099 503 aa14.6□□□□□ -0.07
SPAST-201ENST00000315285 HMGCS2P54868 508 aa14.6□□□□□ -0.07
SPAST-201ENST00000315285 MTMR2Q13614 643 aa14.6□□□□□ -0.07
SPAST-201ENST00000315285 BAATQ14032 418 aaPredicted RBP14.6□□□□□ -0.07
SPAST-201ENST00000315285 PDE1CQ14123 709 aaPredicted RBP14.6□□□□□ -0.07
SPAST-201ENST00000315285 ZC3H18Q86VM9 953 aaKnown RBP14.6□□□□□ -0.07
SPAST-201ENST00000315285 RYBPQ8N488 228 aaPredicted RBP14.6□□□□□ -0.07
SPAST-201ENST00000315285 RNF149Q8NC42 400 aa14.6□□□□□ -0.07
SPAST-201ENST00000315285 RBM15Q96T37 977 aaKnown RBP eCLIP14.6□□□□□ -0.07
SPAST-201ENST00000315285 RIT2Q99578 217 aa14.6□□□□□ -0.07
SPAST-201ENST00000315285 TRABDQ9H4I3 376 aa14.6□□□□□ -0.07
SPAST-201ENST00000315285 DUSP10Q9Y6W6 482 aa14.6□□□□□ -0.07
SPAST-201ENST00000315285 CCDC195A0A1B0GUA6 201 aa14.59□□□□□ -0.07
SPAST-201ENST00000315285 TYW5A2RUC4 315 aaKnown RBP14.59□□□□□ -0.07
SPAST-201ENST00000315285 TRIM66O15016 1216 aa14.59□□□□□ -0.07
SPAST-201ENST00000315285 CHRNA5P30532 468 aa14.59□□□□□ -0.07
SPAST-201ENST00000315285 RCOR2Q8IZ40 523 aa14.59□□□□□ -0.07
SPAST-201ENST00000315285 TMEM117Q9H0C3 514 aa14.59□□□□□ -0.07
SPAST-201ENST00000315285 PXDNQ92626 1479 aa14.59□□□□□ -0.07
SPAST-201ENST00000315285 ARHGEF28Q8N1W1 1705 aaKnown RBP14.59□□□□□ -0.07
SPAST-201ENST00000315285 KPNA7A9QM74 516 aa14.59□□□□□ -0.07
SPAST-201ENST00000315285 PKN1Q16512 942 aa14.59□□□□□ -0.07
SPAST-201ENST00000315285 LONRF1Q17RB8 773 aa14.59□□□□□ -0.07
SPAST-201ENST00000315285 TRIM67Q6ZTA4 783 aa14.59□□□□□ -0.07
SPAST-201ENST00000315285 CDKL3Q8IVW4 592 aaPredicted RBP14.59□□□□□ -0.07
SPAST-201ENST00000315285 ERP44Q9BS26 406 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms