RNA–Protein interactions for RNA: ENST00000296273.6

RFC4-201, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC4, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-201ENST00000296273 GPR152Q8TDT2 470 aa11.72□□□□□ -0.53
RFC4-201ENST00000296273 ZNF707Q96C28 371 aaPredicted RBP11.72□□□□□ -0.53
RFC4-201ENST00000296273 SHDQ96IW2 340 aa11.72□□□□□ -0.53
RFC4-201ENST00000296273 ZNF396Q96N95 335 aaPredicted RBP11.72□□□□□ -0.53
RFC4-201ENST00000296273 GAD1Q99259 594 aa11.72□□□□□ -0.53
RFC4-201ENST00000296273 MTRQ99707 1265 aa11.72□□□□□ -0.53
RFC4-201ENST00000296273 NAP1L4Q99733 375 aaKnown RBP11.72□□□□□ -0.53
RFC4-201ENST00000296273 LXNQ9BS40 222 aa11.72□□□□□ -0.53
RFC4-201ENST00000296273 PRKD2Q9BZL6 878 aa11.72□□□□□ -0.53
RFC4-201ENST00000296273 TRIM6Q9C030 488 aaPredicted RBP11.72□□□□□ -0.53
RFC4-201ENST00000296273 CSRNP2Q9H175 543 aa11.72□□□□□ -0.53
RFC4-201ENST00000296273 ARHGEF3Q9NR81 526 aa11.72□□□□□ -0.53
RFC4-201ENST00000296273 SLC2A4RGQ9NR83 387 aa11.72□□□□□ -0.53
RFC4-201ENST00000296273 VAV3Q9UKW4 847 aa11.72□□□□□ -0.53
RFC4-201ENST00000296273 ZMYM2Q9UBW7 1377 aa11.72□□□□□ -0.53
RFC4-201ENST00000296273 CCDC194A0A1B0GVG4 234 aa11.71□□□□□ -0.53
RFC4-201ENST00000296273 ANHXE9PGG2 379 aa11.71□□□□□ -0.53
RFC4-201ENST00000296273 TGM5O43548 720 aa11.71□□□□□ -0.53
RFC4-201ENST00000296273 SLC37A4O43826 429 aa11.71□□□□□ -0.53
RFC4-201ENST00000296273 TSPAN1O60635 241 aa11.71□□□□□ -0.53
RFC4-201ENST00000296273 XRCC6P12956 609 aaKnown RBP eCLIP11.71□□□□□ -0.53
RFC4-201ENST00000296273 SCNN1GP51170 649 aa11.71□□□□□ -0.53
RFC4-201ENST00000296273 PTENP60484 403 aa11.71□□□□□ -0.53
RFC4-201ENST00000296273 NPY5RQ15761 445 aa11.71□□□□□ -0.53
RFC4-201ENST00000296273 XKR9Q5GH70 373 aa11.71□□□□□ -0.53
RFC4-201ENST00000296273 FOXD4L5Q5VV16 416 aaPredicted RBP11.71□□□□□ -0.53
RFC4-201ENST00000296273 FUT10Q6P4F1 479 aa11.71□□□□□ -0.53
RFC4-201ENST00000296273 GET4Q7L5D6 327 aaPredicted RBP11.71□□□□□ -0.53
RFC4-201ENST00000296273 NEK8Q86SG6 692 aa11.71□□□□□ -0.53
RFC4-201ENST00000296273 IFNLR1Q8IU57 520 aaPredicted RBP11.71□□□□□ -0.53
RFC4-201ENST00000296273 C1orf210Q8IVY1 113 aa11.71□□□□□ -0.53
RFC4-201ENST00000296273 ZNF579Q8NAF0 562 aaKnown RBP11.71□□□□□ -0.53
RFC4-201ENST00000296273 FOXD4L4Q8WXT5 416 aaPredicted RBP11.71□□□□□ -0.53
RFC4-201ENST00000296273 WASF1Q92558 559 aa11.71□□□□□ -0.53
RFC4-201ENST00000296273 EIF2AQ9BY44 585 aaKnown RBP11.71□□□□□ -0.53
RFC4-201ENST00000296273 ZSWIM4Q9H7M6 989 aa11.71□□□□□ -0.53
RFC4-201ENST00000296273 WRAP73Q9P2S5 460 aaPredicted RBP11.71□□□□□ -0.53
RFC4-201ENST00000296273 ADAM28Q9UKQ2 775 aa11.71□□□□□ -0.53
RFC4-201ENST00000296273 VPS13AQ96RL7 3174 aa11.71□□□□□ -0.54
RFC4-201ENST00000296273 DCHS1Q96JQ0 3298 aa11.7□□□□□ -0.54
RFC4-201ENST00000296273 GOLGA6L4A6NEF3 574 aa11.7□□□□□ -0.54
RFC4-201ENST00000296273 MARCH6O60337 910 aa11.7□□□□□ -0.54
RFC4-201ENST00000296273 XBP1P17861 261 aa11.7□□□□□ -0.54
RFC4-201ENST00000296273 STARD6P59095 220 aa11.7□□□□□ -0.54
RFC4-201ENST00000296273 GRIK3Q13003 919 aa11.7□□□□□ -0.54
RFC4-201ENST00000296273 HTR4Q13639 388 aa11.7□□□□□ -0.54
RFC4-201ENST00000296273 PUM1Q14671 1186 aaKnown RBP eCLIP11.7□□□□□ -0.54
RFC4-201ENST00000296273 LILRA6Q6PI73 481 aa11.7□□□□□ -0.54
RFC4-201ENST00000296273 DCLRE1AQ6PJP8 1040 aa11.7□□□□□ -0.54
RFC4-201ENST00000296273 DGLUCYQ7Z3D6 616 aa11.7□□□□□ -0.54
RFC4-201ENST00000296273 BRAPQ7Z569 592 aa11.7□□□□□ -0.54
RFC4-201ENST00000296273 PALB2Q86YC2 1186 aa11.7□□□□□ -0.54
RFC4-201ENST00000296273 SLFN12Q8IYM2 578 aa11.7□□□□□ -0.54
RFC4-201ENST00000296273 RIN2Q8WYP3 895 aaPredicted RBP11.7□□□□□ -0.54
RFC4-201ENST00000296273 RUBCNQ92622 972 aa11.7□□□□□ -0.54
RFC4-201ENST00000296273 RMDN1Q96DB5 314 aa11.7□□□□□ -0.54
RFC4-201ENST00000296273 NFKBIZQ9BYH8 718 aa11.7□□□□□ -0.54
RFC4-201ENST00000296273 MIOSQ9NXC5 875 aa11.7□□□□□ -0.54
RFC4-201ENST00000296273 DLGAP2Q9P1A6 1054 aa11.7□□□□□ -0.54
RFC4-201ENST00000296273 R4GN57 208 aa11.7□□□□□ -0.54
RFC4-201ENST00000296273 PTPRZ1P23471 2315 aaPredicted RBP11.7□□□□□ -0.54
RFC4-201ENST00000296273 INO80B-WBP1J3KQ70 363 aa11.69□□□□□ -0.54
RFC4-201ENST00000296273 CCNT1O60563 726 aaKnown RBP11.69□□□□□ -0.54
RFC4-201ENST00000296273 ZMYND10O75800 440 aa11.69□□□□□ -0.54
RFC4-201ENST00000296273 DCNP07585 359 aaKnown RBP11.69□□□□□ -0.54
RFC4-201ENST00000296273 SPATA31D3P0C874 917 aa11.69□□□□□ -0.54
RFC4-201ENST00000296273 SP9P0CG40 484 aa11.69□□□□□ -0.54
RFC4-201ENST00000296273 DNM1Q05193 864 aaKnown RBP11.69□□□□□ -0.54
RFC4-201ENST00000296273 SPECC1Q5M775 1068 aa11.69□□□□□ -0.54
RFC4-201ENST00000296273 SPATA31D4Q6ZUB0 917 aa11.69□□□□□ -0.54
RFC4-201ENST00000296273 PJA1Q8NG27 643 aa11.69□□□□□ -0.54
RFC4-201ENST00000296273 CPB2Q96IY4 423 aa11.69□□□□□ -0.54
RFC4-201ENST00000296273 SPATA32Q96LK8 384 aa11.69□□□□□ -0.54
RFC4-201ENST00000296273 ZFP42Q96MM3 310 aa11.69□□□□□ -0.54
RFC4-201ENST00000296273 HINFPQ9BQA5 517 aa11.69□□□□□ -0.54
RFC4-201ENST00000296273 GPR62Q9BZJ7 368 aa11.69□□□□□ -0.54
RFC4-201ENST00000296273 BMP2KQ9NSY1 1161 aaPredicted RBP11.69□□□□□ -0.54
RFC4-201ENST00000296273 HES2Q9Y543 173 aa11.69□□□□□ -0.54
RFC4-201ENST00000296273 NUMBLQ9Y6R0 609 aa11.69□□□□□ -0.54
RFC4-201ENST00000296273 SF3B1O75533 1304 aaKnown RBP eCLIP11.69□□□□□ -0.542e-6■■■■■ 54
RFC4-201ENST00000296273 STK36Q9NRP7 1315 aa11.69□□□□□ -0.54
RFC4-201ENST00000296273 TADA2AO75478 443 aa11.68□□□□□ -0.54
RFC4-201ENST00000296273 DGAT1O75907 488 aa11.68□□□□□ -0.54
RFC4-201ENST00000296273 HNRNPA1P09651 372 aaKnown RBP eCLIP11.68□□□□□ -0.54
RFC4-201ENST00000296273 MYBP10242 640 aa11.68□□□□□ -0.54
RFC4-201ENST00000296273 ARF4P18085 180 aaPredicted RBP11.68□□□□□ -0.54
RFC4-201ENST00000296273 FSHRP23945 695 aa11.68□□□□□ -0.54
RFC4-201ENST00000296273 HOXA9P31269 272 aa11.68□□□□□ -0.54
RFC4-201ENST00000296273 PRKCQQ04759 706 aa11.68□□□□□ -0.54
RFC4-201ENST00000296273 MBTD1Q05BQ5 628 aa11.68□□□□□ -0.54
RFC4-201ENST00000296273 CCDC173Q0VFZ6 552 aa11.68□□□□□ -0.54
RFC4-201ENST00000296273 RESTQ13127 1097 aa11.68□□□□□ -0.54
RFC4-201ENST00000296273 UVSSAQ2YD98 709 aa11.68□□□□□ -0.54
RFC4-201ENST00000296273 NCAPH2Q6IBW4 605 aa11.68□□□□□ -0.54
RFC4-201ENST00000296273 SLC27A1Q6PCB7 646 aa11.68□□□□□ -0.54
RFC4-201ENST00000296273 MTSS1LQ765P7 747 aa11.68□□□□□ -0.54
RFC4-201ENST00000296273 KIAA2013Q8IYS2 634 aa11.68□□□□□ -0.54
RFC4-201ENST00000296273 GSTCDQ8NEC7 633 aa11.68□□□□□ -0.54
RFC4-201ENST00000296273 HAS1Q92839 578 aa11.68□□□□□ -0.54
RFC4-201ENST00000296273 DYDC2Q96IM9 177 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms