RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 CCAR2Q8N163 923 aaKnown RBP14.09□□□□□ -0.15
CCDC7-202ENST00000302316 CPB2Q96IY4 423 aa14.09□□□□□ -0.15
CCDC7-202ENST00000302316 CHP1Q99653 195 aa14.09□□□□□ -0.15
CCDC7-202ENST00000302316 NUCKS1Q9H1E3 243 aaKnown RBP14.09□□□□□ -0.15
CCDC7-202ENST00000302316 CDT1Q9H211 546 aa14.09□□□□□ -0.15
CCDC7-202ENST00000302316 HMX1Q9NP08 348 aaPredicted RBP14.09□□□□□ -0.15
CCDC7-202ENST00000302316 TRMT1Q9NXH9 659 aaKnown RBP14.09□□□□□ -0.15
CCDC7-202ENST00000302316 PLAGL2Q9UPG8 496 aa14.09□□□□□ -0.15
CCDC7-202ENST00000302316 USP27XA6NNY8 438 aa14.08□□□□□ -0.16
CCDC7-202ENST00000302316 TSPAN1O60635 241 aa14.08□□□□□ -0.16
CCDC7-202ENST00000302316 ARF4P18085 180 aaPredicted RBP14.08□□□□□ -0.16
CCDC7-202ENST00000302316 TNNI1P19237 187 aa14.08□□□□□ -0.16
CCDC7-202ENST00000302316 HNRNPH3P31942 346 aaKnown RBP14.08□□□□□ -0.16
CCDC7-202ENST00000302316 TNFSF9P41273 254 aa14.08□□□□□ -0.16
CCDC7-202ENST00000302316 WNT7BP56706 349 aa14.08□□□□□ -0.16
CCDC7-202ENST00000302316 RAPGEF1Q13905 1077 aa14.08□□□□□ -0.16
CCDC7-202ENST00000302316 EPC2Q52LR7 807 aa14.08□□□□□ -0.16
CCDC7-202ENST00000302316 CCSAPQ6IQ19 270 aaPredicted RBP14.08□□□□□ -0.16
CCDC7-202ENST00000302316 TAF2Q6P1X5 1199 aa14.08□□□□□ -0.16
CCDC7-202ENST00000302316 EHBP1Q8NDI1 1231 aa14.08□□□□□ -0.16
CCDC7-202ENST00000302316 SPAG5Q96R06 1193 aa14.08□□□□□ -0.16
CCDC7-202ENST00000302316 DESI2Q9BSY9 194 aa14.08□□□□□ -0.16
CCDC7-202ENST00000302316 PDZD7Q9H5P4 517 aa14.08□□□□□ -0.16
CCDC7-202ENST00000302316 PDE11AQ9HCR9 933 aa14.08□□□□□ -0.16
CCDC7-202ENST00000302316 APEX2Q9UBZ4 518 aa14.08□□□□□ -0.16
CCDC7-202ENST00000302316 FBXL5Q9UKA1 691 aa14.08□□□□□ -0.16
CCDC7-202ENST00000302316 PMM2O15305 246 aa14.08□□□□□ -0.16
CCDC7-202ENST00000302316 FGFR4P22455 802 aa14.08□□□□□ -0.16
CCDC7-202ENST00000302316 SFMBT2Q5VUG0 894 aa14.08□□□□□ -0.16
CCDC7-202ENST00000302316 LMBRD2Q68DH5 695 aaPredicted RBP14.08□□□□□ -0.16
CCDC7-202ENST00000302316 GDF6Q6KF10 455 aaPredicted RBP14.08□□□□□ -0.16
CCDC7-202ENST00000302316 GJB7Q6PEY0 223 aa14.08□□□□□ -0.16
CCDC7-202ENST00000302316 GPIHBP1Q8IV16 184 aa14.08□□□□□ -0.16
CCDC7-202ENST00000302316 THNSL1Q8IYQ7 743 aa14.08□□□□□ -0.16
CCDC7-202ENST00000302316 CDHR5Q9HBB8 845 aa14.08□□□□□ -0.16
CCDC7-202ENST00000302316 CCP110O43303 1012 aa14.07□□□□□ -0.16
CCDC7-202ENST00000302316 CLDN10P78369 228 aa14.07□□□□□ -0.16
CCDC7-202ENST00000302316 IQCEQ6IPM2 695 aa14.07□□□□□ -0.16
CCDC7-202ENST00000302316 SV2AQ7L0J3 742 aa14.07□□□□□ -0.16
CCDC7-202ENST00000302316 CATSPER4Q7RTX7 472 aa14.07□□□□□ -0.16
CCDC7-202ENST00000302316 NME8Q8N427 588 aa14.07□□□□□ -0.16
CCDC7-202ENST00000302316 CEP120Q8N960 986 aa14.07□□□□□ -0.16
CCDC7-202ENST00000302316 LMO3Q8TAP4 145 aa14.07□□□□□ -0.16
CCDC7-202ENST00000302316 CGRRF1Q99675 332 aa14.07□□□□□ -0.16
CCDC7-202ENST00000302316 KCND1Q9NSA2 647 aa14.07□□□□□ -0.16
CCDC7-202ENST00000302316 AJAP1Q9UKB5 411 aaPredicted RBP14.07□□□□□ -0.16
CCDC7-202ENST00000302316 CPSF3Q9UKF6 684 aaKnown RBP14.07□□□□□ -0.16
CCDC7-202ENST00000302316 TRIP12Q14669 1992 aaPredicted RBP14.07□□□□□ -0.16
CCDC7-202ENST00000302316 MCF2P10911 925 aa14.06□□□□□ -0.16
CCDC7-202ENST00000302316 DARSP14868 501 aaKnown RBP14.06□□□□□ -0.16
CCDC7-202ENST00000302316 HSPA6P17066 643 aa14.06□□□□□ -0.16
CCDC7-202ENST00000302316 CLCN1P35523 988 aa14.06□□□□□ -0.16
CCDC7-202ENST00000302316 OSTNP61366 133 aa14.06□□□□□ -0.16
CCDC7-202ENST00000302316 CDK17Q00537 523 aa14.06□□□□□ -0.16
CCDC7-202ENST00000302316 FBXL13Q8NEE6 735 aa14.06□□□□□ -0.16
CCDC7-202ENST00000302316 SH3TC2Q8TF17 1288 aa14.06□□□□□ -0.16
CCDC7-202ENST00000302316 SYN2Q92777 582 aaPredicted RBP14.06□□□□□ -0.16
CCDC7-202ENST00000302316 VTI1AQ96AJ9 217 aa14.06□□□□□ -0.16
CCDC7-202ENST00000302316 FAM212AQ96EL1 285 aa14.06□□□□□ -0.16
CCDC7-202ENST00000302316 FAM84AQ96KN4 292 aa14.06□□□□□ -0.16
CCDC7-202ENST00000302316 PPP1R13BQ96KQ4 1090 aa14.06□□□□□ -0.16
CCDC7-202ENST00000302316 ADPGKQ9BRR6 497 aa14.06□□□□□ -0.16
CCDC7-202ENST00000302316 PPP2R2CQ9Y2T4 447 aa14.06□□□□□ -0.16
CCDC7-202ENST00000302316 DAAM1Q9Y4D1 1078 aa14.06□□□□□ -0.16
CCDC7-202ENST00000302316 PTPRJQ12913 1337 aa14.06□□□□□ -0.16
CCDC7-202ENST00000302316 ZSCAN12O43309 604 aa14.06□□□□□ -0.16
CCDC7-202ENST00000302316 RFX1P22670 979 aa14.06□□□□□ -0.16
CCDC7-202ENST00000302316 EIF4BP23588 611 aaKnown RBP14.06□□□□□ -0.16
CCDC7-202ENST00000302316 NCBP1Q09161 790 aaKnown RBP14.06□□□□□ -0.16
CCDC7-202ENST00000302316 ASIC2Q16515 512 aa14.06□□□□□ -0.16
CCDC7-202ENST00000302316 TDRD12Q587J7 1177 aaKnown RBP14.06□□□□□ -0.16
CCDC7-202ENST00000302316 SESTD1Q86VW0 696 aa14.06□□□□□ -0.16
CCDC7-202ENST00000302316 ZNF710Q8N1W2 664 aa14.06□□□□□ -0.16
CCDC7-202ENST00000302316 TAS1R2Q8TE23 839 aa14.06□□□□□ -0.16
CCDC7-202ENST00000302316 NHEJ1Q9H9Q4 299 aaPredicted RBP14.06□□□□□ -0.16
CCDC7-202ENST00000302316 DNAJC12Q9UKB3 198 aa14.06□□□□□ -0.16
CCDC7-202ENST00000302316 MYO6Q9UM54 1294 aa14.06□□□□□ -0.16
CCDC7-202ENST00000302316 COQ4Q9Y3A0 265 aa14.06□□□□□ -0.16
CCDC7-202ENST00000302316 M0QZ92 97 aa14.05□□□□□ -0.16
CCDC7-202ENST00000302316 LRRN2O75325 713 aa14.05□□□□□ -0.16
CCDC7-202ENST00000302316 CABYRO75952 493 aa14.05□□□□□ -0.16
CCDC7-202ENST00000302316 CCDC175P0C221 793 aa14.05□□□□□ -0.16
CCDC7-202ENST00000302316 CYLC1P35663 651 aaPredicted RBP14.05□□□□□ -0.16
CCDC7-202ENST00000302316 ACLYP53396 1101 aa14.05□□□□□ -0.16
CCDC7-202ENST00000302316 CRYBB1P53674 252 aaPredicted RBP14.05□□□□□ -0.16
CCDC7-202ENST00000302316 JAM2P57087 298 aa14.05□□□□□ -0.16
CCDC7-202ENST00000302316 ARID5AQ03989 594 aa14.05□□□□□ -0.16
CCDC7-202ENST00000302316 BIRC3Q13489 604 aa14.05□□□□□ -0.16
CCDC7-202ENST00000302316 SNX17Q15036 470 aa14.05□□□□□ -0.16
CCDC7-202ENST00000302316 PCBP1Q15365 356 aaKnown RBP eCLIP14.05□□□□□ -0.16
CCDC7-202ENST00000302316 LHX8Q68G74 356 aa14.05□□□□□ -0.16
CCDC7-202ENST00000302316 RSPH3Q86UC2 560 aa14.05□□□□□ -0.16
CCDC7-202ENST00000302316 ZNF516Q92618 1163 aa14.05□□□□□ -0.16
CCDC7-202ENST00000302316 SEMA4DQ92854 862 aa14.05□□□□□ -0.16
CCDC7-202ENST00000302316 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.05□□□□□ -0.16
CCDC7-202ENST00000302316 RAB20Q9NX57 234 aa14.05□□□□□ -0.16
CCDC7-202ENST00000302316 ARHGAP20Q9P2F6 1191 aa14.05□□□□□ -0.16
CCDC7-202ENST00000302316 ADGRG1Q9Y653 693 aa14.05□□□□□ -0.16
CCDC7-202ENST00000302316 A0A1B0GUA9 196 aa14.05□□□□□ -0.16
CCDC7-202ENST00000302316 MOXD2PA6NHM9 499 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms