RNA–Protein interactions for RNA: ENST00000302251.9

PDGFD-201, Transcript of platelet derived growth factor D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDGFD, Length 4,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-201ENST00000302251 PCDHGC5Q9Y5F6 944 aa12.91□□□□□ -0.34
PDGFD-201ENST00000302251 F5H423 210 aaPredicted RBP12.91□□□□□ -0.34
PDGFD-201ENST00000302251 AP1G2O75843 785 aa12.91□□□□□ -0.34
PDGFD-201ENST00000302251 PIAS1O75925 651 aa12.91□□□□□ -0.34
PDGFD-201ENST00000302251 TAL1P17542 331 aaPredicted RBP12.91□□□□□ -0.34
PDGFD-201ENST00000302251 PDE1BQ01064 536 aa12.91□□□□□ -0.34
PDGFD-201ENST00000302251 RNASELQ05823 741 aaKnown RBP12.91□□□□□ -0.34
PDGFD-201ENST00000302251 ITPK1Q13572 414 aa12.91□□□□□ -0.34
PDGFD-201ENST00000302251 RCSD1Q6JBY9 416 aa12.91□□□□□ -0.34
PDGFD-201ENST00000302251 TRMT10CQ7L0Y3 403 aaKnown RBP12.91□□□□□ -0.34
PDGFD-201ENST00000302251 NT5DC3Q86UY8 548 aa12.91□□□□□ -0.34
PDGFD-201ENST00000302251 COL23A1Q86Y22 540 aaPredicted RBP12.91□□□□□ -0.34
PDGFD-201ENST00000302251 SLC13A5Q86YT5 568 aaPredicted RBP12.91□□□□□ -0.34
PDGFD-201ENST00000302251 JMJD4Q9H9V9 463 aa12.91□□□□□ -0.34
PDGFD-201ENST00000302251 ACP6Q9NPH0 428 aa12.91□□□□□ -0.34
PDGFD-201ENST00000302251 KMT5AQ9NQR1 393 aa12.91□□□□□ -0.34
PDGFD-201ENST00000302251 ZFATQ9P243 1243 aa12.91□□□□□ -0.34
PDGFD-201ENST00000302251 PCSK1NQ9UHG2 260 aa12.91□□□□□ -0.34
PDGFD-201ENST00000302251 CBX6O95503 412 aa12.91□□□□□ -0.34
PDGFD-201ENST00000302251 TMEM270Q6UE05 265 aa12.91□□□□□ -0.34
PDGFD-201ENST00000302251 PPM1NQ8N819 430 aa12.91□□□□□ -0.34
PDGFD-201ENST00000302251 ATL2Q8NHH9 583 aa12.91□□□□□ -0.34
PDGFD-201ENST00000302251 SLC26A7Q8TE54 656 aa12.91□□□□□ -0.34
PDGFD-201ENST00000302251 ACSF2Q96CM8 615 aaPredicted RBP12.91□□□□□ -0.34
PDGFD-201ENST00000302251 ARHGEF26Q96DR7 871 aa12.91□□□□□ -0.34
PDGFD-201ENST00000302251 RUSC1Q9BVN2 902 aa12.91□□□□□ -0.34
PDGFD-201ENST00000302251 FAF1Q9UNN5 650 aaPredicted RBP12.91□□□□□ -0.34
PDGFD-201ENST00000302251 TTLL3Q9Y4R7 772 aa12.91□□□□□ -0.34
PDGFD-201ENST00000302251 YY1P25490 414 aa12.9□□□□□ -0.34
PDGFD-201ENST00000302251 NOP14P78316 857 aaKnown RBP12.9□□□□□ -0.34
PDGFD-201ENST00000302251 ITIH4Q14624 930 aa12.9□□□□□ -0.34
PDGFD-201ENST00000302251 COG2Q14746 738 aa12.9□□□□□ -0.34
PDGFD-201ENST00000302251 RCN1Q15293 331 aa12.9□□□□□ -0.34
PDGFD-201ENST00000302251 ERMARDQ5T6L9 678 aa12.9□□□□□ -0.34
PDGFD-201ENST00000302251 RGS9BPQ6ZS82 235 aa12.9□□□□□ -0.34
PDGFD-201ENST00000302251 NLRX1Q86UT6 975 aa12.9□□□□□ -0.34
PDGFD-201ENST00000302251 PWWP2AQ96N64 755 aa12.9□□□□□ -0.34
PDGFD-201ENST00000302251 SHCBP1LQ9BZQ2 653 aa12.9□□□□□ -0.34
PDGFD-201ENST00000302251 PAPOLBQ9NRJ5 636 aaKnown RBP12.9□□□□□ -0.34
PDGFD-201ENST00000302251 AIPL1Q9NZN9 384 aa12.9□□□□□ -0.34
PDGFD-201ENST00000302251 NXF1Q9UBU9 619 aaKnown RBP12.9□□□□□ -0.34
PDGFD-201ENST00000302251 PHTF1Q9UMS5 762 aa12.9□□□□□ -0.34
PDGFD-201ENST00000302251 A0A1B0GUL6 1792 aa12.9□□□□□ -0.34
PDGFD-201ENST00000302251 CLRN2A0PK11 232 aa12.9□□□□□ -0.34
PDGFD-201ENST00000302251 TLR3O15455 904 aaKnown RBP12.9□□□□□ -0.34
PDGFD-201ENST00000302251 PPFIA2O75334 1257 aa12.9□□□□□ -0.34
PDGFD-201ENST00000302251 STAM2O75886 525 aa12.9□□□□□ -0.34
PDGFD-201ENST00000302251 RARGP13631 454 aa12.9□□□□□ -0.34
PDGFD-201ENST00000302251 ATP2B4P23634 1241 aa12.9□□□□□ -0.34
PDGFD-201ENST00000302251 CASP5P51878 434 aa12.9□□□□□ -0.34
PDGFD-201ENST00000302251 DNAJC24Q6P3W2 148 aa12.9□□□□□ -0.34
PDGFD-201ENST00000302251 LVRNQ6Q4G3 990 aa12.9□□□□□ -0.34
PDGFD-201ENST00000302251 SCARA5Q6ZMJ2 495 aa12.9□□□□□ -0.34
PDGFD-201ENST00000302251 PPP4R1Q8TF05 950 aa12.9□□□□□ -0.34
PDGFD-201ENST00000302251 PI4K2AQ9BTU6 479 aa12.9□□□□□ -0.34
PDGFD-201ENST00000302251 TMEM206Q9H813 350 aa12.9□□□□□ -0.34
PDGFD-201ENST00000302251 ANKRD36CQ5JPF3 1778 aa12.9□□□□□ -0.34
PDGFD-201ENST00000302251 TNS3Q68CZ2 1445 aa12.9□□□□□ -0.34
PDGFD-201ENST00000302251 CAPN9O14815 690 aa12.9□□□□□ -0.34
PDGFD-201ENST00000302251 LRRC55Q6ZSA7 311 aa12.9□□□□□ -0.34
PDGFD-201ENST00000302251 C3orf20Q8ND61 904 aa12.9□□□□□ -0.34
PDGFD-201ENST00000302251 CEP170P1Q96L14 293 aa12.9□□□□□ -0.34
PDGFD-201ENST00000302251 FERMT1Q9BQL6 677 aa12.9□□□□□ -0.34
PDGFD-201ENST00000302251 THTPAQ9BU02 230 aa12.9□□□□□ -0.34
PDGFD-201ENST00000302251 IKZF4Q9H2S9 585 aa12.9□□□□□ -0.34
PDGFD-201ENST00000302251 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.9□□□□□ -0.34
PDGFD-201ENST00000302251 TAS2R14Q9NYV8 317 aa12.9□□□□□ -0.34
PDGFD-201ENST00000302251 ANGPTL2Q9UKU9 493 aa12.9□□□□□ -0.34
PDGFD-201ENST00000302251 NEU2Q9Y3R4 380 aa12.9□□□□□ -0.34
PDGFD-201ENST00000302251 MYH10P35580 1976 aa12.89□□□□□ -0.35
PDGFD-201ENST00000302251 RIC1Q4ADV7 1423 aa12.89□□□□□ -0.35
PDGFD-201ENST00000302251 F5H6K3 240 aa12.89□□□□□ -0.35
PDGFD-201ENST00000302251 RTN2O75298 545 aa12.89□□□□□ -0.35
PDGFD-201ENST00000302251 GH2P01242 217 aa12.89□□□□□ -0.35
PDGFD-201ENST00000302251 MARK3P27448 753 aa12.89□□□□□ -0.35
PDGFD-201ENST00000302251 MAGEA4P43358 317 aa12.89□□□□□ -0.35
PDGFD-201ENST00000302251 PTENP60484 403 aa12.89□□□□□ -0.35
PDGFD-201ENST00000302251 OSTNP61366 133 aa12.89□□□□□ -0.35
PDGFD-201ENST00000302251 KLRC3Q07444 240 aa12.89□□□□□ -0.35
PDGFD-201ENST00000302251 HADHQ16836 314 aaKnown RBP12.89□□□□□ -0.35
PDGFD-201ENST00000302251 AOC3Q16853 763 aa12.89□□□□□ -0.35
PDGFD-201ENST00000302251 SYDE2Q5VT97 1194 aa12.89□□□□□ -0.35
PDGFD-201ENST00000302251 ISLR2Q6UXK2 745 aa12.89□□□□□ -0.35
PDGFD-201ENST00000302251 AGGF1Q8N302 714 aaeCLIP12.89□□□□□ -0.35
PDGFD-201ENST00000302251 GRAMD1AQ96CP6 724 aa12.89□□□□□ -0.35
PDGFD-201ENST00000302251 FAM213AQ9BRX8 229 aa12.89□□□□□ -0.35
PDGFD-201ENST00000302251 TRAIPQ9BWF2 469 aa12.89□□□□□ -0.35
PDGFD-201ENST00000302251 FGFBP2Q9BYJ0 223 aa12.89□□□□□ -0.35
PDGFD-201ENST00000302251 MRPL47Q9HD33 250 aaKnown RBP12.89□□□□□ -0.35
PDGFD-201ENST00000302251 NR2E1Q9Y466 385 aa12.89□□□□□ -0.35
PDGFD-201ENST00000302251 RNF8O76064 485 aa12.89□□□□□ -0.35
PDGFD-201ENST00000302251 PYGMP11217 842 aa12.89□□□□□ -0.35
PDGFD-201ENST00000302251 EIF2AK2P19525 551 aaKnown RBP12.89□□□□□ -0.35
PDGFD-201ENST00000302251 ITIH2P19823 946 aa12.89□□□□□ -0.35
PDGFD-201ENST00000302251 CNGA1P29973 690 aa12.89□□□□□ -0.35
PDGFD-201ENST00000302251 ZNF543Q08ER8 600 aa12.89□□□□□ -0.35
PDGFD-201ENST00000302251 RABGAP1LQ5R372 815 aa12.89□□□□□ -0.35
PDGFD-201ENST00000302251 DARS2Q6PI48 645 aaKnown RBP12.89□□□□□ -0.35
PDGFD-201ENST00000302251 RHPN2Q8IUC4 686 aa12.89□□□□□ -0.35
PDGFD-201ENST00000302251 DEPTORQ8TB45 409 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms