RNA–Protein interactions for RNA: ENST00000298532.2

SNAPC4-201, Transcript of small nuclear RNA activating complex polypeptide 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC4, Length 5,010 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4-201ENST00000298532 RNF169Q8NCN4 708 aa17.45■□□□□ 0.38
SNAPC4-201ENST00000298532 LINC00116Q8NCU8 138 aa17.45■□□□□ 0.38
SNAPC4-201ENST00000298532 GCOM2Q9BZD3 368 aaPredicted RBP17.45■□□□□ 0.38
SNAPC4-201ENST00000298532 CPVLQ9H3G5 476 aa17.45■□□□□ 0.38
SNAPC4-201ENST00000298532 DCP1AQ9NPI6 582 aaPredicted RBP17.45■□□□□ 0.38
SNAPC4-201ENST00000298532 TMEM120BA0PK00 339 aa17.44■□□□□ 0.38
SNAPC4-201ENST00000298532 POTEFA5A3E0 1075 aa17.44■□□□□ 0.38
SNAPC4-201ENST00000298532 PPP1R12AO14974 1030 aaPredicted RBP17.44■□□□□ 0.38
SNAPC4-201ENST00000298532 POTEIP0CG38 1075 aa17.44■□□□□ 0.38
SNAPC4-201ENST00000298532 RPS12P25398 132 aaKnown RBP17.44■□□□□ 0.38
SNAPC4-201ENST00000298532 ARSEP51690 589 aa17.44■□□□□ 0.38
SNAPC4-201ENST00000298532 IGBP1P78318 339 aa17.44■□□□□ 0.38
SNAPC4-201ENST00000298532 KDSRQ06136 332 aa17.44■□□□□ 0.38
SNAPC4-201ENST00000298532 CNGA3Q16281 694 aa17.44■□□□□ 0.38
SNAPC4-201ENST00000298532 POTEGQ6S5H5 508 aa17.44■□□□□ 0.38
SNAPC4-201ENST00000298532 POTEEQ6S8J3 1075 aa17.44■□□□□ 0.38
SNAPC4-201ENST00000298532 MOV10L1Q9BXT6 1211 aaKnown RBP17.44■□□□□ 0.38
SNAPC4-201ENST00000298532 TMEM260Q9NX78 707 aa17.44■□□□□ 0.38
SNAPC4-201ENST00000298532 HOXC10Q9NYD6 342 aa17.44■□□□□ 0.38
SNAPC4-201ENST00000298532 VWDEQ8N2E2 1590 aa17.44■□□□□ 0.38
SNAPC4-201ENST00000298532 SMARCA1P28370 1054 aa17.44■□□□□ 0.38
SNAPC4-201ENST00000298532 SLC1A1P43005 524 aa17.44■□□□□ 0.38
SNAPC4-201ENST00000298532 PDIA5Q14554 519 aa17.44■□□□□ 0.38
SNAPC4-201ENST00000298532 JAMLQ86YT9 394 aa17.44■□□□□ 0.38
SNAPC4-201ENST00000298532 SLC35G2Q8TBE7 412 aa17.44■□□□□ 0.38
SNAPC4-201ENST00000298532 SKA2Q8WVK7 121 aaPredicted RBP17.44■□□□□ 0.38
SNAPC4-201ENST00000298532 TSSK1BQ9BXA7 367 aa17.44■□□□□ 0.38
SNAPC4-201ENST00000298532 CCND2P30279 289 aa17.44■□□□□ 0.38
SNAPC4-201ENST00000298532 ZNF667Q5HYK9 610 aa17.44■□□□□ 0.38
SNAPC4-201ENST00000298532 DCAF4Q8WV16 495 aa17.44■□□□□ 0.38
SNAPC4-201ENST00000298532 NPHS2Q9NP85 383 aa17.44■□□□□ 0.38
SNAPC4-201ENST00000298532 GTSE1Q9NYZ3 720 aa17.44■□□□□ 0.38
SNAPC4-201ENST00000298532 HACL1Q9UJ83 578 aa17.44■□□□□ 0.38
SNAPC4-201ENST00000298532 LRRIQ3A6PVS8 624 aaPredicted RBP17.44■□□□□ 0.38
SNAPC4-201ENST00000298532 RGL2O15211 777 aa17.44■□□□□ 0.38
SNAPC4-201ENST00000298532 ENO1P06733 434 aaKnown RBP17.44■□□□□ 0.38
SNAPC4-201ENST00000298532 FDPSP14324 419 aaKnown RBP17.44■□□□□ 0.38
SNAPC4-201ENST00000298532 ZNF18P17022 549 aa17.44■□□□□ 0.38
SNAPC4-201ENST00000298532 EFTUD2Q15029 972 aaKnown RBP eCLIP17.44■□□□□ 0.386e-8■■■■■ 32.7
SNAPC4-201ENST00000298532 SCHIP1Q9P0W5 487 aaPredicted RBP17.44■□□□□ 0.38
SNAPC4-201ENST00000298532 PAIP2BQ9ULR5 123 aaKnown RBP17.44■□□□□ 0.38
SNAPC4-201ENST00000298532 HEY1Q9Y5J3 304 aa17.44■□□□□ 0.38
SNAPC4-201ENST00000298532 ASAP2O43150 1006 aa17.43■□□□□ 0.38
SNAPC4-201ENST00000298532 STRIP1Q5VSL9 837 aa17.43■□□□□ 0.38
SNAPC4-201ENST00000298532 DAB2IPQ5VWQ8 1189 aa17.43■□□□□ 0.38
SNAPC4-201ENST00000298532 RSRC2Q7L4I2 434 aaKnown RBP17.43■□□□□ 0.38
SNAPC4-201ENST00000298532 GIMAP8Q8ND71 665 aaPredicted RBP17.43■□□□□ 0.38
SNAPC4-201ENST00000298532 ERP44Q9BS26 406 aa17.43■□□□□ 0.38
SNAPC4-201ENST00000298532 FOXP3Q9BZS1 431 aa17.43■□□□□ 0.38
SNAPC4-201ENST00000298532 TMEM131LA2VDJ0 1609 aa17.43■□□□□ 0.38
SNAPC4-201ENST00000298532 PNPLA7Q6ZV29 1317 aa17.43■□□□□ 0.38
SNAPC4-201ENST00000298532 SLC16A3O15427 465 aaKnown RBP17.43■□□□□ 0.38
SNAPC4-201ENST00000298532 ORC4O43929 436 aa17.43■□□□□ 0.38
SNAPC4-201ENST00000298532 TRIM49P0CI25 452 aa17.43■□□□□ 0.38
SNAPC4-201ENST00000298532 TRIM49CP0CI26 452 aa17.43■□□□□ 0.38
SNAPC4-201ENST00000298532 RYBPQ8N488 228 aaPredicted RBP17.43■□□□□ 0.38
SNAPC4-201ENST00000298532 SCG3Q8WXD2 468 aaKnown RBP17.43■□□□□ 0.38
SNAPC4-201ENST00000298532 RBM15Q96T37 977 aaKnown RBP eCLIP17.43■□□□□ 0.382e-7■■■■□ 20.8
SNAPC4-201ENST00000298532 VCPKMTQ9H867 229 aa17.43■□□□□ 0.38
SNAPC4-201ENST00000298532 H3BQF6 201 aa17.43■□□□□ 0.38
SNAPC4-201ENST00000298532 E2F6O75461 281 aa17.43■□□□□ 0.38
SNAPC4-201ENST00000298532 TBXAS1P24557 533 aaPredicted RBP17.43■□□□□ 0.38
SNAPC4-201ENST00000298532 GPSM2P81274 684 aa17.43■□□□□ 0.38
SNAPC4-201ENST00000298532 EZH2Q15910 746 aaKnown RBP17.43■□□□□ 0.38
SNAPC4-201ENST00000298532 USP49Q70CQ1 688 aa17.43■□□□□ 0.38
SNAPC4-201ENST00000298532 ANKS1AQ92625 1134 aa17.43■□□□□ 0.38
SNAPC4-201ENST00000298532 DLGAP2Q9P1A6 1054 aa17.43■□□□□ 0.38
SNAPC4-201ENST00000298532 NBPF26B4DH59 902 aa17.43■□□□□ 0.38
SNAPC4-201ENST00000298532 USP17L15C9J2P7 530 aa17.43■□□□□ 0.38
SNAPC4-201ENST00000298532 USP17L13C9JLJ4 530 aa17.43■□□□□ 0.38
SNAPC4-201ENST00000298532 USP17L11C9JVI0 530 aa17.43■□□□□ 0.38
SNAPC4-201ENST00000298532 USP17L18D6R9N7 530 aa17.43■□□□□ 0.38
SNAPC4-201ENST00000298532 USP17L22D6RA61 530 aa17.43■□□□□ 0.38
SNAPC4-201ENST00000298532 USP17L17D6RBQ6 530 aa17.43■□□□□ 0.38
SNAPC4-201ENST00000298532 USP17L19D6RCP7 530 aa17.43■□□□□ 0.38
SNAPC4-201ENST00000298532 USP17L20D6RJB6 530 aa17.43■□□□□ 0.38
SNAPC4-201ENST00000298532 ABL1P00519 1130 aa17.43■□□□□ 0.38
SNAPC4-201ENST00000298532 PAMP19021 973 aa17.43■□□□□ 0.38
SNAPC4-201ENST00000298532 HSD17B3P37058 310 aa17.43■□□□□ 0.38
SNAPC4-201ENST00000298532 ARHGDIAP52565 204 aa17.43■□□□□ 0.38
SNAPC4-201ENST00000298532 TGFB2P61812 414 aa17.43■□□□□ 0.38
SNAPC4-201ENST00000298532 YWHAHQ04917 246 aaPredicted RBP17.43■□□□□ 0.38
SNAPC4-201ENST00000298532 USP17L24Q0WX57 530 aa17.43■□□□□ 0.38
SNAPC4-201ENST00000298532 USP17L6PQ6QN14 398 aa17.43■□□□□ 0.38
SNAPC4-201ENST00000298532 NBPF15Q8N660 670 aa17.43■□□□□ 0.38
SNAPC4-201ENST00000298532 MCPH1Q8NEM0 835 aa17.43■□□□□ 0.38
SNAPC4-201ENST00000298532 THAP11Q96EK4 314 aa17.43■□□□□ 0.38
SNAPC4-201ENST00000298532 STK33Q9BYT3 514 aa17.43■□□□□ 0.38
SNAPC4-201ENST00000298532 UBN1Q9NPG3 1134 aa17.43■□□□□ 0.38
SNAPC4-201ENST00000298532 UVRAGQ9P2Y5 699 aa17.43■□□□□ 0.38
SNAPC4-201ENST00000298532 PALM3A6NDB9 673 aaPredicted RBP17.42■□□□□ 0.38
SNAPC4-201ENST00000298532 TDP2O95551 362 aa17.42■□□□□ 0.38
SNAPC4-201ENST00000298532 UCHL3P15374 230 aa17.42■□□□□ 0.38
SNAPC4-201ENST00000298532 JAK3P52333 1124 aa17.42■□□□□ 0.38
SNAPC4-201ENST00000298532 ZNF394Q53GI3 561 aa17.42■□□□□ 0.38
SNAPC4-201ENST00000298532 SIX6OS1Q8N1H7 587 aa17.42■□□□□ 0.38
SNAPC4-201ENST00000298532 SH3RF3Q8TEJ3 882 aaPredicted RBP17.42■□□□□ 0.38
SNAPC4-201ENST00000298532 ZBTB18Q99592 522 aa17.42■□□□□ 0.38
SNAPC4-201ENST00000298532 ALG13Q9NP73 1137 aaKnown RBP17.42■□□□□ 0.38
SNAPC4-201ENST00000298532 DDX42Q86XP3 938 aaKnown RBP eCLIP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms