RNA–Protein interactions for RNA: ENST00000311487.9

HMGA1-201, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-201ENST00000311487 AKAP3O75969 853 aa19.8■□□□□ 0.76
HMGA1-201ENST00000311487 CXCL8P10145 99 aa19.8■□□□□ 0.76
HMGA1-201ENST00000311487 SCP2P22307 547 aa19.8■□□□□ 0.76
HMGA1-201ENST00000311487 ZNF165P49910 485 aa19.8■□□□□ 0.76
HMGA1-201ENST00000311487 WDR5P61964 334 aaKnown RBP19.8■□□□□ 0.76
HMGA1-201ENST00000311487 LUZP1Q86V48 1076 aa19.8■□□□□ 0.76
HMGA1-201ENST00000311487 ECHDC2Q86YB7 292 aa19.8■□□□□ 0.76
HMGA1-201ENST00000311487 DACH1Q9UI36 760 aa19.8■□□□□ 0.76
HMGA1-201ENST00000311487 INPP5FQ9Y2H2 1132 aa19.8■□□□□ 0.76
HMGA1-201ENST00000311487 ADRB2P07550 413 aa19.79■□□□□ 0.76
HMGA1-201ENST00000311487 MCF2P10911 925 aa19.79■□□□□ 0.76
HMGA1-201ENST00000311487 MLLT1Q03111 559 aaPredicted RBP19.79■□□□□ 0.76
HMGA1-201ENST00000311487 SHHQ15465 462 aa19.79■□□□□ 0.76
HMGA1-201ENST00000311487 TPD52L1Q16890 204 aaPredicted RBP19.79■□□□□ 0.76
HMGA1-201ENST00000311487 GLRA4Q5JXX5 417 aa19.79■□□□□ 0.76
HMGA1-201ENST00000311487 POP1Q99575 1024 aaKnown RBP19.79■□□□□ 0.76
HMGA1-201ENST00000311487 GTPBP4Q9BZE4 634 aaKnown RBP19.79■□□□□ 0.76
HMGA1-201ENST00000311487 SAMSN1Q9NSI8 373 aaKnown RBP19.79■□□□□ 0.76
HMGA1-201ENST00000311487 OGTO15294 1046 aa19.78■□□□□ 0.76
HMGA1-201ENST00000311487 RECQL4O94761 1208 aa19.78■□□□□ 0.76
HMGA1-201ENST00000311487 GARTP22102 1010 aa19.78■□□□□ 0.76
HMGA1-201ENST00000311487 LMBRD2Q68DH5 695 aaPredicted RBP19.78■□□□□ 0.76
HMGA1-201ENST00000311487 AGMOQ6ZNB7 445 aa19.78■□□□□ 0.76
HMGA1-201ENST00000311487 GPD1LQ8N335 351 aa19.78■□□□□ 0.76
HMGA1-201ENST00000311487 XXYLT1Q8NBI6 393 aa19.78■□□□□ 0.76
HMGA1-201ENST00000311487 UBE2OQ9C0C9 1292 aaKnown RBP19.78■□□□□ 0.76
HMGA1-201ENST00000311487 PCDHB7Q9Y5E2 793 aa19.78■□□□□ 0.76
HMGA1-201ENST00000311487 BICDL2A1A5D9 508 aa19.78■□□□□ 0.76
HMGA1-201ENST00000311487 ITGA4P13612 1032 aa19.78■□□□□ 0.76
HMGA1-201ENST00000311487 MLH1P40692 756 aa19.78■□□□□ 0.76
HMGA1-201ENST00000311487 LRRC63Q05C16 580 aa19.78■□□□□ 0.76
HMGA1-201ENST00000311487 ENOX2Q16206 610 aaKnown RBP19.78■□□□□ 0.76
HMGA1-201ENST00000311487 SNRNP35Q16560 246 aaKnown RBP19.78■□□□□ 0.76
HMGA1-201ENST00000311487 DCAF4L1Q3SXM0 396 aa19.78■□□□□ 0.76
HMGA1-201ENST00000311487 LRRC55Q6ZSA7 311 aa19.78■□□□□ 0.76
HMGA1-201ENST00000311487 DHX40Q8IX18 779 aaKnown RBP19.78■□□□□ 0.76
HMGA1-201ENST00000311487 CCDC127Q96BQ5 260 aa19.78■□□□□ 0.76
HMGA1-201ENST00000311487 GAD1Q99259 594 aa19.78■□□□□ 0.76
HMGA1-201ENST00000311487 CBX8Q9HC52 389 aa19.78■□□□□ 0.76
HMGA1-201ENST00000311487 FANCLQ9NW38 375 aa19.78■□□□□ 0.76
HMGA1-201ENST00000311487 NFE2L3Q9Y4A8 694 aa19.78■□□□□ 0.76
HMGA1-201ENST00000311487 MICAL3Q7RTP6 2002 aa19.77■□□□□ 0.76
HMGA1-201ENST00000311487 ABHD14A-ACY1A0A1B0GW23 586 aa19.77■□□□□ 0.76
HMGA1-201ENST00000311487 PFKMP08237 780 aa19.77■□□□□ 0.76
HMGA1-201ENST00000311487 ACTN1P12814 892 aa19.77■□□□□ 0.76
HMGA1-201ENST00000311487 ERCC5P28715 1186 aaPredicted RBP19.77■□□□□ 0.76
HMGA1-201ENST00000311487 FKBP3Q00688 224 aaKnown RBP19.77■□□□□ 0.76
HMGA1-201ENST00000311487 PAN2Q504Q3 1202 aaKnown RBP19.77■□□□□ 0.76
HMGA1-201ENST00000311487 GOLGA5Q8TBA6 731 aa19.77■□□□□ 0.76
HMGA1-201ENST00000311487 HELQQ8TDG4 1101 aa19.77■□□□□ 0.76
HMGA1-201ENST00000311487 ACAP3Q96P50 834 aa19.77■□□□□ 0.76
HMGA1-201ENST00000311487 PDE11AQ9HCR9 933 aa19.77■□□□□ 0.76
HMGA1-201ENST00000311487 RRAGDQ9NQL2 400 aaPredicted RBP19.77■□□□□ 0.76
HMGA1-201ENST00000311487 DMAC2Q9NW81 257 aa19.77■□□□□ 0.76
HMGA1-201ENST00000311487 HCSTQ9UBK5 93 aa19.77■□□□□ 0.76
HMGA1-201ENST00000311487 CACNG4Q9UBN1 327 aa19.77■□□□□ 0.76
HMGA1-201ENST00000311487 LRFN2Q9ULH4 789 aa19.77■□□□□ 0.76
HMGA1-201ENST00000311487 GRXCR1A8MXD5 290 aa19.76■□□□□ 0.75
HMGA1-201ENST00000311487 EXTL3O43909 919 aa19.76■□□□□ 0.75
HMGA1-201ENST00000311487 KCNJ6P48051 423 aa19.76■□□□□ 0.75
HMGA1-201ENST00000311487 DLG4P78352 724 aa19.76■□□□□ 0.75
HMGA1-201ENST00000311487 EDRF1Q3B7T1 1238 aa19.76■□□□□ 0.75
HMGA1-201ENST00000311487 SLC10A6Q3KNW5 377 aa19.76■□□□□ 0.75
HMGA1-201ENST00000311487 FAM109BQ6ICB4 259 aaPredicted RBP19.76■□□□□ 0.75
HMGA1-201ENST00000311487 PSRC1Q6PGN9 363 aaPredicted RBP19.76■□□□□ 0.75
HMGA1-201ENST00000311487 NAT10Q9H0A0 1025 aaKnown RBP19.76■□□□□ 0.75
HMGA1-201ENST00000311487 MMRN2Q9H8L6 949 aa19.76■□□□□ 0.75
HMGA1-201ENST00000311487 RBAKQ9NYW8 714 aaPredicted RBP19.76■□□□□ 0.75
HMGA1-201ENST00000311487 CPSF3Q9UKF6 684 aaKnown RBP19.76■□□□□ 0.75
HMGA1-201ENST00000311487 PLAGL2Q9UPG8 496 aa19.76■□□□□ 0.75
HMGA1-201ENST00000311487 LACTBL1A8MY62 500 aa19.76■□□□□ 0.75
HMGA1-201ENST00000311487 CETN3O15182 167 aa19.76■□□□□ 0.75
HMGA1-201ENST00000311487 POMCP01189 267 aa19.76■□□□□ 0.75
HMGA1-201ENST00000311487 DLATP10515 647 aaKnown RBP19.76■□□□□ 0.75
HMGA1-201ENST00000311487 PPP1R2P41236 205 aa19.76■□□□□ 0.75
HMGA1-201ENST00000311487 GRM5P41594 1212 aa19.76■□□□□ 0.75
HMGA1-201ENST00000311487 FAM189BP81408 668 aa19.76■□□□□ 0.75
HMGA1-201ENST00000311487 CLLU1OSQ5K130 101 aa19.76■□□□□ 0.75
HMGA1-201ENST00000311487 SCARA3Q6AZY7 606 aa19.76■□□□□ 0.75
HMGA1-201ENST00000311487 ZNF598Q86UK7 904 aaKnown RBP19.76■□□□□ 0.75
HMGA1-201ENST00000311487 PLEKHO2Q8TD55 490 aa19.76■□□□□ 0.75
HMGA1-201ENST00000311487 RABGGTAQ92696 567 aa19.76■□□□□ 0.75
HMGA1-201ENST00000311487 CCDC51Q96ER9 411 aa19.76■□□□□ 0.75
HMGA1-201ENST00000311487 CCDC94Q9BW85 323 aaPredicted RBP19.76■□□□□ 0.75
HMGA1-201ENST00000311487 MIOSQ9NXC5 875 aa19.76■□□□□ 0.75
HMGA1-201ENST00000311487 FRMD4BQ9Y2L6 1034 aa19.76■□□□□ 0.75
HMGA1-201ENST00000311487 ARL5CA6NH57 179 aa19.75■□□□□ 0.75
HMGA1-201ENST00000311487 RPL13P26373 211 aaKnown RBP19.75■□□□□ 0.75
HMGA1-201ENST00000311487 NCAPHQ15003 741 aa19.75■□□□□ 0.75
HMGA1-201ENST00000311487 FAM200AQ8TCP9 573 aa19.75■□□□□ 0.75
HMGA1-201ENST00000311487 RNPC3Q96LT9 517 aaKnown RBP19.75■□□□□ 0.75
HMGA1-201ENST00000311487 GDF15Q99988 308 aa19.75■□□□□ 0.75
HMGA1-201ENST00000311487 RPF1Q9H9Y2 349 aaKnown RBP19.75■□□□□ 0.75
HMGA1-201ENST00000311487 TOPORSQ9NS56 1045 aaPredicted RBP19.75■□□□□ 0.75
HMGA1-201ENST00000311487 C1orf112Q9NSG2 853 aa19.75■□□□□ 0.75
HMGA1-201ENST00000311487 TTC3P53804 2025 aa19.75■□□□□ 0.75
HMGA1-201ENST00000311487 ZNF233A6NK53 670 aa19.74■□□□□ 0.75
HMGA1-201ENST00000311487 AMHP03971 560 aa19.74■□□□□ 0.75
HMGA1-201ENST00000311487 CLTAP09496 248 aa19.74■□□□□ 0.75
HMGA1-201ENST00000311487 RABGGTBP53611 331 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms