RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 SOAT1P35610 550 aa13.35□□□□□ -0.27
USP38-201ENST00000307017 SULT1E1P49888 294 aa13.35□□□□□ -0.27
USP38-201ENST00000307017 EIF3EP60228 445 aaKnown RBP13.35□□□□□ -0.27
USP38-201ENST00000307017 PDAP1Q13442 181 aaKnown RBP13.35□□□□□ -0.27
USP38-201ENST00000307017 ZNF667Q5HYK9 610 aa13.35□□□□□ -0.27
USP38-201ENST00000307017 GABBR1Q9UBS5 961 aa13.35□□□□□ -0.27
USP38-201ENST00000307017 XPO7Q9UIA9 1087 aaKnown RBP13.35□□□□□ -0.27
USP38-201ENST00000307017 RASSF10A6NK89 507 aa13.35□□□□□ -0.27
USP38-201ENST00000307017 HIC1Q14526 733 aa13.35□□□□□ -0.27
USP38-201ENST00000307017 TAF5Q15542 800 aa13.35□□□□□ -0.27
USP38-201ENST00000307017 PID1Q7Z2X4 250 aa13.35□□□□□ -0.27
USP38-201ENST00000307017 SLC35G2Q8TBE7 412 aa13.35□□□□□ -0.27
USP38-201ENST00000307017 SGF29Q96ES7 293 aa13.35□□□□□ -0.27
USP38-201ENST00000307017 POLR3FQ9H1D9 316 aaPredicted RBP13.35□□□□□ -0.27
USP38-201ENST00000307017 CHCHD3Q9NX63 227 aaKnown RBP13.35□□□□□ -0.27
USP38-201ENST00000307017 SLC5A4Q9NY91 659 aa13.35□□□□□ -0.27
USP38-201ENST00000307017 CEP72Q9P209 647 aa13.35□□□□□ -0.27
USP38-201ENST00000307017 MLH3Q9UHC1 1453 aa13.35□□□□□ -0.27
USP38-201ENST00000307017 TSPOAP1O95153 1857 aa13.35□□□□□ -0.27
USP38-201ENST00000307017 ADRA2BP18089 450 aa13.35□□□□□ -0.27
USP38-201ENST00000307017 KIAA1755Q5JYT7 1200 aa13.35□□□□□ -0.27
USP38-201ENST00000307017 SNRNP48Q6IEG0 339 aaKnown RBP13.35□□□□□ -0.27
USP38-201ENST00000307017 DLGAP2Q9P1A6 1054 aa13.35□□□□□ -0.27
USP38-201ENST00000307017 CYTH3O43739 400 aa13.35□□□□□ -0.27
USP38-201ENST00000307017 C6orf10Q5SRN2 563 aa13.35□□□□□ -0.27
USP38-201ENST00000307017 PADI6Q6TGC4 694 aa13.35□□□□□ -0.27
USP38-201ENST00000307017 UBA3Q8TBC4 463 aa13.35□□□□□ -0.27
USP38-201ENST00000307017 CARD9Q9H257 536 aa13.35□□□□□ -0.27
USP38-201ENST00000307017 SERPINB13Q9UIV8 391 aa13.35□□□□□ -0.27
USP38-201ENST00000307017 ABCC10Q5T3U5 1492 aa13.35□□□□□ -0.27
USP38-201ENST00000307017 PNMA6FA0A0J9YX94 578 aa13.35□□□□□ -0.27
USP38-201ENST00000307017 PRPF3O43395 683 aaKnown RBP13.35□□□□□ -0.27
USP38-201ENST00000307017 PCCAP05165 728 aaPredicted RBP13.35□□□□□ -0.27
USP38-201ENST00000307017 PYGLP06737 847 aa13.35□□□□□ -0.27
USP38-201ENST00000307017 SERPINB5P36952 375 aa13.35□□□□□ -0.27
USP38-201ENST00000307017 ZSWIM2Q8NEG5 633 aa13.35□□□□□ -0.27
USP38-201ENST00000307017 MCEEQ96PE7 176 aa13.35□□□□□ -0.27
USP38-201ENST00000307017 APOL5Q9BWW9 433 aa13.35□□□□□ -0.27
USP38-201ENST00000307017 BRD8Q9H0E9 1235 aa13.35□□□□□ -0.27
USP38-201ENST00000307017 TMEM247A6NEH6 219 aa13.35□□□□□ -0.27
USP38-201ENST00000307017 ASMTLO95671 621 aa13.35□□□□□ -0.27
USP38-201ENST00000307017 PRAMEF18Q5VWM3 479 aa13.35□□□□□ -0.27
USP38-201ENST00000307017 VN1R5Q7Z5H4 357 aa13.35□□□□□ -0.27
USP38-201ENST00000307017 SLC44A2Q8IWA5 706 aaPredicted RBP13.35□□□□□ -0.27
USP38-201ENST00000307017 SSH2Q76I76 1423 aa13.35□□□□□ -0.27
USP38-201ENST00000307017 ATP8B3O60423 1300 aa13.34□□□□□ -0.27
USP38-201ENST00000307017 CTTNBP2Q8WZ74 1663 aa13.34□□□□□ -0.27
USP38-201ENST00000307017 TLR2O60603 784 aa13.34□□□□□ -0.27
USP38-201ENST00000307017 DLGAP3O95886 979 aa13.34□□□□□ -0.27
USP38-201ENST00000307017 SERPINB2P05120 415 aa13.34□□□□□ -0.27
USP38-201ENST00000307017 SERPINB3P29508 390 aa13.34□□□□□ -0.27
USP38-201ENST00000307017 RBM41Q96IZ5 413 aaKnown RBP13.34□□□□□ -0.27
USP38-201ENST00000307017 SH3GL3Q99963 347 aa13.34□□□□□ -0.27
USP38-201ENST00000307017 TRABDQ9H4I3 376 aa13.34□□□□□ -0.27
USP38-201ENST00000307017 PRR23D1E9PI22 279 aaPredicted RBP13.34□□□□□ -0.27
USP38-201ENST00000307017 PRR23D2P0DMB1 279 aaPredicted RBP13.34□□□□□ -0.27
USP38-201ENST00000307017 GRIK1P39086 918 aa13.34□□□□□ -0.27
USP38-201ENST00000307017 EIF3BP55884 814 aaKnown RBP13.34□□□□□ -0.27
USP38-201ENST00000307017 CCDC92Q53HC0 331 aaPredicted RBP13.34□□□□□ -0.27
USP38-201ENST00000307017 GALNT17Q6IS24 598 aa13.34□□□□□ -0.27
USP38-201ENST00000307017 SHC4Q6S5L8 630 aa13.34□□□□□ -0.27
USP38-201ENST00000307017 ADGRF4Q8IZF3 695 aa13.34□□□□□ -0.27
USP38-201ENST00000307017 FAM162AQ96A26 154 aa13.34□□□□□ -0.27
USP38-201ENST00000307017 CEP95Q96GE4 821 aa13.34□□□□□ -0.27
USP38-201ENST00000307017 SENP1Q9P0U3 644 aa13.34□□□□□ -0.27
USP38-201ENST00000307017 TRIM33Q9UPN9 1127 aa13.34□□□□□ -0.27
USP38-201ENST00000307017 AP3B1O00203 1094 aa13.34□□□□□ -0.27
USP38-201ENST00000307017 PTPN12Q05209 780 aaKnown RBP13.34□□□□□ -0.27
USP38-201ENST00000307017 PLEKHM3Q6ZWE6 761 aa13.34□□□□□ -0.27
USP38-201ENST00000307017 ANO5Q75V66 913 aa13.34□□□□□ -0.27
USP38-201ENST00000307017 SPATA21Q7Z572 469 aa13.34□□□□□ -0.27
USP38-201ENST00000307017 ASIC4Q96FT7 647 aa13.34□□□□□ -0.27
USP38-201ENST00000307017 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.34□□□□□ -0.271e-9■■■■■ 46.5
USP38-201ENST00000307017 TUBB6Q9BUF5 446 aa13.34□□□□□ -0.27
USP38-201ENST00000307017 UTYO14607 1347 aa13.34□□□□□ -0.27
USP38-201ENST00000307017 ARHGEF10O15013 1369 aa13.34□□□□□ -0.27
USP38-201ENST00000307017 LGALS16A8MUM7 142 aa13.34□□□□□ -0.27
USP38-201ENST00000307017 SUPT3HB4E1H0 165 aa13.34□□□□□ -0.27
USP38-201ENST00000307017 FKBP9O95302 570 aa13.34□□□□□ -0.27
USP38-201ENST00000307017 PTK2BQ14289 1009 aa13.34□□□□□ -0.27
USP38-201ENST00000307017 SEPT2Q15019 361 aa13.34□□□□□ -0.27
USP38-201ENST00000307017 FKBP9P1Q75LS8 142 aa13.34□□□□□ -0.27
USP38-201ENST00000307017 SEMA4DQ92854 862 aa13.34□□□□□ -0.27
USP38-201ENST00000307017 SEC16BQ96JE7 1060 aa13.34□□□□□ -0.27
USP38-201ENST00000307017 AK8Q96MA6 479 aa13.34□□□□□ -0.27
USP38-201ENST00000307017 NFIBO00712 420 aa13.34□□□□□ -0.27
USP38-201ENST00000307017 CYP2E1P05181 493 aaPredicted RBP13.34□□□□□ -0.27
USP38-201ENST00000307017 UBE3CQ15386 1083 aa13.34□□□□□ -0.27
USP38-201ENST00000307017 TSC22D1Q15714 1073 aa13.34□□□□□ -0.27
USP38-201ENST00000307017 RASGRP2Q7LDG7 609 aa13.34□□□□□ -0.27
USP38-201ENST00000307017 RBM12Q9NTZ6 932 aaKnown RBP13.34□□□□□ -0.27
USP38-201ENST00000307017 XDHP47989 1333 aa13.34□□□□□ -0.27
USP38-201ENST00000307017 MYO3BQ8WXR4 1341 aa13.34□□□□□ -0.27
USP38-201ENST00000307017 IGF2BP3O00425 579 aaKnown RBP eCLIP13.33□□□□□ -0.27
USP38-201ENST00000307017 PDHBP11177 359 aa13.33□□□□□ -0.27
USP38-201ENST00000307017 ALFQ53S48 1182 aa13.33□□□□□ -0.27
USP38-201ENST00000307017 ERP27Q96DN0 273 aa13.33□□□□□ -0.27
USP38-201ENST00000307017 RMDN3Q96TC7 470 aa13.33□□□□□ -0.27
USP38-201ENST00000307017 HPCAL4Q9UM19 191 aa13.33□□□□□ -0.27
USP38-201ENST00000307017 GTF2A1LQ9UNN4 478 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms