RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 GRIN2DO15399 1336 aa16.98■□□□□ 0.31
NCKIPSD-201ENST00000294129 SHOX2O60902 331 aaPredicted RBP16.98■□□□□ 0.31
NCKIPSD-201ENST00000294129 PYGMP11217 842 aa16.98■□□□□ 0.31
NCKIPSD-201ENST00000294129 DSG3P32926 999 aa16.98■□□□□ 0.31
NCKIPSD-201ENST00000294129 ZBTB45Q96K62 511 aaPredicted RBP16.98■□□□□ 0.31
NCKIPSD-201ENST00000294129 GGA3Q9NZ52 723 aa16.98■□□□□ 0.31
NCKIPSD-201ENST00000294129 ZNF541Q9H0D2 1346 aa16.98■□□□□ 0.31
NCKIPSD-201ENST00000294129 KCNJ1P48048 391 aa16.98■□□□□ 0.31
NCKIPSD-201ENST00000294129 WNT7BP56706 349 aa16.98■□□□□ 0.31
NCKIPSD-201ENST00000294129 PTENP60484 403 aa16.98■□□□□ 0.31
NCKIPSD-201ENST00000294129 PASD1Q8IV76 773 aa16.98■□□□□ 0.31
NCKIPSD-201ENST00000294129 GPD1LQ8N335 351 aa16.98■□□□□ 0.31
NCKIPSD-201ENST00000294129 FMO2Q99518 471 aa16.98■□□□□ 0.31
NCKIPSD-201ENST00000294129 ZSWIM1Q9BR11 485 aa16.98■□□□□ 0.31
NCKIPSD-201ENST00000294129 TIPINQ9BVW5 301 aa16.98■□□□□ 0.31
NCKIPSD-201ENST00000294129 TEX13BQ9BXU2 312 aa16.98■□□□□ 0.31
NCKIPSD-201ENST00000294129 ATP6V0A4Q9HBG4 840 aa16.98■□□□□ 0.31
NCKIPSD-201ENST00000294129 IFFO1Q0D2I5 559 aa16.97■□□□□ 0.31
NCKIPSD-201ENST00000294129 SEL1L2Q5TEA6 688 aa16.97■□□□□ 0.31
NCKIPSD-201ENST00000294129 TAS1R3Q7RTX0 852 aa16.97■□□□□ 0.31
NCKIPSD-201ENST00000294129 CPA5Q8WXQ8 436 aa16.97■□□□□ 0.31
NCKIPSD-201ENST00000294129 FNBP1Q96RU3 617 aa16.97■□□□□ 0.31
NCKIPSD-201ENST00000294129 ACAD9Q9H845 621 aa16.97■□□□□ 0.31
NCKIPSD-201ENST00000294129 TGFB2P61812 414 aa16.97■□□□□ 0.31
NCKIPSD-201ENST00000294129 ZNF844Q08AG5 666 aa16.97■□□□□ 0.31
NCKIPSD-201ENST00000294129 TMC3Q7Z5M5 1100 aa16.97■□□□□ 0.31
NCKIPSD-201ENST00000294129 JAMLQ86YT9 394 aa16.97■□□□□ 0.31
NCKIPSD-201ENST00000294129 ZDHHC14Q8IZN3 488 aa16.97■□□□□ 0.31
NCKIPSD-201ENST00000294129 ANKRD35Q8N283 1001 aa16.97■□□□□ 0.31
NCKIPSD-201ENST00000294129 REPS2Q8NFH8 660 aa16.97■□□□□ 0.31
NCKIPSD-201ENST00000294129 NAP1L3Q99457 506 aaPredicted RBP16.97■□□□□ 0.31
NCKIPSD-201ENST00000294129 CNOT8Q9UFF9 292 aaKnown RBP16.97■□□□□ 0.31
NCKIPSD-201ENST00000294129 WDR81Q562E7 1941 aa16.97■□□□□ 0.31
NCKIPSD-201ENST00000294129 ATP8B3O60423 1300 aa16.97■□□□□ 0.31
NCKIPSD-201ENST00000294129 NDUFAB1O14561 156 aa16.96■□□□□ 0.31
NCKIPSD-201ENST00000294129 DGAT1O75907 488 aa16.96■□□□□ 0.31
NCKIPSD-201ENST00000294129 RPS12P25398 132 aaKnown RBP16.96■□□□□ 0.31
NCKIPSD-201ENST00000294129 NLRP11P59045 1033 aaKnown RBP16.96■□□□□ 0.31
NCKIPSD-201ENST00000294129 KRT71Q3SY84 523 aa16.96■□□□□ 0.31
NCKIPSD-201ENST00000294129 ZBTB41Q5SVQ8 909 aa16.96■□□□□ 0.31
NCKIPSD-201ENST00000294129 RAB17Q9H0T7 212 aa16.96■□□□□ 0.31
NCKIPSD-201ENST00000294129 C1orf112Q9NSG2 853 aa16.96■□□□□ 0.31
NCKIPSD-201ENST00000294129 STBD1O95210 358 aa16.96■□□□□ 0.31
NCKIPSD-201ENST00000294129 SEC24CP53992 1094 aa16.96■□□□□ 0.31
NCKIPSD-201ENST00000294129 POU5F1Q01860 360 aaKnown RBP16.96■□□□□ 0.31
NCKIPSD-201ENST00000294129 SNX1Q13596 522 aa16.96■□□□□ 0.31
NCKIPSD-201ENST00000294129 ATP8B4Q8TF62 1192 aa16.96■□□□□ 0.31
NCKIPSD-201ENST00000294129 SLC16A10Q8TF71 515 aa16.96■□□□□ 0.31
NCKIPSD-201ENST00000294129 CNKSR2Q8WXI2 1034 aa16.96■□□□□ 0.31
NCKIPSD-201ENST00000294129 ZNF516Q92618 1163 aa16.96■□□□□ 0.31
NCKIPSD-201ENST00000294129 DCDC2CA8MYV0 355 aa16.95■□□□□ 0.3
NCKIPSD-201ENST00000294129 GJC1P36383 396 aa16.95■□□□□ 0.3
NCKIPSD-201ENST00000294129 GPC3P51654 580 aa16.95■□□□□ 0.3
NCKIPSD-201ENST00000294129 CDR2Q01850 454 aa16.95■□□□□ 0.3
NCKIPSD-201ENST00000294129 EMC2Q15006 297 aa16.95■□□□□ 0.3
NCKIPSD-201ENST00000294129 GNPTABQ3T906 1256 aa16.95■□□□□ 0.3
NCKIPSD-201ENST00000294129 CCDC105Q8IYK2 499 aa16.95■□□□□ 0.3
NCKIPSD-201ENST00000294129 PRELID2Q8N945 189 aa16.95■□□□□ 0.3
NCKIPSD-201ENST00000294129 MCPH1Q8NEM0 835 aa16.95■□□□□ 0.3
NCKIPSD-201ENST00000294129 ERP44Q9BS26 406 aa16.95■□□□□ 0.3
NCKIPSD-201ENST00000294129 PPANQ9NQ55 473 aaKnown RBP16.95■□□□□ 0.3
NCKIPSD-201ENST00000294129 FAM114A2Q9NRY5 505 aa16.95■□□□□ 0.3
NCKIPSD-201ENST00000294129 ANAPC7Q9UJX3 599 aa16.95■□□□□ 0.3
NCKIPSD-201ENST00000294129 SYNGAP1Q96PV0 1343 aa16.95■□□□□ 0.3
NCKIPSD-201ENST00000294129 TLDC2A0PJX2 215 aa16.95■□□□□ 0.3
NCKIPSD-201ENST00000294129 MYO1FO00160 1098 aa16.95■□□□□ 0.3
NCKIPSD-201ENST00000294129 PIK3CAP42336 1068 aa16.95■□□□□ 0.3
NCKIPSD-201ENST00000294129 C11orf63Q6NUN7 778 aa16.95■□□□□ 0.3
NCKIPSD-201ENST00000294129 TTC27Q6P3X3 843 aa16.95■□□□□ 0.3
NCKIPSD-201ENST00000294129 SLC17A8Q8NDX2 589 aa16.95■□□□□ 0.3
NCKIPSD-201ENST00000294129 FBXO25Q8TCJ0 367 aa16.95■□□□□ 0.3
NCKIPSD-201ENST00000294129 TMBIM4Q9HC24 238 aa16.95■□□□□ 0.3
NCKIPSD-201ENST00000294129 NOVA2Q9UNW9 492 aaKnown RBP16.95■□□□□ 0.3
NCKIPSD-201ENST00000294129 RGPD3A6NKT7 1758 aaPredicted RBP16.95■□□□□ 0.3
NCKIPSD-201ENST00000294129 RGPD4Q7Z3J3 1758 aa16.95■□□□□ 0.3
NCKIPSD-201ENST00000294129 STRN3Q13033 797 aa16.95■□□□□ 0.3
NCKIPSD-201ENST00000294129 MIS18BP1Q6P0N0 1132 aa16.95■□□□□ 0.3
NCKIPSD-201ENST00000294129 SPIRE2Q8WWL2 714 aa16.95■□□□□ 0.3
NCKIPSD-201ENST00000294129 ZNF668Q96K58 619 aaPredicted RBP16.95■□□□□ 0.3
NCKIPSD-201ENST00000294129 MFSD14AQ96MC6 490 aa16.95■□□□□ 0.3
NCKIPSD-201ENST00000294129 MIF4GDA9UHW6 222 aaKnown RBP16.94■□□□□ 0.3
NCKIPSD-201ENST00000294129 MAPK13O15264 365 aa16.94■□□□□ 0.3
NCKIPSD-201ENST00000294129 CLDN3O15551 220 aa16.94■□□□□ 0.3
NCKIPSD-201ENST00000294129 TMOD1P28289 359 aa16.94■□□□□ 0.3
NCKIPSD-201ENST00000294129 CCDC137Q6PK04 289 aaKnown RBP16.94■□□□□ 0.3
NCKIPSD-201ENST00000294129 ABHD15Q6UXT9 468 aa16.94■□□□□ 0.3
NCKIPSD-201ENST00000294129 USP37Q86T82 979 aa16.94■□□□□ 0.3
NCKIPSD-201ENST00000294129 CCDC25Q86WR0 208 aa16.94■□□□□ 0.3
NCKIPSD-201ENST00000294129 FAM212AQ96EL1 285 aa16.94■□□□□ 0.3
NCKIPSD-201ENST00000294129 TARS2Q9BW92 718 aaKnown RBP16.94■□□□□ 0.3
NCKIPSD-201ENST00000294129 TTC7AQ9ULT0 858 aaPredicted RBP16.94■□□□□ 0.3
NCKIPSD-201ENST00000294129 PTPRJQ12913 1337 aa16.94■□□□□ 0.3
NCKIPSD-201ENST00000294129 ZNFX1Q9P2E3 1918 aaKnown RBP16.94■□□□□ 0.3
NCKIPSD-201ENST00000294129 SPDYE16A6NNV3 312 aaPredicted RBP16.94■□□□□ 0.3
NCKIPSD-201ENST00000294129 H0YGN5 161 aa16.94■□□□□ 0.3
NCKIPSD-201ENST00000294129 LSP1P33241 339 aa16.94■□□□□ 0.3
NCKIPSD-201ENST00000294129 NF2P35240 595 aa16.94■□□□□ 0.3
NCKIPSD-201ENST00000294129 SSR1P43307 286 aaKnown RBP16.94■□□□□ 0.3
NCKIPSD-201ENST00000294129 SNRPFP62306 86 aaKnown RBP16.94■□□□□ 0.3
NCKIPSD-201ENST00000294129 UBAP2Q5T6F2 1119 aaKnown RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms