RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 DNAAF5Q86Y56 855 aa24.1■■□□□ 1.45
SMAD1-201ENST00000302085 TRIM58Q8NG06 486 aa24.1■■□□□ 1.45
SMAD1-201ENST00000302085 FNBP1Q96RU3 617 aa24.1■■□□□ 1.45
SMAD1-201ENST00000302085 CNTNAP2Q9UHC6 1331 aa24.1■■□□□ 1.45
SMAD1-201ENST00000302085 COL1A2P08123 1366 aa24.09■■□□□ 1.45
SMAD1-201ENST00000302085 FAM189A1O60320 539 aa24.09■■□□□ 1.45
SMAD1-201ENST00000302085 C4BPAP04003 597 aaKnown RBP24.09■■□□□ 1.45
SMAD1-201ENST00000302085 HARSP12081 509 aaKnown RBP24.09■■□□□ 1.45
SMAD1-201ENST00000302085 PRPF4BQ13523 1007 aaKnown RBP24.09■■□□□ 1.45
SMAD1-201ENST00000302085 CCL14Q16627 93 aa24.09■■□□□ 1.45
SMAD1-201ENST00000302085 ELMO3Q96BJ8 720 aa24.09■■□□□ 1.45
SMAD1-201ENST00000302085 ZFYVE28Q9HCC9 887 aa24.09■■□□□ 1.45
SMAD1-201ENST00000302085 GJD2Q9UKL4 321 aa24.09■■□□□ 1.45
SMAD1-201ENST00000302085 PTPRJQ12913 1337 aa24.09■■□□□ 1.45
SMAD1-201ENST00000302085 ACKR2O00590 384 aa24.09■■□□□ 1.45
SMAD1-201ENST00000302085 DYNC1LI2O43237 492 aaPredicted RBP24.09■■□□□ 1.45
SMAD1-201ENST00000302085 ZNF865P0CJ78 1059 aaPredicted RBP24.09■■□□□ 1.45
SMAD1-201ENST00000302085 TNNI1P19237 187 aa24.09■■□□□ 1.45
SMAD1-201ENST00000302085 DGKDQ16760 1214 aa24.09■■□□□ 1.45
SMAD1-201ENST00000302085 MTHFD1LQ6UB35 978 aa24.09■■□□□ 1.45
SMAD1-201ENST00000302085 PPM1KQ8N3J5 372 aa24.09■■□□□ 1.45
SMAD1-201ENST00000302085 U2AF1L4Q8WU68 220 aaKnown RBP24.09■■□□□ 1.45
SMAD1-201ENST00000302085 TATDN2Q93075 761 aa24.09■■□□□ 1.45
SMAD1-201ENST00000302085 NT5C1BQ96P26 610 aa24.09■■□□□ 1.45
SMAD1-201ENST00000302085 TCHPQ9BT92 498 aa24.09■■□□□ 1.45
SMAD1-201ENST00000302085 MINDY3Q9H8M7 445 aa24.09■■□□□ 1.45
SMAD1-201ENST00000302085 GNEQ9Y223 722 aaKnown RBP24.09■■□□□ 1.45
SMAD1-201ENST00000302085 ANO9A1A5B4 782 aa24.08■■□□□ 1.45
SMAD1-201ENST00000302085 BUB1O43683 1085 aa24.08■■□□□ 1.45
SMAD1-201ENST00000302085 MFAP3P55082 362 aa24.08■■□□□ 1.45
SMAD1-201ENST00000302085 MBTD1Q05BQ5 628 aa24.08■■□□□ 1.45
SMAD1-201ENST00000302085 ELF2Q15723 593 aa24.08■■□□□ 1.45
SMAD1-201ENST00000302085 ZACNQ401N2 412 aa24.08■■□□□ 1.45
SMAD1-201ENST00000302085 GLYCTKQ8IVS8 523 aa24.08■■□□□ 1.45
SMAD1-201ENST00000302085 FAM71AQ8IYT1 594 aa24.08■■□□□ 1.45
SMAD1-201ENST00000302085 NOX5Q96PH1 765 aa24.08■■□□□ 1.45
SMAD1-201ENST00000302085 ZIC5Q96T25 663 aa24.08■■□□□ 1.45
SMAD1-201ENST00000302085 PI4K2AQ9BTU6 479 aa24.08■■□□□ 1.45
SMAD1-201ENST00000302085 EFCAB8A8MWE9 144 aa24.07■■□□□ 1.44
SMAD1-201ENST00000302085 INO80B-WBP1J3KQ70 363 aa24.07■■□□□ 1.44
SMAD1-201ENST00000302085 CYP2B6P20813 491 aa24.07■■□□□ 1.44
SMAD1-201ENST00000302085 CYP2C19P33261 490 aa24.07■■□□□ 1.44
SMAD1-201ENST00000302085 MCL1Q07820 350 aa24.07■■□□□ 1.44
SMAD1-201ENST00000302085 CRHR2Q13324 411 aa24.07■■□□□ 1.44
SMAD1-201ENST00000302085 MARCH8Q5T0T0 291 aa24.07■■□□□ 1.44
SMAD1-201ENST00000302085 TDRD10Q5VZ19 366 aaKnown RBP24.07■■□□□ 1.44
SMAD1-201ENST00000302085 TSHZ1Q6ZSZ6 1077 aa24.07■■□□□ 1.44
SMAD1-201ENST00000302085 CCDC102AQ96A19 550 aa24.07■■□□□ 1.44
SMAD1-201ENST00000302085 INO80BQ9C086 356 aaPredicted RBP24.07■■□□□ 1.44
SMAD1-201ENST00000302085 IFT122Q9HBG6 1241 aa24.07■■□□□ 1.44
SMAD1-201ENST00000302085 PTPRHQ9HD43 1115 aa24.07■■□□□ 1.44
SMAD1-201ENST00000302085 JRKLQ9Y4A0 524 aa24.07■■□□□ 1.44
SMAD1-201ENST00000302085 BTNL10A8MVZ5 291 aa24.07■■□□□ 1.44
SMAD1-201ENST00000302085 B4GALT5O43286 388 aa24.07■■□□□ 1.44
SMAD1-201ENST00000302085 IQCF3P0C7M6 154 aa24.07■■□□□ 1.44
SMAD1-201ENST00000302085 PROZP22891 400 aa24.07■■□□□ 1.44
SMAD1-201ENST00000302085 TNFSF9P41273 254 aa24.07■■□□□ 1.44
SMAD1-201ENST00000302085 POU5F1BQ06416 359 aa24.07■■□□□ 1.44
SMAD1-201ENST00000302085 IRF5Q13568 498 aa24.07■■□□□ 1.44
SMAD1-201ENST00000302085 WHAMMP3Q1A5X7 153 aa24.07■■□□□ 1.44
SMAD1-201ENST00000302085 OLFML2BQ68BL8 750 aa24.07■■□□□ 1.44
SMAD1-201ENST00000302085 SHC3Q92529 594 aa24.07■■□□□ 1.44
SMAD1-201ENST00000302085 CGRRF1Q99675 332 aa24.07■■□□□ 1.44
SMAD1-201ENST00000302085 AGPAT1Q99943 283 aa24.07■■□□□ 1.44
SMAD1-201ENST00000302085 NFKBIZQ9BYH8 718 aa24.07■■□□□ 1.44
SMAD1-201ENST00000302085 A6NJR5 290 aa24.06■■□□□ 1.44
SMAD1-201ENST00000302085 TNFAIP3P21580 790 aa24.06■■□□□ 1.44
SMAD1-201ENST00000302085 PPFIA1Q13136 1202 aa24.06■■□□□ 1.44
SMAD1-201ENST00000302085 GRIK4Q16099 956 aa24.06■■□□□ 1.44
SMAD1-201ENST00000302085 SRGAP1Q7Z6B7 1085 aa24.06■■□□□ 1.44
SMAD1-201ENST00000302085 SLC20A1Q8WUM9 679 aa24.06■■□□□ 1.44
SMAD1-201ENST00000302085 ALS2CR12Q96Q35 445 aa24.06■■□□□ 1.44
SMAD1-201ENST00000302085 SAR1BQ9Y6B6 198 aa24.06■■□□□ 1.44
SMAD1-201ENST00000302085 SRGAP2O75044 1071 aa24.05■■□□□ 1.44
SMAD1-201ENST00000302085 ZC3H11AO75152 810 aaKnown RBP eCLIP24.05■■□□□ 1.44
SMAD1-201ENST00000302085 VNN1O95497 513 aa24.05■■□□□ 1.44
SMAD1-201ENST00000302085 IGHA2P01877 340 aa24.05■■□□□ 1.44
SMAD1-201ENST00000302085 HLA-DRAP01903 254 aa24.05■■□□□ 1.44
SMAD1-201ENST00000302085 USP8P40818 1118 aa24.05■■□□□ 1.44
SMAD1-201ENST00000302085 NAP1L1P55209 391 aaKnown RBP24.05■■□□□ 1.44
SMAD1-201ENST00000302085 ATF7IP2Q5U623 682 aa24.05■■□□□ 1.44
SMAD1-201ENST00000302085 RSRC2Q7L4I2 434 aaKnown RBP24.05■■□□□ 1.44
SMAD1-201ENST00000302085 BRSK2Q8IWQ3 736 aa24.05■■□□□ 1.44
SMAD1-201ENST00000302085 CEP112Q8N8E3 955 aa24.05■■□□□ 1.44
SMAD1-201ENST00000302085 UBXN4Q92575 508 aa24.05■■□□□ 1.44
SMAD1-201ENST00000302085 PUF60Q9UHX1 559 aaKnown RBP24.05■■□□□ 1.44
SMAD1-201ENST00000302085 MYH10P35580 1976 aa24.05■■□□□ 1.44
SMAD1-201ENST00000302085 A0A087WZ62 844 aa24.05■■□□□ 1.44
SMAD1-201ENST00000302085 OGTO15294 1046 aa24.05■■□□□ 1.44
SMAD1-201ENST00000302085 H2AFZP0C0S5 128 aa24.05■■□□□ 1.44
SMAD1-201ENST00000302085 CTGFP29279 349 aa24.05■■□□□ 1.44
SMAD1-201ENST00000302085 RGS2P41220 211 aa24.05■■□□□ 1.44
SMAD1-201ENST00000302085 TM4SF4P48230 202 aa24.05■■□□□ 1.44
SMAD1-201ENST00000302085 SREBF2Q12772 1141 aa24.05■■□□□ 1.44
SMAD1-201ENST00000302085 EEF1DP3Q658K8 133 aa24.05■■□□□ 1.44
SMAD1-201ENST00000302085 MPZL3Q6UWV2 235 aa24.05■■□□□ 1.44
SMAD1-201ENST00000302085 H2AFVQ71UI9 128 aa24.05■■□□□ 1.44
SMAD1-201ENST00000302085 OR5B17Q8NGF7 314 aa24.05■■□□□ 1.44
SMAD1-201ENST00000302085 FDXACB1Q9BRP7 624 aaPredicted RBP24.05■■□□□ 1.44
SMAD1-201ENST00000302085 ABT1Q9ULW3 272 aaKnown RBP24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms