RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 ZNF564Q8TBZ8 553 aaPredicted RBP10.96□□□□□ -0.65
LMX1A-201ENST00000294816 GRAMD1AQ96CP6 724 aa10.96□□□□□ -0.65
LMX1A-201ENST00000294816 SNF8Q96H20 258 aa10.96□□□□□ -0.65
LMX1A-201ENST00000294816 HEMGNQ9BXL5 484 aa10.96□□□□□ -0.65
LMX1A-201ENST00000294816 PCIF1Q9H4Z3 704 aa10.96□□□□□ -0.65
LMX1A-201ENST00000294816 CHST7Q9NS84 486 aa10.96□□□□□ -0.65
LMX1A-201ENST00000294816 RABGAP1Q9Y3P9 1069 aa10.96□□□□□ -0.65
LMX1A-201ENST00000294816 PCDHA3Q9Y5H8 950 aa10.96□□□□□ -0.65
LMX1A-201ENST00000294816 RREB1Q92766 1687 aa10.96□□□□□ -0.65
LMX1A-201ENST00000294816 FAM47DPA6NHR8 397 aa10.96□□□□□ -0.66
LMX1A-201ENST00000294816 TGFB1I1O43294 461 aa10.96□□□□□ -0.66
LMX1A-201ENST00000294816 ATP5HO75947 161 aa10.96□□□□□ -0.66
LMX1A-201ENST00000294816 BCRP11274 1271 aa10.96□□□□□ -0.66
LMX1A-201ENST00000294816 SKIV2L2P42285 1042 aaKnown RBP10.96□□□□□ -0.66
LMX1A-201ENST00000294816 SSR1P43307 286 aaKnown RBP10.96□□□□□ -0.66
LMX1A-201ENST00000294816 TAF1BQ53T94 588 aaPredicted RBP10.96□□□□□ -0.66
LMX1A-201ENST00000294816 PHLDB3Q6NSJ2 640 aa10.96□□□□□ -0.66
LMX1A-201ENST00000294816 SYT2Q8N9I0 419 aaPredicted RBP10.96□□□□□ -0.66
LMX1A-201ENST00000294816 WNT8AQ9H1J5 351 aa10.96□□□□□ -0.66
LMX1A-201ENST00000294816 ZFP69BQ9UJL9 534 aa10.96□□□□□ -0.66
LMX1A-201ENST00000294816 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.96□□□□□ -0.66
LMX1A-201ENST00000294816 CDH16O75309 829 aa10.96□□□□□ -0.66
LMX1A-201ENST00000294816 GGPS1O95749 300 aa10.96□□□□□ -0.66
LMX1A-201ENST00000294816 ALAS1P13196 640 aa10.96□□□□□ -0.66
LMX1A-201ENST00000294816 CHRNB2P17787 502 aa10.96□□□□□ -0.66
LMX1A-201ENST00000294816 RASSF2P50749 326 aa10.96□□□□□ -0.66
LMX1A-201ENST00000294816 CCNG1P51959 295 aa10.96□□□□□ -0.66
LMX1A-201ENST00000294816 WDR4P57081 412 aaKnown RBP10.96□□□□□ -0.66
LMX1A-201ENST00000294816 IKQ13123 557 aaPredicted RBP10.96□□□□□ -0.66
LMX1A-201ENST00000294816 RCN1Q15293 331 aa10.96□□□□□ -0.66
LMX1A-201ENST00000294816 SEPT7Q16181 437 aaKnown RBP10.96□□□□□ -0.66
LMX1A-201ENST00000294816 PARP6Q2NL67 630 aa10.96□□□□□ -0.66
LMX1A-201ENST00000294816 ZFYVE27Q5T4F4 411 aa10.96□□□□□ -0.66
LMX1A-201ENST00000294816 HHATQ5VTY9 493 aa10.96□□□□□ -0.66
LMX1A-201ENST00000294816 RFWD3Q6PCD5 774 aa10.96□□□□□ -0.66
LMX1A-201ENST00000294816 NBPF5PQ86XG9 351 aaPredicted RBP10.96□□□□□ -0.66
LMX1A-201ENST00000294816 TPH2Q8IWU9 490 aa10.96□□□□□ -0.66
LMX1A-201ENST00000294816 OLIG1Q8TAK6 271 aa10.96□□□□□ -0.66
LMX1A-201ENST00000294816 ASAP3Q8TDY4 903 aa10.96□□□□□ -0.66
LMX1A-201ENST00000294816 NPHS2Q9NP85 383 aa10.96□□□□□ -0.66
LMX1A-201ENST00000294816 NMRK1Q9NWW6 199 aa10.96□□□□□ -0.66
LMX1A-201ENST00000294816 PCDHA1Q9Y5I3 950 aa10.96□□□□□ -0.66
LMX1A-201ENST00000294816 EXOC1LA0A1B0GW35 172 aa10.95□□□□□ -0.66
LMX1A-201ENST00000294816 GTPBP10A4D1E9 387 aaKnown RBP10.95□□□□□ -0.66
LMX1A-201ENST00000294816 FAM196BA6NMK8 535 aa10.95□□□□□ -0.66
LMX1A-201ENST00000294816 DCTN3O75935 186 aa10.95□□□□□ -0.66
LMX1A-201ENST00000294816 GAS8O95995 478 aa10.95□□□□□ -0.66
LMX1A-201ENST00000294816 CA4P22748 312 aa10.95□□□□□ -0.66
LMX1A-201ENST00000294816 SMARCA1P28370 1054 aa10.95□□□□□ -0.66
LMX1A-201ENST00000294816 LAMB3Q13751 1172 aa10.95□□□□□ -0.66
LMX1A-201ENST00000294816 C11orf63Q6NUN7 778 aa10.95□□□□□ -0.66
LMX1A-201ENST00000294816 ZNF365Q70YC5 407 aa10.95□□□□□ -0.66
LMX1A-201ENST00000294816 GSTA5Q7RTV2 222 aa10.95□□□□□ -0.66
LMX1A-201ENST00000294816 SLFN12Q8IYM2 578 aa10.95□□□□□ -0.66
LMX1A-201ENST00000294816 FGD4Q96M96 766 aa10.95□□□□□ -0.66
LMX1A-201ENST00000294816 ANKRD27Q96NW4 1050 aa10.95□□□□□ -0.66
LMX1A-201ENST00000294816 UBN1Q9NPG3 1134 aa10.95□□□□□ -0.66
LMX1A-201ENST00000294816 MTMR4Q9NYA4 1195 aa10.95□□□□□ -0.66
LMX1A-201ENST00000294816 STOML1Q9UBI4 398 aa10.95□□□□□ -0.66
LMX1A-201ENST00000294816 SNED1Q8TER0 1413 aa10.95□□□□□ -0.66
LMX1A-201ENST00000294816 A0A1B0GVG6 124 aa10.95□□□□□ -0.66
LMX1A-201ENST00000294816 UBAP1LF5GYI3 381 aa10.95□□□□□ -0.66
LMX1A-201ENST00000294816 KCNA3P22001 575 aa10.95□□□□□ -0.66
LMX1A-201ENST00000294816 POLD1P28340 1107 aa10.95□□□□□ -0.66
LMX1A-201ENST00000294816 RANBP1P43487 201 aa10.95□□□□□ -0.66
LMX1A-201ENST00000294816 CDR2Q01850 454 aa10.95□□□□□ -0.66
LMX1A-201ENST00000294816 USH1GQ495M9 461 aa10.95□□□□□ -0.66
LMX1A-201ENST00000294816 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.95□□□□□ -0.66
LMX1A-201ENST00000294816 SPIRE2Q8WWL2 714 aa10.95□□□□□ -0.66
LMX1A-201ENST00000294816 KAT5Q92993 513 aa10.95□□□□□ -0.66
LMX1A-201ENST00000294816 GPR88Q9GZN0 384 aa10.95□□□□□ -0.66
LMX1A-201ENST00000294816 ROBO3Q96MS0 1386 aa10.95□□□□□ -0.66
LMX1A-201ENST00000294816 IRF6O14896 467 aa10.94□□□□□ -0.66
LMX1A-201ENST00000294816 ATP9AO75110 1047 aa10.94□□□□□ -0.66
LMX1A-201ENST00000294816 SGPL1O95470 568 aa10.94□□□□□ -0.66
LMX1A-201ENST00000294816 ITIH2P19823 946 aa10.94□□□□□ -0.66
LMX1A-201ENST00000294816 GCLMP48507 274 aa10.94□□□□□ -0.66
LMX1A-201ENST00000294816 ZBTB16Q05516 673 aa10.94□□□□□ -0.66
LMX1A-201ENST00000294816 SPARCL1Q14515 664 aa10.94□□□□□ -0.66
LMX1A-201ENST00000294816 KHDC1Q4VXA5 237 aaKnown RBP10.94□□□□□ -0.66
LMX1A-201ENST00000294816 TRMT1LQ7Z2T5 733 aaKnown RBP10.94□□□□□ -0.66
LMX1A-201ENST00000294816 ARHGEF19Q8IW93 802 aa10.94□□□□□ -0.66
LMX1A-201ENST00000294816 RBBP8NLQ8NC74 664 aaPredicted RBP10.94□□□□□ -0.66
LMX1A-201ENST00000294816 RPGRQ92834 1020 aaKnown RBP10.94□□□□□ -0.66
LMX1A-201ENST00000294816 MCUR1Q96AQ8 359 aa10.94□□□□□ -0.66
LMX1A-201ENST00000294816 GBP5Q96PP8 586 aa10.94□□□□□ -0.66
LMX1A-201ENST00000294816 WHRNQ9P202 907 aa10.94□□□□□ -0.66
LMX1A-201ENST00000294816 LAMB1P07942 1786 aa10.94□□□□□ -0.66
LMX1A-201ENST00000294816 ZBTB39O15060 712 aa10.94□□□□□ -0.66
LMX1A-201ENST00000294816 ZBTB5O15062 677 aa10.94□□□□□ -0.66
LMX1A-201ENST00000294816 KRT36O76013 467 aa10.94□□□□□ -0.66
LMX1A-201ENST00000294816 NPTXRO95502 500 aa10.94□□□□□ -0.66
LMX1A-201ENST00000294816 UBTFL6P0CB48 400 aaPredicted RBP10.94□□□□□ -0.66
LMX1A-201ENST00000294816 TAL1P17542 331 aaPredicted RBP10.94□□□□□ -0.66
LMX1A-201ENST00000294816 MARK3P27448 753 aa10.94□□□□□ -0.66
LMX1A-201ENST00000294816 CNGA1P29973 690 aa10.94□□□□□ -0.66
LMX1A-201ENST00000294816 ARHGAP4P98171 946 aa10.94□□□□□ -0.66
LMX1A-201ENST00000294816 ZNF543Q08ER8 600 aa10.94□□□□□ -0.66
LMX1A-201ENST00000294816 OVGP1Q12889 678 aa10.94□□□□□ -0.66
LMX1A-201ENST00000294816 TBC1D10BQ4KMP7 808 aaPredicted RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms