RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 CYP4A11Q02928 519 aa10.36□□□□□ -0.75
CNOT9-202ENST00000295701 EPHA7Q15375 998 aa10.36□□□□□ -0.75
CNOT9-202ENST00000295701 XKR9Q5GH70 373 aa10.36□□□□□ -0.75
CNOT9-202ENST00000295701 NCAPH2Q6IBW4 605 aa10.36□□□□□ -0.75
CNOT9-202ENST00000295701 CCDC149Q6ZUS6 474 aa10.36□□□□□ -0.75
CNOT9-202ENST00000295701 KRT25Q7Z3Z0 450 aa10.36□□□□□ -0.75
CNOT9-202ENST00000295701 SRGAP1Q7Z6B7 1085 aa10.36□□□□□ -0.75
CNOT9-202ENST00000295701 FERMT3Q86UX7 667 aa10.36□□□□□ -0.75
CNOT9-202ENST00000295701 PPFIBP1Q86W92 1011 aa10.36□□□□□ -0.75
CNOT9-202ENST00000295701 COLGALT2Q8IYK4 626 aa10.36□□□□□ -0.75
CNOT9-202ENST00000295701 CYP4X1Q8N118 509 aa10.36□□□□□ -0.75
CNOT9-202ENST00000295701 RNF149Q8NC42 400 aa10.36□□□□□ -0.75
CNOT9-202ENST00000295701 PSPC1Q8WXF1 523 aaKnown RBP10.36□□□□□ -0.75
CNOT9-202ENST00000295701 RABGGTAQ92696 567 aa10.36□□□□□ -0.75
CNOT9-202ENST00000295701 ACSF2Q96CM8 615 aaPredicted RBP10.36□□□□□ -0.75
CNOT9-202ENST00000295701 B3GALT6Q96L58 329 aa10.36□□□□□ -0.75
CNOT9-202ENST00000295701 FAM193BQ96PV7 902 aaPredicted RBP10.36□□□□□ -0.75
CNOT9-202ENST00000295701 GAD1Q99259 594 aa10.36□□□□□ -0.75
CNOT9-202ENST00000295701 JPH2Q9BR39 696 aaPredicted RBP10.36□□□□□ -0.75
CNOT9-202ENST00000295701 LXNQ9BS40 222 aa10.36□□□□□ -0.75
CNOT9-202ENST00000295701 TMEM175Q9BSA9 504 aa10.36□□□□□ -0.75
CNOT9-202ENST00000295701 PHF20Q9BVI0 1012 aa10.36□□□□□ -0.75
CNOT9-202ENST00000295701 APOL6Q9BWW8 343 aa10.36□□□□□ -0.75
CNOT9-202ENST00000295701 EMILIN2Q9BXX0 1053 aa10.36□□□□□ -0.75
CNOT9-202ENST00000295701 SFXN1Q9H9B4 322 aa10.36□□□□□ -0.75
CNOT9-202ENST00000295701 KCNK12Q9HB15 430 aa10.36□□□□□ -0.75
CNOT9-202ENST00000295701 XPNPEP1Q9NQW7 623 aa10.36□□□□□ -0.75
CNOT9-202ENST00000295701 MAN1C1Q9NR34 630 aa10.36□□□□□ -0.75
CNOT9-202ENST00000295701 MRPL17Q9NRX2 175 aaKnown RBP10.36□□□□□ -0.75
CNOT9-202ENST00000295701 CACNG4Q9UBN1 327 aa10.36□□□□□ -0.75
CNOT9-202ENST00000295701 IPPQ9Y573 584 aa10.36□□□□□ -0.75
CNOT9-202ENST00000295701 CYP46A1Q9Y6A2 500 aa10.36□□□□□ -0.75
CNOT9-202ENST00000295701 WDR87Q6ZQQ6 2873 aa10.36□□□□□ -0.75
CNOT9-202ENST00000295701 CCDC194A0A1B0GVG4 234 aa10.35□□□□□ -0.75
CNOT9-202ENST00000295701 ARL5CA6NH57 179 aa10.35□□□□□ -0.75
CNOT9-202ENST00000295701 TEX28O15482 410 aa10.35□□□□□ -0.75
CNOT9-202ENST00000295701 SOD2P04179 222 aa10.35□□□□□ -0.75
CNOT9-202ENST00000295701 ITGA4P13612 1032 aa10.35□□□□□ -0.75
CNOT9-202ENST00000295701 NCLP19338 710 aaKnown RBP10.35□□□□□ -0.75
CNOT9-202ENST00000295701 YWHABP31946 246 aaKnown RBP10.35□□□□□ -0.75
CNOT9-202ENST00000295701 MLH1P40692 756 aa10.35□□□□□ -0.75
CNOT9-202ENST00000295701 NBL1P41271 181 aa10.35□□□□□ -0.75
CNOT9-202ENST00000295701 SCNN1GP51170 649 aa10.35□□□□□ -0.75
CNOT9-202ENST00000295701 CLCN5P51795 746 aa10.35□□□□□ -0.75
CNOT9-202ENST00000295701 SCRN1Q12765 414 aa10.35□□□□□ -0.75
CNOT9-202ENST00000295701 TDGQ13569 410 aa10.35□□□□□ -0.75
CNOT9-202ENST00000295701 EMC2Q15006 297 aa10.35□□□□□ -0.75
CNOT9-202ENST00000295701 KIAA0319Q5VV43 1072 aa10.35□□□□□ -0.75
CNOT9-202ENST00000295701 PIK3AP1Q6ZUJ8 805 aa10.35□□□□□ -0.75
CNOT9-202ENST00000295701 OTOP3Q7RTS5 596 aa10.35□□□□□ -0.75
CNOT9-202ENST00000295701 NEK8Q86SG6 692 aa10.35□□□□□ -0.75
CNOT9-202ENST00000295701 CDR2LQ86X02 465 aaPredicted RBP10.35□□□□□ -0.75
CNOT9-202ENST00000295701 PALB2Q86YC2 1186 aa10.35□□□□□ -0.75
CNOT9-202ENST00000295701 GLYCTKQ8IVS8 523 aa10.35□□□□□ -0.75
CNOT9-202ENST00000295701 C4orf19Q8IY42 314 aa10.35□□□□□ -0.75
CNOT9-202ENST00000295701 SIX5Q8N196 739 aa10.35□□□□□ -0.75
CNOT9-202ENST00000295701 ASAP3Q8TDY4 903 aa10.35□□□□□ -0.75
CNOT9-202ENST00000295701 SLC7A3Q8WY07 619 aa10.35□□□□□ -0.75
CNOT9-202ENST00000295701 FAM20AQ96MK3 541 aa10.35□□□□□ -0.75
CNOT9-202ENST00000295701 ZFP42Q96MM3 310 aa10.35□□□□□ -0.75
CNOT9-202ENST00000295701 RPS6KC1Q96S38 1066 aa10.35□□□□□ -0.75
CNOT9-202ENST00000295701 MYADMQ96S97 322 aa10.35□□□□□ -0.75
CNOT9-202ENST00000295701 HERC2P3Q9BVR0 1158 aa10.35□□□□□ -0.75
CNOT9-202ENST00000295701 TOR4AQ9NXH8 423 aa10.35□□□□□ -0.75
CNOT9-202ENST00000295701 CNTNAP2Q9UHC6 1331 aa10.34□□□□□ -0.75
CNOT9-202ENST00000295701 KRBA1A5PL33 1030 aa10.34□□□□□ -0.75
CNOT9-202ENST00000295701 WNT7AO00755 349 aa10.34□□□□□ -0.75
CNOT9-202ENST00000295701 INPPL1O15357 1258 aa10.34□□□□□ -0.75
CNOT9-202ENST00000295701 TSPAN1O60635 241 aa10.34□□□□□ -0.75
CNOT9-202ENST00000295701 SLITRK3O94933 977 aa10.34□□□□□ -0.75
CNOT9-202ENST00000295701 REC8O95072 547 aa10.34□□□□□ -0.75
CNOT9-202ENST00000295701 CTDNEP1O95476 244 aa10.34□□□□□ -0.75
CNOT9-202ENST00000295701 EFEMP2O95967 443 aa10.34□□□□□ -0.75
CNOT9-202ENST00000295701 AOC1P19801 751 aa10.34□□□□□ -0.75
CNOT9-202ENST00000295701 AKAP5P24588 427 aa10.34□□□□□ -0.75
CNOT9-202ENST00000295701 GBP2P32456 591 aaPredicted RBP10.34□□□□□ -0.75
CNOT9-202ENST00000295701 RFC5P40937 340 aa10.34□□□□□ -0.75
CNOT9-202ENST00000295701 PTENP60484 403 aa10.34□□□□□ -0.75
CNOT9-202ENST00000295701 DSC1Q08554 894 aa10.34□□□□□ -0.75
CNOT9-202ENST00000295701 SPIRE1Q08AE8 756 aa10.34□□□□□ -0.75
CNOT9-202ENST00000295701 NR5A1Q13285 461 aa10.34□□□□□ -0.75
CNOT9-202ENST00000295701 PPP4R3AQ6IN85 833 aa10.34□□□□□ -0.75
CNOT9-202ENST00000295701 GALNT17Q6IS24 598 aa10.34□□□□□ -0.75
CNOT9-202ENST00000295701 TPH2Q8IWU9 490 aa10.34□□□□□ -0.75
CNOT9-202ENST00000295701 RNF168Q8IYW5 571 aaPredicted RBP10.34□□□□□ -0.75
CNOT9-202ENST00000295701 SPIRE2Q8WWL2 714 aa10.34□□□□□ -0.75
CNOT9-202ENST00000295701 RSPH1Q8WYR4 309 aa10.34□□□□□ -0.75
CNOT9-202ENST00000295701 GPR62Q9BZJ7 368 aa10.34□□□□□ -0.75
CNOT9-202ENST00000295701 PDRG1Q9NUG6 133 aa10.34□□□□□ -0.75
CNOT9-202ENST00000295701 KLK14Q9P0G3 267 aa10.34□□□□□ -0.75
CNOT9-202ENST00000295701 KANSL3Q9P2N6 904 aa10.34□□□□□ -0.75
CNOT9-202ENST00000295701 FBXL21Q9UKT6 434 aa10.34□□□□□ -0.75
CNOT9-202ENST00000295701 DUSP12Q9UNI6 340 aa10.34□□□□□ -0.75
CNOT9-202ENST00000295701 NOTCH4Q99466 2003 aa10.33□□□□□ -0.76
CNOT9-202ENST00000295701 EP300Q09472 2414 aaPredicted RBP10.33□□□□□ -0.76
CNOT9-202ENST00000295701 CARNS1A5YM72 827 aa10.33□□□□□ -0.76
CNOT9-202ENST00000295701 INO80B-WBP1J3KQ70 363 aa10.33□□□□□ -0.76
CNOT9-202ENST00000295701 ASAP2O43150 1006 aa10.33□□□□□ -0.76
CNOT9-202ENST00000295701 B4GALT5O43286 388 aa10.33□□□□□ -0.76
CNOT9-202ENST00000295701 MARCH6O60337 910 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms