RNA–Protein interactions for RNA: ENST00000299267.8

GABRB3-201, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 4,494 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-201ENST00000299267 TINF2Q9BSI4 451 aa10.88□□□□□ -0.67
GABRB3-201ENST00000299267 C17orf102A2RUQ5 167 aa10.88□□□□□ -0.67
GABRB3-201ENST00000299267 SPDYE5A6NIY4 337 aa10.88□□□□□ -0.67
GABRB3-201ENST00000299267 PI4K2BG5E9Z4 385 aa10.88□□□□□ -0.67
GABRB3-201ENST00000299267 SLC4A1P02730 911 aa10.88□□□□□ -0.67
GABRB3-201ENST00000299267 ATP1A1P05023 1023 aaKnown RBP10.88□□□□□ -0.67
GABRB3-201ENST00000299267 HOXA7P31268 230 aaPredicted RBP10.88□□□□□ -0.67
GABRB3-201ENST00000299267 PTGER2P43116 358 aa10.88□□□□□ -0.67
GABRB3-201ENST00000299267 SARSP49591 514 aaKnown RBP10.88□□□□□ -0.67
GABRB3-201ENST00000299267 CEP85LQ5SZL2 805 aa10.88□□□□□ -0.67
GABRB3-201ENST00000299267 KLHDC7AQ5VTJ3 777 aa10.88□□□□□ -0.67
GABRB3-201ENST00000299267 RBBP8NLQ8NC74 664 aaPredicted RBP10.88□□□□□ -0.67
GABRB3-201ENST00000299267 REPS2Q8NFH8 660 aa10.88□□□□□ -0.67
GABRB3-201ENST00000299267 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.88□□□□□ -0.67
GABRB3-201ENST00000299267 UBA3Q8TBC4 463 aa10.88□□□□□ -0.67
GABRB3-201ENST00000299267 GMLQ99445 158 aa10.88□□□□□ -0.67
GABRB3-201ENST00000299267 STK33Q9BYT3 514 aa10.88□□□□□ -0.67
GABRB3-201ENST00000299267 DAAM1Q9Y4D1 1078 aa10.88□□□□□ -0.67
GABRB3-201ENST00000299267 KIAA0100Q14667 2235 aaKnown RBP10.88□□□□□ -0.67
GABRB3-201ENST00000299267 ASAP2O43150 1006 aa10.87□□□□□ -0.67
GABRB3-201ENST00000299267 MOCS2O96007 188 aaPredicted RBP10.87□□□□□ -0.67
GABRB3-201ENST00000299267 SCP2P22307 547 aa10.87□□□□□ -0.67
GABRB3-201ENST00000299267 TBXAS1P24557 533 aaPredicted RBP10.87□□□□□ -0.67
GABRB3-201ENST00000299267 MRPS9P82933 396 aaKnown RBP10.87□□□□□ -0.67
GABRB3-201ENST00000299267 RWDD4Q6NW29 188 aaKnown RBP10.87□□□□□ -0.67
GABRB3-201ENST00000299267 NSMCE1Q8WV22 266 aa10.87□□□□□ -0.67
GABRB3-201ENST00000299267 TRIM11Q96F44 468 aa10.87□□□□□ -0.67
GABRB3-201ENST00000299267 DUSP9Q99956 384 aaKnown RBP10.87□□□□□ -0.67
GABRB3-201ENST00000299267 SIK2Q9H0K1 926 aa10.87□□□□□ -0.67
GABRB3-201ENST00000299267 RSPH14Q9UHP6 348 aa10.87□□□□□ -0.67
GABRB3-201ENST00000299267 SNCAIPQ9Y6H5 919 aa10.87□□□□□ -0.67
GABRB3-201ENST00000299267 SLC16A3O15427 465 aaKnown RBP10.87□□□□□ -0.67
GABRB3-201ENST00000299267 ZRANB2O95218 330 aaKnown RBP eCLIP10.87□□□□□ -0.67
GABRB3-201ENST00000299267 CXCL8P10145 99 aa10.87□□□□□ -0.67
GABRB3-201ENST00000299267 SAT1P21673 171 aa10.87□□□□□ -0.67
GABRB3-201ENST00000299267 AKAP5P24588 427 aa10.87□□□□□ -0.67
GABRB3-201ENST00000299267 NUMBP49757 651 aa10.87□□□□□ -0.67
GABRB3-201ENST00000299267 SLC12A3P55017 1021 aa10.87□□□□□ -0.67
GABRB3-201ENST00000299267 NME3Q13232 169 aa10.87□□□□□ -0.67
GABRB3-201ENST00000299267 TMEM119Q4V9L6 283 aa10.87□□□□□ -0.67
GABRB3-201ENST00000299267 GPR142Q7Z601 462 aa10.87□□□□□ -0.67
GABRB3-201ENST00000299267 SENP7Q9BQF6 1050 aa10.87□□□□□ -0.67
GABRB3-201ENST00000299267 DDX47Q9H0S4 455 aaKnown RBP10.87□□□□□ -0.67
GABRB3-201ENST00000299267 EIF3CLB5ME19 914 aaKnown RBP10.87□□□□□ -0.67
GABRB3-201ENST00000299267 EXTL3O43909 919 aa10.87□□□□□ -0.67
GABRB3-201ENST00000299267 CYP3A4P08684 503 aa10.87□□□□□ -0.67
GABRB3-201ENST00000299267 CPB1P15086 417 aa10.87□□□□□ -0.67
GABRB3-201ENST00000299267 BASP1P80723 227 aaKnown RBP10.87□□□□□ -0.67
GABRB3-201ENST00000299267 SMAD1Q15797 465 aaKnown RBP10.87□□□□□ -0.67
GABRB3-201ENST00000299267 TRIM65Q6PJ69 517 aa10.87□□□□□ -0.67
GABRB3-201ENST00000299267 LBX2Q6XYB7 198 aa10.87□□□□□ -0.67
GABRB3-201ENST00000299267 MMS22LQ6ZRQ5 1243 aa10.87□□□□□ -0.67
GABRB3-201ENST00000299267 SIAH1Q8IUQ4 282 aa10.87□□□□□ -0.67
GABRB3-201ENST00000299267 RHOT2Q8IXI1 618 aa10.87□□□□□ -0.67
GABRB3-201ENST00000299267 ETNPPLQ8TBG4 499 aa10.87□□□□□ -0.67
GABRB3-201ENST00000299267 RPGRIP1Q96KN7 1286 aa10.87□□□□□ -0.67
GABRB3-201ENST00000299267 EIF3CQ99613 913 aaKnown RBP10.87□□□□□ -0.67
GABRB3-201ENST00000299267 TMEM106CQ9BVX2 250 aa10.87□□□□□ -0.67
GABRB3-201ENST00000299267 ATP8A1Q9Y2Q0 1164 aa10.87□□□□□ -0.67
GABRB3-201ENST00000299267 A0A087X0T9 212 aa10.86□□□□□ -0.67
GABRB3-201ENST00000299267 IGKV6D-41A0A0C4DH26 115 aa10.86□□□□□ -0.67
GABRB3-201ENST00000299267 RRN3P2A6NIE6 340 aa10.86□□□□□ -0.67
GABRB3-201ENST00000299267 B3GAT3O94766 335 aa10.86□□□□□ -0.67
GABRB3-201ENST00000299267 FAM228BP0C875 321 aa10.86□□□□□ -0.67
GABRB3-201ENST00000299267 SPATA31C1P0DKV0 1188 aa10.86□□□□□ -0.67
GABRB3-201ENST00000299267 PON1P27169 355 aa10.86□□□□□ -0.67
GABRB3-201ENST00000299267 OR1G1P47890 313 aa10.86□□□□□ -0.67
GABRB3-201ENST00000299267 RBP5P82980 135 aa10.86□□□□□ -0.67
GABRB3-201ENST00000299267 MDM2Q00987 491 aaPredicted RBP10.86□□□□□ -0.67
GABRB3-201ENST00000299267 NPY5RQ15761 445 aa10.86□□□□□ -0.67
GABRB3-201ENST00000299267 GRIK4Q16099 956 aa10.86□□□□□ -0.67
GABRB3-201ENST00000299267 C10orf76Q5T2E6 689 aa10.86□□□□□ -0.67
GABRB3-201ENST00000299267 CPLX4Q7Z7G2 160 aa10.86□□□□□ -0.67
GABRB3-201ENST00000299267 PALM2Q8IXS6 379 aa10.86□□□□□ -0.67
GABRB3-201ENST00000299267 GSPT2Q8IYD1 628 aaKnown RBP10.86□□□□□ -0.67
GABRB3-201ENST00000299267 FAM76AQ8TAV0 307 aa10.86□□□□□ -0.67
GABRB3-201ENST00000299267 MAIP1Q8WWC4 291 aa10.86□□□□□ -0.67
GABRB3-201ENST00000299267 LENG1Q96BZ8 264 aaPredicted RBP10.86□□□□□ -0.67
GABRB3-201ENST00000299267 MS4A14Q96JA4 679 aa10.86□□□□□ -0.67
GABRB3-201ENST00000299267 PARD6BQ9BYG5 372 aa10.86□□□□□ -0.67
GABRB3-201ENST00000299267 AFG3L2Q9Y4W6 797 aa10.86□□□□□ -0.67
GABRB3-201ENST00000299267 STRCP1A6NGW2 1772 aa10.86□□□□□ -0.67
GABRB3-201ENST00000299267 STRCQ7RTU9 1775 aa10.86□□□□□ -0.67
GABRB3-201ENST00000299267 C2CD2LO14523 706 aa10.86□□□□□ -0.67
GABRB3-201ENST00000299267 OGTO15294 1046 aa10.86□□□□□ -0.67
GABRB3-201ENST00000299267 ATF2P15336 505 aa10.86□□□□□ -0.67
GABRB3-201ENST00000299267 KCNA3P22001 575 aa10.86□□□□□ -0.67
GABRB3-201ENST00000299267 NAMPTP43490 491 aa10.86□□□□□ -0.67
GABRB3-201ENST00000299267 ATP1A2P50993 1020 aa10.86□□□□□ -0.67
GABRB3-201ENST00000299267 RWDD2BP57060 319 aa10.86□□□□□ -0.67
GABRB3-201ENST00000299267 SEMA3FQ13275 785 aa10.86□□□□□ -0.67
GABRB3-201ENST00000299267 ZRSR2Q15696 482 aaKnown RBP10.86□□□□□ -0.67
GABRB3-201ENST00000299267 SV2AQ7L0J3 742 aa10.86□□□□□ -0.67
GABRB3-201ENST00000299267 TTC7AQ9ULT0 858 aaPredicted RBP10.86□□□□□ -0.67
GABRB3-201ENST00000299267 UBIAD1Q9Y5Z9 338 aa10.86□□□□□ -0.67
GABRB3-201ENST00000299267 CICQ96RK0 1608 aaPredicted RBP10.86□□□□□ -0.67
GABRB3-201ENST00000299267 PHLPP2Q6ZVD8 1323 aa10.86□□□□□ -0.67
GABRB3-201ENST00000299267 GOLGA6CA6NDK9 693 aa10.86□□□□□ -0.67
GABRB3-201ENST00000299267 ANKRD63C9JTQ0 380 aa10.86□□□□□ -0.67
GABRB3-201ENST00000299267 PIK3CDO00329 1044 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms