RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 ACO2Q99798 780 aaKnown RBP22.96■■□□□ 1.27
ATG4D-201ENST00000309469 IGF2BP3O00425 579 aaKnown RBP eCLIP22.96■■□□□ 1.27
ATG4D-201ENST00000309469 ASAP2O43150 1006 aa22.96■■□□□ 1.27
ATG4D-201ENST00000309469 ZC3H11AO75152 810 aaKnown RBP eCLIP22.96■■□□□ 1.27
ATG4D-201ENST00000309469 TOM1L1O75674 476 aa22.96■■□□□ 1.27
ATG4D-201ENST00000309469 C4BPAP04003 597 aaKnown RBP22.96■■□□□ 1.27
ATG4D-201ENST00000309469 SMPD1P17405 629 aa22.96■■□□□ 1.27
ATG4D-201ENST00000309469 USP8P40818 1118 aa22.96■■□□□ 1.27
ATG4D-201ENST00000309469 CKAP4Q07065 602 aaKnown RBP22.96■■□□□ 1.27
ATG4D-201ENST00000309469 ZACNQ401N2 412 aa22.96■■□□□ 1.27
ATG4D-201ENST00000309469 DUSP28Q4G0W2 176 aa22.96■■□□□ 1.27
ATG4D-201ENST00000309469 SHC3Q92529 594 aa22.96■■□□□ 1.27
ATG4D-201ENST00000309469 ZBTB10Q96DT7 871 aa22.96■■□□□ 1.27
ATG4D-201ENST00000309469 CAPZA3Q96KX2 299 aa22.96■■□□□ 1.27
ATG4D-201ENST00000309469 ARID3AQ99856 593 aa22.96■■□□□ 1.27
ATG4D-201ENST00000309469 SLC5A4Q9NY91 659 aa22.96■■□□□ 1.27
ATG4D-201ENST00000309469 HYOU1Q9Y4L1 999 aa22.96■■□□□ 1.27
ATG4D-201ENST00000309469 MANSC4A6NHS7 340 aaPredicted RBP22.95■■□□□ 1.26
ATG4D-201ENST00000309469 ZNF185O15231 689 aa22.95■■□□□ 1.26
ATG4D-201ENST00000309469 GJB1P08034 283 aa22.95■■□□□ 1.26
ATG4D-201ENST00000309469 ZSCAN20P17040 1043 aaPredicted RBP22.95■■□□□ 1.26
ATG4D-201ENST00000309469 CLCN3P51790 818 aa22.95■■□□□ 1.26
ATG4D-201ENST00000309469 IGBP1P78318 339 aa22.95■■□□□ 1.26
ATG4D-201ENST00000309469 IFI16Q16666 785 aaKnown RBP22.95■■□□□ 1.26
ATG4D-201ENST00000309469 LMBRD2Q68DH5 695 aaPredicted RBP22.95■■□□□ 1.26
ATG4D-201ENST00000309469 NLRP4Q96MN2 994 aa22.95■■□□□ 1.26
ATG4D-201ENST00000309469 MMS19Q96T76 1030 aa22.95■■□□□ 1.26
ATG4D-201ENST00000309469 C16orf70Q9BSU1 422 aa22.95■■□□□ 1.26
ATG4D-201ENST00000309469 TCHPQ9BT92 498 aa22.95■■□□□ 1.26
ATG4D-201ENST00000309469 TLR10Q9BXR5 811 aa22.95■■□□□ 1.26
ATG4D-201ENST00000309469 TSKSQ9UJT2 592 aa22.95■■□□□ 1.26
ATG4D-201ENST00000309469 NCK2O43639 380 aa22.94■■□□□ 1.26
ATG4D-201ENST00000309469 HARSP12081 509 aaKnown RBP22.94■■□□□ 1.26
ATG4D-201ENST00000309469 TCP1P17987 556 aaKnown RBP22.94■■□□□ 1.26
ATG4D-201ENST00000309469 GALCP54803 685 aa22.94■■□□□ 1.26
ATG4D-201ENST00000309469 IQSEC1Q6DN90 963 aa22.94■■□□□ 1.26
ATG4D-201ENST00000309469 MSL3Q8N5Y2 521 aaKnown RBP22.94■■□□□ 1.26
ATG4D-201ENST00000309469 SLC20A1Q8WUM9 679 aa22.94■■□□□ 1.26
ATG4D-201ENST00000309469 TATDN2Q93075 761 aa22.94■■□□□ 1.26
ATG4D-201ENST00000309469 FAM84AQ96KN4 292 aa22.94■■□□□ 1.26
ATG4D-201ENST00000309469 OSBPL9Q96SU4 736 aa22.94■■□□□ 1.26
ATG4D-201ENST00000309469 ZHX1Q9UKY1 873 aaPredicted RBP22.94■■□□□ 1.26
ATG4D-201ENST00000309469 CNTNAP2Q9UHC6 1331 aa22.94■■□□□ 1.26
ATG4D-201ENST00000309469 A0A0A6YYK5 440 aaPredicted RBP22.94■■□□□ 1.26
ATG4D-201ENST00000309469 GRID2IPA4D2P6 1211 aa22.94■■□□□ 1.26
ATG4D-201ENST00000309469 MAGEB2O15479 319 aa22.94■■□□□ 1.26
ATG4D-201ENST00000309469 ZNF286BP0CG31 522 aa22.94■■□□□ 1.26
ATG4D-201ENST00000309469 TDRD10Q5VZ19 366 aaKnown RBP22.94■■□□□ 1.26
ATG4D-201ENST00000309469 ZBTB33Q86T24 672 aa22.94■■□□□ 1.26
ATG4D-201ENST00000309469 PI4K2AQ9BTU6 479 aa22.94■■□□□ 1.26
ATG4D-201ENST00000309469 FZD8Q9H461 694 aa22.94■■□□□ 1.26
ATG4D-201ENST00000309469 ZCCHC17Q9NP64 241 aaKnown RBP22.94■■□□□ 1.26
ATG4D-201ENST00000309469 SEPT11Q9NVA2 429 aaKnown RBP22.94■■□□□ 1.26
ATG4D-201ENST00000309469 PTPRJQ12913 1337 aa22.93■■□□□ 1.26
ATG4D-201ENST00000309469 TMCO5BA8MYB1 307 aa22.93■■□□□ 1.26
ATG4D-201ENST00000309469 SGPL1O95470 568 aa22.93■■□□□ 1.26
ATG4D-201ENST00000309469 NOP2P46087 812 aaKnown RBP22.93■■□□□ 1.26
ATG4D-201ENST00000309469 PTENP60484 403 aa22.93■■□□□ 1.26
ATG4D-201ENST00000309469 SEZ6Q53EL9 994 aa22.93■■□□□ 1.26
ATG4D-201ENST00000309469 MORN1Q5T089 497 aa22.93■■□□□ 1.26
ATG4D-201ENST00000309469 NFRKBQ6P4R8 1299 aa22.93■■□□□ 1.26
ATG4D-201ENST00000309469 ENOSF1Q7L5Y1 443 aa22.93■■□□□ 1.26
ATG4D-201ENST00000309469 CREG2Q8IUH2 290 aa22.93■■□□□ 1.26
ATG4D-201ENST00000309469 ZNF668Q96K58 619 aaPredicted RBP22.93■■□□□ 1.26
ATG4D-201ENST00000309469 RPGRIP1Q96KN7 1286 aa22.93■■□□□ 1.26
ATG4D-201ENST00000309469 FAM81BQ96LP2 452 aa22.93■■□□□ 1.26
ATG4D-201ENST00000309469 CGRRF1Q99675 332 aa22.93■■□□□ 1.26
ATG4D-201ENST00000309469 ARGLU1Q9NWB6 273 aaPredicted RBP22.93■■□□□ 1.26
ATG4D-201ENST00000309469 ACKR2O00590 384 aa22.92■■□□□ 1.26
ATG4D-201ENST00000309469 CYP26A1O43174 497 aa22.92■■□□□ 1.26
ATG4D-201ENST00000309469 FAM189A1O60320 539 aa22.92■■□□□ 1.26
ATG4D-201ENST00000309469 GCNT1Q02742 428 aa22.92■■□□□ 1.26
ATG4D-201ENST00000309469 MCL1Q07820 350 aa22.92■■□□□ 1.26
ATG4D-201ENST00000309469 TAF1CQ15572 869 aaPredicted RBP22.92■■□□□ 1.26
ATG4D-201ENST00000309469 MEI1Q5TIA1 1274 aa22.92■■□□□ 1.26
ATG4D-201ENST00000309469 OR6J1Q8NGC5 347 aa22.92■■□□□ 1.26
ATG4D-201ENST00000309469 CAGE1Q8TC20 777 aa22.92■■□□□ 1.26
ATG4D-201ENST00000309469 COG1Q8WTW3 980 aa22.92■■□□□ 1.26
ATG4D-201ENST00000309469 ELMO3Q96BJ8 720 aa22.92■■□□□ 1.26
ATG4D-201ENST00000309469 PARD6BQ9BYG5 372 aa22.92■■□□□ 1.26
ATG4D-201ENST00000309469 COL1A2P08123 1366 aa22.92■■□□□ 1.26
ATG4D-201ENST00000309469 H3BRB1 525 aa22.92■■□□□ 1.26
ATG4D-201ENST00000309469 INO80B-WBP1J3KQ70 363 aa22.92■■□□□ 1.26
ATG4D-201ENST00000309469 ABLIM1O14639 778 aa22.92■■□□□ 1.26
ATG4D-201ENST00000309469 FTCDO95954 541 aa22.92■■□□□ 1.26
ATG4D-201ENST00000309469 HLA-DRAP01903 254 aa22.92■■□□□ 1.26
ATG4D-201ENST00000309469 TMEM253P0C7T8 217 aa22.92■■□□□ 1.26
ATG4D-201ENST00000309469 MAP2K5Q13163 448 aa22.92■■□□□ 1.26
ATG4D-201ENST00000309469 BIRC3Q13489 604 aa22.92■■□□□ 1.26
ATG4D-201ENST00000309469 WDR44Q5JSH3 913 aa22.92■■□□□ 1.26
ATG4D-201ENST00000309469 TSHZ1Q6ZSZ6 1077 aa22.92■■□□□ 1.26
ATG4D-201ENST00000309469 PALB2Q86YC2 1186 aa22.92■■□□□ 1.26
ATG4D-201ENST00000309469 BRSK2Q8IWQ3 736 aa22.92■■□□□ 1.26
ATG4D-201ENST00000309469 RPUSD2Q8IZ73 545 aaKnown RBP22.92■■□□□ 1.26
ATG4D-201ENST00000309469 LINC01465Q8N7H1 131 aa22.92■■□□□ 1.26
ATG4D-201ENST00000309469 EPS8L1Q8TE68 723 aa22.92■■□□□ 1.26
ATG4D-201ENST00000309469 INO80BQ9C086 356 aaPredicted RBP22.92■■□□□ 1.26
ATG4D-201ENST00000309469 TUT1Q9H6E5 874 aaKnown RBP22.92■■□□□ 1.26
ATG4D-201ENST00000309469 NOCTQ9UK39 431 aaKnown RBP22.92■■□□□ 1.26
ATG4D-201ENST00000309469 MYH10P35580 1976 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms