RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 ZFATQ9P243 1243 aa14.1□□□□□ -0.15
TRIM56-201ENST00000306085 UVRAGQ9P2Y5 699 aa14.1□□□□□ -0.15
TRIM56-201ENST00000306085 SMIM31A0A1B0GVY4 71 aa14.1□□□□□ -0.15
TRIM56-201ENST00000306085 USP1O94782 785 aa14.1□□□□□ -0.15
TRIM56-201ENST00000306085 RCN1Q15293 331 aa14.1□□□□□ -0.15
TRIM56-201ENST00000306085 DLGAP2Q9P1A6 1054 aa14.1□□□□□ -0.15
TRIM56-201ENST00000306085 RWDD3Q9Y3V2 267 aa14.1□□□□□ -0.15
TRIM56-201ENST00000306085 E2F8A0AVK6 867 aa14.1□□□□□ -0.15
TRIM56-201ENST00000306085 RNMTO43148 476 aaKnown RBP14.1□□□□□ -0.15
TRIM56-201ENST00000306085 AKT1P31749 480 aa14.1□□□□□ -0.15
TRIM56-201ENST00000306085 SLC27A3Q5K4L6 730 aa14.1□□□□□ -0.15
TRIM56-201ENST00000306085 PKP3Q9Y446 797 aa14.1□□□□□ -0.15
TRIM56-201ENST00000306085 ADGRF5Q8IZF2 1346 aa14.1□□□□□ -0.15
TRIM56-201ENST00000306085 SRP72O76094 671 aaKnown RBP14.1□□□□□ -0.15
TRIM56-201ENST00000306085 GTF2H3Q13889 308 aa14.1□□□□□ -0.15
TRIM56-201ENST00000306085 RSPH1Q8WYR4 309 aa14.1□□□□□ -0.15
TRIM56-201ENST00000306085 ELMO2Q96JJ3 720 aa14.1□□□□□ -0.15
TRIM56-201ENST00000306085 ACAP3Q96P50 834 aa14.1□□□□□ -0.15
TRIM56-201ENST00000306085 TRPM2O94759 1503 aa14.1□□□□□ -0.15
TRIM56-201ENST00000306085 SMAPO00193 183 aa14.1□□□□□ -0.15
TRIM56-201ENST00000306085 IL6P05231 212 aa14.1□□□□□ -0.15
TRIM56-201ENST00000306085 NLRP11P59045 1033 aaKnown RBP14.1□□□□□ -0.15
TRIM56-201ENST00000306085 PLEKHA7Q6IQ23 1121 aa14.1□□□□□ -0.15
TRIM56-201ENST00000306085 PCSK1NQ9UHG2 260 aa14.1□□□□□ -0.15
TRIM56-201ENST00000306085 DARSP14868 501 aaKnown RBP14.1□□□□□ -0.15
TRIM56-201ENST00000306085 YWHABP31946 246 aaKnown RBP14.1□□□□□ -0.15
TRIM56-201ENST00000306085 CCNA1P78396 465 aa14.1□□□□□ -0.15
TRIM56-201ENST00000306085 NCAPHQ15003 741 aa14.1□□□□□ -0.15
TRIM56-201ENST00000306085 BTN2A1Q7KYR7 527 aa14.1□□□□□ -0.15
TRIM56-201ENST00000306085 PCDHA4Q9UN74 947 aa14.1□□□□□ -0.15
TRIM56-201ENST00000306085 GOLGA8TH3BQL2 631 aa14.1□□□□□ -0.15
TRIM56-201ENST00000306085 EPN3Q9H201 632 aa14.1□□□□□ -0.15
TRIM56-201ENST00000306085 ADAM30Q9UKF2 790 aa14.1□□□□□ -0.15
TRIM56-201ENST00000306085 FAM25AB3EWG3 89 aa14.09□□□□□ -0.15
TRIM56-201ENST00000306085 FAM25CB3EWG5 89 aa14.09□□□□□ -0.15
TRIM56-201ENST00000306085 FAM25GB3EWG6 89 aa14.09□□□□□ -0.15
TRIM56-201ENST00000306085 CLASP2O75122 1294 aaKnown RBP14.09□□□□□ -0.15
TRIM56-201ENST00000306085 CCT3P49368 545 aaKnown RBP14.09□□□□□ -0.15
TRIM56-201ENST00000306085 ZNF235Q14590 738 aa14.09□□□□□ -0.15
TRIM56-201ENST00000306085 MIER2Q8N344 545 aa14.09□□□□□ -0.15
TRIM56-201ENST00000306085 PCDHGA3Q9Y5H0 932 aa14.09□□□□□ -0.15
TRIM56-201ENST00000306085 ASMTLO95671 621 aa14.09□□□□□ -0.15
TRIM56-201ENST00000306085 SURF1Q15526 300 aa14.09□□□□□ -0.15
TRIM56-201ENST00000306085 TRIQKQ629K1 86 aa14.09□□□□□ -0.15
TRIM56-201ENST00000306085 IZUMO1Q8IYV9 350 aa14.09□□□□□ -0.15
TRIM56-201ENST00000306085 ADD3Q9UEY8 706 aaKnown RBP14.09□□□□□ -0.15
TRIM56-201ENST00000306085 ASNA1O43681 348 aa14.09□□□□□ -0.15
TRIM56-201ENST00000306085 NCKAP1LP55160 1127 aa14.09□□□□□ -0.15
TRIM56-201ENST00000306085 WLSQ5T9L3 541 aa14.09□□□□□ -0.15
TRIM56-201ENST00000306085 THAP9Q9H5L6 903 aa14.09□□□□□ -0.15
TRIM56-201ENST00000306085 DOLKQ9UPQ8 538 aa14.09□□□□□ -0.15
TRIM56-201ENST00000306085 CCDC188H7C350 402 aa14.09□□□□□ -0.15
TRIM56-201ENST00000306085 ALDH1B1P30837 517 aa14.09□□□□□ -0.15
TRIM56-201ENST00000306085 PODNQ7Z5L7 613 aa14.09□□□□□ -0.15
TRIM56-201ENST00000306085 TTC13Q8NBP0 860 aa14.09□□□□□ -0.15
TRIM56-201ENST00000306085 MCRS1Q96EZ8 462 aa14.09□□□□□ -0.15
TRIM56-201ENST00000306085 MYH11P35749 1972 aa14.09□□□□□ -0.15
TRIM56-201ENST00000306085 KDM5AP29375 1690 aaKnown RBP14.09□□□□□ -0.15
TRIM56-201ENST00000306085 PLCG1P19174 1290 aa14.09□□□□□ -0.15
TRIM56-201ENST00000306085 LRRC24Q50LG9 513 aa14.09□□□□□ -0.15
TRIM56-201ENST00000306085 COMMD2Q86X83 199 aa14.09□□□□□ -0.15
TRIM56-201ENST00000306085 SPON2Q9BUD6 331 aa14.09□□□□□ -0.15
TRIM56-201ENST00000306085 CD274Q9NZQ7 290 aa14.09□□□□□ -0.15
TRIM56-201ENST00000306085 ZBED6P86452 979 aa14.09□□□□□ -0.15
TRIM56-201ENST00000306085 PCYOX1LQ8NBM8 494 aa14.09□□□□□ -0.15
TRIM56-201ENST00000306085 AK8Q96MA6 479 aa14.09□□□□□ -0.15
TRIM56-201ENST00000306085 SPATA16Q9BXB7 569 aa14.09□□□□□ -0.15
TRIM56-201ENST00000306085 AP4S1Q9Y587 144 aa14.09□□□□□ -0.15
TRIM56-201ENST00000306085 ZNF839A8K0R7 811 aa14.09□□□□□ -0.15
TRIM56-201ENST00000306085 IL12RB1P42701 662 aa14.09□□□□□ -0.15
TRIM56-201ENST00000306085 TMEM270Q6UE05 265 aa14.09□□□□□ -0.15
TRIM56-201ENST00000306085 WNK4Q96J92 1243 aa14.09□□□□□ -0.15
TRIM56-201ENST00000306085 TUFT1Q9NNX1 390 aa14.09□□□□□ -0.15
TRIM56-201ENST00000306085 PNMA8BQ9ULN7 279 aaPredicted RBP14.09□□□□□ -0.15
TRIM56-201ENST00000306085 SFI1A8K8P3 1242 aa14.09□□□□□ -0.15
TRIM56-201ENST00000306085 PSAPP07602 524 aa14.09□□□□□ -0.15
TRIM56-201ENST00000306085 CTTNQ14247 550 aaKnown RBP14.09□□□□□ -0.15
TRIM56-201ENST00000306085 ARMC3Q5W041 872 aa14.09□□□□□ -0.15
TRIM56-201ENST00000306085 GPR162Q16538 588 aa14.08□□□□□ -0.15
TRIM56-201ENST00000306085 ZNF618Q5T7W0 954 aa14.08□□□□□ -0.15
TRIM56-201ENST00000306085 ZBTB10Q96DT7 871 aa14.08□□□□□ -0.15
TRIM56-201ENST00000306085 ATP6V1G3Q96LB4 118 aa14.08□□□□□ -0.15
TRIM56-201ENST00000306085 SIK2Q9H0K1 926 aa14.08□□□□□ -0.15
TRIM56-201ENST00000306085 PFKFB2O60825 505 aa14.08□□□□□ -0.15
TRIM56-201ENST00000306085 ITSN2Q9NZM3 1697 aa14.08□□□□□ -0.15
TRIM56-201ENST00000306085 ESYT3A0FGR9 886 aa14.08□□□□□ -0.16
TRIM56-201ENST00000306085 ARF4P18085 180 aaPredicted RBP14.08□□□□□ -0.16
TRIM56-201ENST00000306085 PHKA1P46020 1223 aa14.08□□□□□ -0.16
TRIM56-201ENST00000306085 SCRN1Q12765 414 aa14.08□□□□□ -0.16
TRIM56-201ENST00000306085 TRADDQ15628 312 aa14.08□□□□□ -0.16
TRIM56-201ENST00000306085 DGKKQ5KSL6 1271 aa14.08□□□□□ -0.16
TRIM56-201ENST00000306085 ALKBH5Q6P6C2 394 aaKnown RBP14.08□□□□□ -0.16
TRIM56-201ENST00000306085 DNAJC9Q8WXX5 260 aa14.08□□□□□ -0.16
TRIM56-201ENST00000306085 AMNQ9BXJ7 453 aa14.08□□□□□ -0.16
TRIM56-201ENST00000306085 SAMSN1Q9NSI8 373 aaKnown RBP14.08□□□□□ -0.16
TRIM56-201ENST00000306085 ADAMTS1Q9UHI8 967 aa14.08□□□□□ -0.16
TRIM56-201ENST00000306085 DENND3A2RUS2 1198 aa14.08□□□□□ -0.16
TRIM56-201ENST00000306085 GFPT1Q06210 699 aaPredicted RBP14.08□□□□□ -0.16
TRIM56-201ENST00000306085 PRPF39Q86UA1 669 aaKnown RBP14.08□□□□□ -0.16
TRIM56-201ENST00000306085 CAAP1Q9H8G2 361 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms