RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 RAD51CO43502 376 aa23.6■■□□□ 1.37
TPM4-201ENST00000300933 FAM153BP0C7A2 387 aa23.6■■□□□ 1.37
TPM4-201ENST00000300933 COPB2P35606 906 aa23.6■■□□□ 1.37
TPM4-201ENST00000300933 LIG4P49917 911 aa23.6■■□□□ 1.37
TPM4-201ENST00000300933 CYP24A1Q07973 514 aa23.6■■□□□ 1.37
TPM4-201ENST00000300933 FAM153CQ494X1 144 aa23.6■■□□□ 1.37
TPM4-201ENST00000300933 SPIRE2Q8WWL2 714 aa23.6■■□□□ 1.37
TPM4-201ENST00000300933 ZNF516Q92618 1163 aa23.6■■□□□ 1.37
TPM4-201ENST00000300933 ZBTB10Q96DT7 871 aa23.6■■□□□ 1.37
TPM4-201ENST00000300933 ZIM3Q96PE6 472 aa23.6■■□□□ 1.37
TPM4-201ENST00000300933 PCYT2Q99447 389 aa23.6■■□□□ 1.37
TPM4-201ENST00000300933 HAPLN2Q9GZV7 340 aa23.6■■□□□ 1.37
TPM4-201ENST00000300933 FAM153AQ9UHL3 310 aa23.6■■□□□ 1.37
TPM4-201ENST00000300933 KIAA0754O94854 1291 aa23.59■■□□□ 1.37
TPM4-201ENST00000300933 CLSTN1O94985 981 aa23.59■■□□□ 1.37
TPM4-201ENST00000300933 EDN1P05305 212 aa23.59■■□□□ 1.37
TPM4-201ENST00000300933 CHRNB2P17787 502 aa23.59■■□□□ 1.37
TPM4-201ENST00000300933 MAP2K2P36507 400 aa23.59■■□□□ 1.37
TPM4-201ENST00000300933 IFI16Q16666 785 aaKnown RBP23.59■■□□□ 1.37
TPM4-201ENST00000300933 AADACL2Q6P093 401 aa23.59■■□□□ 1.37
TPM4-201ENST00000300933 PHLDB2Q86SQ0 1253 aa23.59■■□□□ 1.37
TPM4-201ENST00000300933 CHST13Q8NET6 341 aa23.59■■□□□ 1.37
TPM4-201ENST00000300933 BTBD6Q96KE9 485 aa23.59■■□□□ 1.37
TPM4-201ENST00000300933 DDX47Q9H0S4 455 aaKnown RBP23.59■■□□□ 1.37
TPM4-201ENST00000300933 ASCC2Q9H1I8 757 aaPredicted RBP23.59■■□□□ 1.37
TPM4-201ENST00000300933 GSTTP1A0A1W2PQM5 241 aa23.59■■□□□ 1.37
TPM4-201ENST00000300933 TTLL13PA6NNM8 815 aa23.59■■□□□ 1.37
TPM4-201ENST00000300933 OATP04181 439 aa23.59■■□□□ 1.37
TPM4-201ENST00000300933 GUCY2FP51841 1108 aa23.59■■□□□ 1.37
TPM4-201ENST00000300933 EPHB4P54760 987 aa23.59■■□□□ 1.37
TPM4-201ENST00000300933 NLRP11P59045 1033 aaKnown RBP23.59■■□□□ 1.37
TPM4-201ENST00000300933 RFFLQ8WZ73 363 aa23.59■■□□□ 1.37
TPM4-201ENST00000300933 NR2E1Q9Y466 385 aa23.59■■□□□ 1.37
TPM4-201ENST00000300933 TMEM253P0C7T8 217 aa23.58■■□□□ 1.37
TPM4-201ENST00000300933 CCDC172P0C7W6 258 aa23.58■■□□□ 1.37
TPM4-201ENST00000300933 GLRA2P23416 452 aa23.58■■□□□ 1.37
TPM4-201ENST00000300933 SSTR3P32745 418 aaPredicted RBP23.58■■□□□ 1.37
TPM4-201ENST00000300933 GUCY1A3Q02108 690 aa23.58■■□□□ 1.37
TPM4-201ENST00000300933 NNTQ13423 1086 aa23.58■■□□□ 1.37
TPM4-201ENST00000300933 SPOPLQ6IQ16 392 aa23.58■■□□□ 1.37
TPM4-201ENST00000300933 HELQQ8TDG4 1101 aa23.58■■□□□ 1.37
TPM4-201ENST00000300933 EPS8L1Q8TE68 723 aa23.58■■□□□ 1.37
TPM4-201ENST00000300933 TARS2Q9BW92 718 aaKnown RBP23.58■■□□□ 1.37
TPM4-201ENST00000300933 CXorf56Q9H5V9 222 aa23.58■■□□□ 1.37
TPM4-201ENST00000300933 RAB20Q9NX57 234 aa23.58■■□□□ 1.37
TPM4-201ENST00000300933 ARHGAP28Q9P2N2 729 aa23.58■■□□□ 1.37
TPM4-201ENST00000300933 STXBP5LQ9Y2K9 1186 aa23.58■■□□□ 1.37
TPM4-201ENST00000300933 NOC2LQ9Y3T9 749 aaKnown RBP23.58■■□□□ 1.37
TPM4-201ENST00000300933 ARIH2O95376 493 aa23.58■■□□□ 1.37
TPM4-201ENST00000300933 LLGL1Q15334 1064 aa23.58■■□□□ 1.37
TPM4-201ENST00000300933 SLFN11Q7Z7L1 901 aa23.58■■□□□ 1.37
TPM4-201ENST00000300933 DDX42Q86XP3 938 aaKnown RBP eCLIP23.58■■□□□ 1.379e-6■□□□□ 9.6
TPM4-201ENST00000300933 GPD1LQ8N335 351 aa23.58■■□□□ 1.37
TPM4-201ENST00000300933 JPH2Q9BR39 696 aaPredicted RBP23.58■■□□□ 1.37
TPM4-201ENST00000300933 CTTNBP2NLQ9P2B4 639 aa23.58■■□□□ 1.37
TPM4-201ENST00000300933 MAFBQ9Y5Q3 323 aaPredicted RBP23.58■■□□□ 1.37
TPM4-201ENST00000300933 GGPS1O95749 300 aa23.57■■□□□ 1.36
TPM4-201ENST00000300933 ZBTB48P10074 688 aaPredicted RBP23.57■■□□□ 1.36
TPM4-201ENST00000300933 KRT5P13647 590 aa23.57■■□□□ 1.36
TPM4-201ENST00000300933 FBXL13Q8NEE6 735 aa23.57■■□□□ 1.36
TPM4-201ENST00000300933 TMEM8AQ9HCN3 771 aa23.57■■□□□ 1.36
TPM4-201ENST00000300933 PTPRJQ12913 1337 aa23.57■■□□□ 1.36
TPM4-201ENST00000300933 FARP2O94887 1054 aaPredicted RBP23.57■■□□□ 1.36
TPM4-201ENST00000300933 ANXA13P27216 316 aa23.57■■□□□ 1.36
TPM4-201ENST00000300933 C2CD6Q53TS8 623 aa23.57■■□□□ 1.36
TPM4-201ENST00000300933 CNPY4Q8N129 248 aa23.57■■□□□ 1.36
TPM4-201ENST00000300933 DNERQ8NFT8 737 aa23.57■■□□□ 1.36
TPM4-201ENST00000300933 MFSD14AQ96MC6 490 aa23.57■■□□□ 1.36
TPM4-201ENST00000300933 AMFRQ9UKV5 643 aa23.57■■□□□ 1.36
TPM4-201ENST00000300933 P4HA2O15460 535 aa23.56■■□□□ 1.36
TPM4-201ENST00000300933 DKC1O60832 514 aaKnown RBP eCLIP23.56■■□□□ 1.36
TPM4-201ENST00000300933 TNNI1P19237 187 aa23.56■■□□□ 1.36
TPM4-201ENST00000300933 DCAF12L1Q5VU92 463 aa23.56■■□□□ 1.36
TPM4-201ENST00000300933 RIOX2Q8IUF8 465 aa23.56■■□□□ 1.36
TPM4-201ENST00000300933 FAM71AQ8IYT1 594 aa23.56■■□□□ 1.36
TPM4-201ENST00000300933 LMBR1Q8WVP7 490 aa23.56■■□□□ 1.36
TPM4-201ENST00000300933 RNPC3Q96LT9 517 aaKnown RBP23.56■■□□□ 1.36
TPM4-201ENST00000300933 RNF14Q9UBS8 474 aa23.56■■□□□ 1.36
TPM4-201ENST00000300933 INTUQ9ULD6 942 aa23.56■■□□□ 1.36
TPM4-201ENST00000300933 ANKRD62A6NC57 917 aa23.56■■□□□ 1.36
TPM4-201ENST00000300933 TCF7P36402 384 aaPredicted RBP23.56■■□□□ 1.36
TPM4-201ENST00000300933 BRDTQ58F21 947 aaPredicted RBP23.56■■□□□ 1.36
TPM4-201ENST00000300933 CASKIN2Q8WXE0 1202 aa23.56■■□□□ 1.36
TPM4-201ENST00000300933 FBXO40Q9UH90 709 aa23.56■■□□□ 1.36
TPM4-201ENST00000300933 NOCTQ9UK39 431 aaKnown RBP23.56■■□□□ 1.36
TPM4-201ENST00000300933 A0A0A6YYK5 440 aaPredicted RBP23.56■■□□□ 1.36
TPM4-201ENST00000300933 K7ERI5 159 aa23.56■■□□□ 1.36
TPM4-201ENST00000300933 KRIT1O00522 736 aa23.56■■□□□ 1.36
TPM4-201ENST00000300933 YBX3P16989 372 aaKnown RBP eCLIP23.56■■□□□ 1.367e-9■■■■□ 22.4
TPM4-201ENST00000300933 GSCP56915 257 aaPredicted RBP23.56■■□□□ 1.36
TPM4-201ENST00000300933 PPATQ06203 517 aa23.56■■□□□ 1.36
TPM4-201ENST00000300933 HSDL1Q3SXM5 330 aa23.56■■□□□ 1.36
TPM4-201ENST00000300933 RNF187Q5TA31 235 aaPredicted RBP23.56■■□□□ 1.36
TPM4-201ENST00000300933 B4GALNT4Q76KP1 1039 aa23.56■■□□□ 1.36
TPM4-201ENST00000300933 SLC17A8Q8NDX2 589 aa23.56■■□□□ 1.36
TPM4-201ENST00000300933 DEPTORQ8TB45 409 aa23.56■■□□□ 1.36
TPM4-201ENST00000300933 SLC7A3Q8WY07 619 aa23.56■■□□□ 1.36
TPM4-201ENST00000300933 FBXL18Q96ME1 805 aa23.56■■□□□ 1.36
TPM4-201ENST00000300933 C17orf75Q9HAS0 396 aa23.56■■□□□ 1.36
TPM4-201ENST00000300933 STAM2O75886 525 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms