RNA–Protein interactions for RNA: ENST00000307548.2

SHANK2-AS3-201, SHANK2 antisense RNA 3, humanhuman

TSL 1 (best) BASIC

Gene SHANK2-AS3, Length 1,683 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3-201ENST00000307548 EPHB6O15197 1021 aa13.93□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 CLDN3O15551 220 aa13.93□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 CAPN2P17655 700 aa13.93□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 CETN1Q12798 172 aa13.93□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 NOLC1Q14978 699 aaKnown RBP eCLIP13.93□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 PSMD6Q15008 389 aa13.93□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 PTGISQ16647 500 aa13.93□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 AMHR2Q16671 573 aa13.93□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 TRIM71Q2Q1W2 868 aaKnown RBP13.93□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 KLHDC7AQ5VTJ3 777 aa13.93□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 CRELD2Q6UXH1 353 aaPredicted RBP13.93□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 CYP26C1Q6V0L0 522 aa13.93□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 SAAL1Q96ER3 474 aa13.93□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 FDXACB1Q9BRP7 624 aaPredicted RBP13.93□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 CRACR2AQ9BSW2 395 aa13.93□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 MSTO1Q9BUK6 570 aa13.93□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 LSM14BQ9BX40 385 aaKnown RBP13.93□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 MINDY3Q9H8M7 445 aa13.93□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 TRMT13Q9NUP7 481 aaKnown RBP13.93□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 COQ4Q9Y3A0 265 aa13.93□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 INO80B-WBP1J3KQ70 363 aa13.92□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 OGTO15294 1046 aa13.92□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 FAM189A1O60320 539 aa13.92□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 B4GALT4O60513 344 aa13.92□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 TRIM49P0CI25 452 aa13.92□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 TRIM49CP0CI26 452 aa13.92□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 SLC9A1P19634 815 aa13.92□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 NLRP11P59045 1033 aaKnown RBP13.92□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 DLG4P78352 724 aa13.92□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 PPP3CAQ08209 521 aa13.92□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 PTK7Q13308 1070 aa13.92□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 PRPF4BQ13523 1007 aaKnown RBP13.92□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 CBWD6Q4V339 395 aa13.92□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 CBWD3Q5JTY5 395 aa13.92□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 CBWD5Q5RIA9 395 aa13.92□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 ATF7IP2Q5U623 682 aa13.92□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 WDR59Q6PJI9 974 aa13.92□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 MPZL3Q6UWV2 235 aa13.92□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 EHBP1Q8NDI1 1231 aa13.92□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 LMO3Q8TAP4 145 aa13.92□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 DIS3LQ8TF46 1054 aaKnown RBP13.92□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 ZNF668Q96K58 619 aaPredicted RBP13.92□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 FAM213AQ9BRX8 229 aa13.92□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 INO80BQ9C086 356 aaPredicted RBP13.92□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 TRPV6Q9H1D0 765 aa13.92□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 CDHR5Q9HBB8 845 aa13.92□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 SIX2Q9NPC8 291 aa13.92□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 ZNHIT6Q9NWK9 470 aaKnown RBP13.92□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 CNTNAP2Q9UHC6 1331 aa13.92□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 CCDC85CA6NKD9 419 aa13.91□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 TTLL13PA6NNM8 815 aa13.91□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 CCP110O43303 1012 aa13.91□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 RPLP2P05387 115 aaKnown RBP13.91□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 IQCF3P0C7M6 154 aa13.91□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 MYL7Q01449 175 aa13.91□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 SNX17Q15036 470 aa13.91□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 KIZQ2M2Z5 673 aa13.91□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 E4F1Q66K89 784 aaPredicted RBP13.91□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 PDXDC1Q6P996 788 aa13.91□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 FAM126BQ8IXS8 530 aa13.91□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 TMEM8AQ9HCN3 771 aa13.91□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 RRAGDQ9NQL2 400 aaPredicted RBP13.91□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 GCNT4Q9P109 453 aa13.91□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 LRRIQ3A6PVS8 624 aaPredicted RBP13.91□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 CD4P01730 458 aa13.91□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 UCHL3P15374 230 aa13.91□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 RFX1P22670 979 aa13.91□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 CLCN1P35523 988 aa13.91□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 MGAT3Q09327 533 aa13.91□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 TMEM62Q0P6H9 643 aa13.91□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 SURF1Q15526 300 aa13.91□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 EPC2Q52LR7 807 aa13.91□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 C1orf53Q5VUE5 145 aa13.91□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 KRT39Q6A163 491 aa13.91□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 TRIM65Q6PJ69 517 aa13.91□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 SLC39A5Q6ZMH5 540 aa13.91□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 CACNA2D4Q7Z3S7 1137 aa13.91□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 CCAR2Q8N163 923 aaKnown RBP13.91□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 NLRP7Q8WX94 980 aa13.91□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 PPP1R16BQ96T49 567 aa13.91□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 GCOM2Q9BZD3 368 aaPredicted RBP13.91□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 SENP6Q9GZR1 1112 aaPredicted RBP13.91□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 TMEM117Q9H0C3 514 aa13.91□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 AIPL1Q9NZN9 384 aa13.91□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 KIAA0100Q14667 2235 aaKnown RBP13.91□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 DNAH12Q6ZR08 3092 aa13.9□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 MKI67P46013 3256 aaKnown RBP13.9□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 MCF2P10911 925 aa13.9□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 MXI1P50539 228 aa13.9□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 AP3M2P53677 418 aa13.9□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 POLR2FP61218 127 aaKnown RBP13.9□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 MRPS6P82932 125 aaKnown RBP13.9□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 KYAT1Q16773 422 aa13.9□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 C15orf39Q6ZRI6 1047 aa13.9□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 RRAGAQ7L523 313 aa13.9□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 ANKRD33Q7Z3H0 272 aa13.9□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 BRSK2Q8IWQ3 736 aa13.9□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 CCDC170Q8IYT3 715 aa13.9□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 TCHPQ9BT92 498 aa13.9□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 TMEM106CQ9BVX2 250 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms