RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.6□□□□□ -1.356e-6■■■■□ 24.9
PRKDC-201ENST00000314191 RDM1Q8NG50 284 aa6.6□□□□□ -1.35
PRKDC-201ENST00000314191 PRPF31Q8WWY3 499 aaKnown RBP6.6□□□□□ -1.35
PRKDC-201ENST00000314191 ANKZF1Q9H8Y5 726 aa6.6□□□□□ -1.35
PRKDC-201ENST00000314191 KLHL11Q9NVR0 708 aa6.6□□□□□ -1.35
PRKDC-201ENST00000314191 PFASO15067 1338 aa6.6□□□□□ -1.35
PRKDC-201ENST00000314191 ACSL3O95573 720 aa6.6□□□□□ -1.35
PRKDC-201ENST00000314191 CNTN2Q02246 1040 aa6.6□□□□□ -1.35
PRKDC-201ENST00000314191 KIF1AQ12756 1690 aa6.6□□□□□ -1.35
PRKDC-201ENST00000314191 KRT14P02533 472 aa6.6□□□□□ -1.35
PRKDC-201ENST00000314191 MUTP22033 750 aa6.6□□□□□ -1.35
PRKDC-201ENST00000314191 EFCAB12Q6NXP0 572 aa6.6□□□□□ -1.35
PRKDC-201ENST00000314191 ERO1BQ86YB8 467 aa6.6□□□□□ -1.35
PRKDC-201ENST00000314191 ASTN1O14525 1302 aa6.6□□□□□ -1.35
PRKDC-201ENST00000314191 XRN1Q8IZH2 1706 aaKnown RBP6.6□□□□□ -1.35
PRKDC-201ENST00000314191 TGFB1I1O43294 461 aa6.6□□□□□ -1.35
PRKDC-201ENST00000314191 TNFAIP2Q03169 654 aa6.6□□□□□ -1.35
PRKDC-201ENST00000314191 ORC1Q13415 861 aa6.6□□□□□ -1.35
PRKDC-201ENST00000314191 BEND6Q5SZJ8 279 aaPredicted RBP6.6□□□□□ -1.35
PRKDC-201ENST00000314191 P3H4Q92791 437 aa6.6□□□□□ -1.35
PRKDC-201ENST00000314191 RBM41Q96IZ5 413 aaKnown RBP6.6□□□□□ -1.35
PRKDC-201ENST00000314191 PDGFDQ9GZP0 370 aaPredicted RBP6.6□□□□□ -1.35
PRKDC-201ENST00000314191 PRPSAP2O60256 369 aa6.6□□□□□ -1.35
PRKDC-201ENST00000314191 GBP1P32455 592 aa6.6□□□□□ -1.35
PRKDC-201ENST00000314191 SPOPLQ6IQ16 392 aa6.6□□□□□ -1.35
PRKDC-201ENST00000314191 HDAC7Q8WUI4 952 aa6.6□□□□□ -1.35
PRKDC-201ENST00000314191 NID2Q14112 1375 aa6.6□□□□□ -1.35
PRKDC-201ENST00000314191 DHX38Q92620 1227 aaKnown RBP6.6□□□□□ -1.35
PRKDC-201ENST00000314191 TMEM117Q9H0C3 514 aa6.6□□□□□ -1.35
PRKDC-201ENST00000314191 SLITRK6Q9H5Y7 841 aa6.6□□□□□ -1.35
PRKDC-201ENST00000314191 MON2Q7Z3U7 1717 aa6.6□□□□□ -1.35
PRKDC-201ENST00000314191 ARSHQ5FYA8 562 aa6.6□□□□□ -1.35
PRKDC-201ENST00000314191 ACSF2Q96CM8 615 aaPredicted RBP6.6□□□□□ -1.35
PRKDC-201ENST00000314191 ADAM33Q9BZ11 813 aa6.6□□□□□ -1.35
PRKDC-201ENST00000314191 WNT8AQ9H1J5 351 aa6.6□□□□□ -1.35
PRKDC-201ENST00000314191 PCDHB2Q9Y5E7 798 aa6.6□□□□□ -1.35
PRKDC-201ENST00000314191 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.6□□□□□ -1.35
PRKDC-201ENST00000314191 SLIT2O94813 1529 aa6.6□□□□□ -1.35
PRKDC-201ENST00000314191 A8MXQ7 604 aa6.6□□□□□ -1.35
PRKDC-201ENST00000314191 M0QYV0 167 aa6.6□□□□□ -1.35
PRKDC-201ENST00000314191 EXTL3O43909 919 aa6.6□□□□□ -1.35
PRKDC-201ENST00000314191 SLC12A3P55017 1021 aa6.6□□□□□ -1.35
PRKDC-201ENST00000314191 PPP3CAQ08209 521 aa6.6□□□□□ -1.35
PRKDC-201ENST00000314191 FKBP1CQ5VVH2 108 aa6.6□□□□□ -1.35
PRKDC-201ENST00000314191 P2RX7Q99572 595 aaKnown RBP6.6□□□□□ -1.35
PRKDC-201ENST00000314191 SAYSD1Q9NPB0 183 aa6.6□□□□□ -1.35
PRKDC-201ENST00000314191 BAIAP2L1Q9UHR4 511 aa6.6□□□□□ -1.35
PRKDC-201ENST00000314191 REXO2Q9Y3B8 237 aaKnown RBP6.6□□□□□ -1.35
PRKDC-201ENST00000314191 PHBP35232 272 aa6.6□□□□□ -1.35
PRKDC-201ENST00000314191 CLCN3P51790 818 aa6.6□□□□□ -1.35
PRKDC-201ENST00000314191 DLG4P78352 724 aa6.6□□□□□ -1.35
PRKDC-201ENST00000314191 UVRAGQ9P2Y5 699 aa6.6□□□□□ -1.35
PRKDC-201ENST00000314191 CCL15-CCL14A0A0B4J2E2 113 aa6.59□□□□□ -1.35
PRKDC-201ENST00000314191 STK10O94804 968 aaKnown RBP6.59□□□□□ -1.35
PRKDC-201ENST00000314191 CYP2B6P20813 491 aa6.59□□□□□ -1.35
PRKDC-201ENST00000314191 AP3M2P53677 418 aa6.59□□□□□ -1.35
PRKDC-201ENST00000314191 IFT88Q13099 833 aa6.59□□□□□ -1.35
PRKDC-201ENST00000314191 DHX34Q14147 1143 aaKnown RBP6.59□□□□□ -1.35
PRKDC-201ENST00000314191 CCL15Q16663 113 aa6.59□□□□□ -1.35
PRKDC-201ENST00000314191 LY6KQ17RY6 165 aa6.59□□□□□ -1.35
PRKDC-201ENST00000314191 KIAA1755Q5JYT7 1200 aa6.59□□□□□ -1.35
PRKDC-201ENST00000314191 C6orf163Q5TEZ5 329 aa6.59□□□□□ -1.35
PRKDC-201ENST00000314191 HNRNPLLQ8WVV9 542 aaKnown RBP6.59□□□□□ -1.35
PRKDC-201ENST00000314191 PPM1EQ8WY54 764 aa6.59□□□□□ -1.35
PRKDC-201ENST00000314191 ZBTB45Q96K62 511 aaPredicted RBP6.59□□□□□ -1.35
PRKDC-201ENST00000314191 UBIAD1Q9Y5Z9 338 aa6.59□□□□□ -1.35
PRKDC-201ENST00000314191 PTPRAP18433 802 aa6.59□□□□□ -1.35
PRKDC-201ENST00000314191 RFC5P40937 340 aa6.59□□□□□ -1.35
PRKDC-201ENST00000314191 MAGOHP61326 146 aaKnown RBP6.59□□□□□ -1.35
PRKDC-201ENST00000314191 DSTYKQ6XUX3 929 aa6.59□□□□□ -1.35
PRKDC-201ENST00000314191 MORC4Q8TE76 937 aa6.59□□□□□ -1.35
PRKDC-201ENST00000314191 LRRC4Q9HBW1 653 aa6.59□□□□□ -1.35
PRKDC-201ENST00000314191 MAP3K20Q9NYL2 800 aaKnown RBP6.59□□□□□ -1.35
PRKDC-201ENST00000314191 AIPL1Q9NZN9 384 aa6.59□□□□□ -1.35
PRKDC-201ENST00000314191 HPCAL4Q9UM19 191 aa6.59□□□□□ -1.35
PRKDC-201ENST00000314191 H3BQF6 201 aa6.59□□□□□ -1.35
PRKDC-201ENST00000314191 CALB1P05937 261 aa6.59□□□□□ -1.35
PRKDC-201ENST00000314191 ZSCAN20P17040 1043 aaPredicted RBP6.59□□□□□ -1.35
PRKDC-201ENST00000314191 GTF2H1P32780 548 aa6.59□□□□□ -1.35
PRKDC-201ENST00000314191 ATP11AP98196 1134 aa6.59□□□□□ -1.35
PRKDC-201ENST00000314191 CBWD6Q4V339 395 aa6.59□□□□□ -1.35
PRKDC-201ENST00000314191 CBWD3Q5JTY5 395 aa6.59□□□□□ -1.35
PRKDC-201ENST00000314191 CBWD5Q5RIA9 395 aa6.59□□□□□ -1.35
PRKDC-201ENST00000314191 HP1BP3Q5SSJ5 553 aaPredicted RBP6.59□□□□□ -1.35
PRKDC-201ENST00000314191 SV2AQ7L0J3 742 aa6.59□□□□□ -1.35
PRKDC-201ENST00000314191 RSPH3Q86UC2 560 aa6.59□□□□□ -1.35
PRKDC-201ENST00000314191 SMARCAD1Q9H4L7 1026 aa6.59□□□□□ -1.35
PRKDC-201ENST00000314191 KRT17Q04695 432 aa6.59□□□□□ -1.35
PRKDC-201ENST00000314191 FAM47EQ6ZV65 393 aa6.59□□□□□ -1.35
PRKDC-201ENST00000314191 SLC38A10Q9HBR0 1119 aa6.59□□□□□ -1.35
PRKDC-201ENST00000314191 FRMPD4Q14CM0 1322 aa6.59□□□□□ -1.35
PRKDC-201ENST00000314191 GOLGA8MH3BSY2 632 aa6.59□□□□□ -1.35
PRKDC-201ENST00000314191 HUS1O60921 280 aa6.59□□□□□ -1.35
PRKDC-201ENST00000314191 CSDE1O75534 798 aaKnown RBP6.59□□□□□ -1.35
PRKDC-201ENST00000314191 MYCP01106 439 aaPredicted RBP6.59□□□□□ -1.35
PRKDC-201ENST00000314191 PPP2R5CQ13362 524 aa6.59□□□□□ -1.35
PRKDC-201ENST00000314191 ELAC2Q9BQ52 826 aaKnown RBP6.59□□□□□ -1.35
PRKDC-201ENST00000314191 VIPAS39Q9H9C1 493 aa6.59□□□□□ -1.35
PRKDC-201ENST00000314191 FAM187AA6NFU0 413 aa6.59□□□□□ -1.35
PRKDC-201ENST00000314191 ZSCAN5CA6NGD5 496 aaPredicted RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms