RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 EXT2Q93063 718 aa11.66□□□□□ -0.54
PBRM1-201ENST00000296302 CMTM5Q96DZ9 223 aa11.66□□□□□ -0.54
PBRM1-201ENST00000296302 C9orf72Q96LT7 481 aa11.66□□□□□ -0.54
PBRM1-201ENST00000296302 ALG13Q9NP73 1137 aaKnown RBP11.66□□□□□ -0.54
PBRM1-201ENST00000296302 NDUFA13Q9P0J0 144 aa11.66□□□□□ -0.54
PBRM1-201ENST00000296302 PCSK1NQ9UHG2 260 aa11.66□□□□□ -0.54
PBRM1-201ENST00000296302 PLAGL2Q9UPG8 496 aa11.66□□□□□ -0.54
PBRM1-201ENST00000296302 NEU2Q9Y3R4 380 aa11.66□□□□□ -0.54
PBRM1-201ENST00000296302 IQGAP3Q86VI3 1631 aa11.66□□□□□ -0.54
PBRM1-201ENST00000296302 ARHGEF37A1IGU5 675 aa11.66□□□□□ -0.54
PBRM1-201ENST00000296302 OSBPP22059 807 aa11.66□□□□□ -0.54
PBRM1-201ENST00000296302 FOXO4P98177 505 aa11.66□□□□□ -0.54
PBRM1-201ENST00000296302 CLEC4GQ6UXB4 293 aa11.66□□□□□ -0.54
PBRM1-201ENST00000296302 BARGINQ6ZT62 677 aa11.66□□□□□ -0.54
PBRM1-201ENST00000296302 CEP95Q96GE4 821 aa11.66□□□□□ -0.54
PBRM1-201ENST00000296302 NSL1Q96IY1 281 aa11.66□□□□□ -0.54
PBRM1-201ENST00000296302 MRGBPQ9NV56 204 aa11.66□□□□□ -0.54
PBRM1-201ENST00000296302 TET3O43151 1660 aa11.66□□□□□ -0.54
PBRM1-201ENST00000296302 B2RBV5 119 aa11.66□□□□□ -0.54
PBRM1-201ENST00000296302 SPAG6O75602 509 aa11.66□□□□□ -0.54
PBRM1-201ENST00000296302 GRAPQ13588 217 aa11.66□□□□□ -0.54
PBRM1-201ENST00000296302 USP49Q70CQ1 688 aa11.66□□□□□ -0.54
PBRM1-201ENST00000296302 DDX42Q86XP3 938 aaKnown RBP eCLIP11.66□□□□□ -0.54
PBRM1-201ENST00000296302 LRRC34Q8IZ02 419 aa11.66□□□□□ -0.54
PBRM1-201ENST00000296302 TTC39CQ8N584 583 aa11.66□□□□□ -0.54
PBRM1-201ENST00000296302 GRAPLQ8TC17 118 aaPredicted RBP11.66□□□□□ -0.54
PBRM1-201ENST00000296302 TEKT4Q8WW24 435 aa11.66□□□□□ -0.54
PBRM1-201ENST00000296302 PABPC3Q9H361 631 aaKnown RBP11.66□□□□□ -0.54
PBRM1-201ENST00000296302 KDM4CQ9H3R0 1056 aa11.66□□□□□ -0.54
PBRM1-201ENST00000296302 FAM205CA6NFA0 338 aa11.65□□□□□ -0.54
PBRM1-201ENST00000296302 KLRC1P26715 233 aa11.65□□□□□ -0.54
PBRM1-201ENST00000296302 PRDX5P30044 214 aa11.65□□□□□ -0.54
PBRM1-201ENST00000296302 QARSP47897 775 aaKnown RBP11.65□□□□□ -0.54
PBRM1-201ENST00000296302 CTCFP49711 727 aaPredicted RBP11.65□□□□□ -0.54
PBRM1-201ENST00000296302 SERPINB9P50453 376 aa11.65□□□□□ -0.54
PBRM1-201ENST00000296302 MTMR1Q13613 665 aa11.65□□□□□ -0.54
PBRM1-201ENST00000296302 SLC29A2Q14542 456 aa11.65□□□□□ -0.54
PBRM1-201ENST00000296302 INPP5AQ14642 412 aa11.65□□□□□ -0.54
PBRM1-201ENST00000296302 TRIP10Q15642 601 aa11.65□□□□□ -0.54
PBRM1-201ENST00000296302 LRRC8EQ6NSJ5 796 aa11.65□□□□□ -0.54
PBRM1-201ENST00000296302 ATG9AQ7Z3C6 839 aa11.65□□□□□ -0.54
PBRM1-201ENST00000296302 ANKMY2Q8IV38 441 aa11.65□□□□□ -0.54
PBRM1-201ENST00000296302 C4orf33Q8N1A6 199 aa11.65□□□□□ -0.54
PBRM1-201ENST00000296302 RAPGEF5Q92565 580 aa11.65□□□□□ -0.54
PBRM1-201ENST00000296302 HIC2Q96JB3 615 aa11.65□□□□□ -0.54
PBRM1-201ENST00000296302 ACAP3Q96P50 834 aa11.65□□□□□ -0.54
PBRM1-201ENST00000296302 CARD9Q9H257 536 aa11.65□□□□□ -0.54
PBRM1-201ENST00000296302 USP17L10C9JJH3 530 aa11.65□□□□□ -0.54
PBRM1-201ENST00000296302 SFNP31947 248 aa11.65□□□□□ -0.54
PBRM1-201ENST00000296302 PSMD7P51665 324 aa11.65□□□□□ -0.54
PBRM1-201ENST00000296302 AP3M2P53677 418 aa11.65□□□□□ -0.54
PBRM1-201ENST00000296302 ERVK-24P63145 666 aa11.65□□□□□ -0.54
PBRM1-201ENST00000296302 KIRREL3Q8IZU9 778 aa11.65□□□□□ -0.54
PBRM1-201ENST00000296302 CASKIN2Q8WXE0 1202 aa11.65□□□□□ -0.54
PBRM1-201ENST00000296302 KCNB2Q92953 911 aa11.65□□□□□ -0.54
PBRM1-201ENST00000296302 ANKRD27Q96NW4 1050 aa11.65□□□□□ -0.54
PBRM1-201ENST00000296302 ISCA1Q9BUE6 129 aa11.65□□□□□ -0.54
PBRM1-201ENST00000296302 TMBIM4Q9HC24 238 aa11.65□□□□□ -0.54
PBRM1-201ENST00000296302 ARHGEF40Q8TER5 1519 aa11.65□□□□□ -0.54
PBRM1-201ENST00000296302 TYW5A2RUC4 315 aaKnown RBP11.65□□□□□ -0.54
PBRM1-201ENST00000296302 CYP26A1O43174 497 aa11.65□□□□□ -0.54
PBRM1-201ENST00000296302 ESRRBO95718 433 aa11.65□□□□□ -0.54
PBRM1-201ENST00000296302 ZBTB41Q5SVQ8 909 aa11.65□□□□□ -0.54
PBRM1-201ENST00000296302 RCSD1Q6JBY9 416 aa11.65□□□□□ -0.54
PBRM1-201ENST00000296302 MTHFD1LQ6UB35 978 aa11.65□□□□□ -0.54
PBRM1-201ENST00000296302 C16orf89Q6UX73 402 aa11.65□□□□□ -0.54
PBRM1-201ENST00000296302 NEDD1Q8NHV4 660 aa11.65□□□□□ -0.54
PBRM1-201ENST00000296302 FAM193BQ96PV7 902 aaPredicted RBP11.65□□□□□ -0.54
PBRM1-201ENST00000296302 MTRQ99707 1265 aa11.65□□□□□ -0.54
PBRM1-201ENST00000296302 EIF2AK1Q9BQI3 630 aaKnown RBP11.65□□□□□ -0.54
PBRM1-201ENST00000296302 THTPAQ9BU02 230 aa11.65□□□□□ -0.54
PBRM1-201ENST00000296302 MAGEB5Q9BZ81 275 aa11.65□□□□□ -0.54
PBRM1-201ENST00000296302 GOLGA8RI6L899 631 aa11.65□□□□□ -0.55
PBRM1-201ENST00000296302 FMO5P49326 533 aa11.65□□□□□ -0.55
PBRM1-201ENST00000296302 TBCCQ15814 346 aa11.65□□□□□ -0.55
PBRM1-201ENST00000296302 ITPRIPL1Q6GPH6 555 aa11.65□□□□□ -0.55
PBRM1-201ENST00000296302 HPS3Q969F9 1004 aa11.65□□□□□ -0.55
PBRM1-201ENST00000296302 O00370 1275 aa11.64□□□□□ -0.55
PBRM1-201ENST00000296302 ANP32DO95626 131 aa11.64□□□□□ -0.55
PBRM1-201ENST00000296302 SRGAP2CP0DJJ0 459 aa11.64□□□□□ -0.55
PBRM1-201ENST00000296302 BRD2P25440 801 aaKnown RBP11.64□□□□□ -0.55
PBRM1-201ENST00000296302 MAP4P27816 1152 aaKnown RBP11.64□□□□□ -0.55
PBRM1-201ENST00000296302 MAGEA4P43358 317 aa11.64□□□□□ -0.55
PBRM1-201ENST00000296302 EIF3EP60228 445 aaKnown RBP11.64□□□□□ -0.55
PBRM1-201ENST00000296302 CDK17Q00537 523 aa11.64□□□□□ -0.55
PBRM1-201ENST00000296302 THNSL1Q8IYQ7 743 aa11.64□□□□□ -0.55
PBRM1-201ENST00000296302 PSPC1Q8WXF1 523 aaKnown RBP11.64□□□□□ -0.55
PBRM1-201ENST00000296302 COA1Q9GZY4 146 aa11.64□□□□□ -0.55
PBRM1-201ENST00000296302 TUFT1Q9NNX1 390 aa11.64□□□□□ -0.55
PBRM1-201ENST00000296302 INPP5FQ9Y2H2 1132 aa11.64□□□□□ -0.55
PBRM1-201ENST00000296302 NRKQ7Z2Y5 1582 aa11.64□□□□□ -0.55
PBRM1-201ENST00000296302 SPDYE2BA6NHP3 402 aa11.64□□□□□ -0.55
PBRM1-201ENST00000296302 SPDYE6P0CI01 402 aa11.64□□□□□ -0.55
PBRM1-201ENST00000296302 STAT3P40763 770 aa11.64□□□□□ -0.55
PBRM1-201ENST00000296302 ANTXR2P58335 489 aa11.64□□□□□ -0.55
PBRM1-201ENST00000296302 TNFAIP2Q03169 654 aa11.64□□□□□ -0.55
PBRM1-201ENST00000296302 CENPCQ03188 943 aa11.64□□□□□ -0.55
PBRM1-201ENST00000296302 SCARF1Q14162 830 aa11.64□□□□□ -0.55
PBRM1-201ENST00000296302 CEP55Q53EZ4 464 aa11.64□□□□□ -0.55
PBRM1-201ENST00000296302 TEX2Q8IWB9 1127 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms