RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 KIF22Q14807 665 aa15.73■□□□□ 0.11
CCNF-201ENST00000293968 C11orf63Q6NUN7 778 aa15.73■□□□□ 0.11
CCNF-201ENST00000293968 TRMT10CQ7L0Y3 403 aaKnown RBP15.73■□□□□ 0.11
CCNF-201ENST00000293968 CTNNA2P26232 953 aa15.73■□□□□ 0.11
CCNF-201ENST00000293968 DDTLA6NHG4 134 aaPredicted RBP15.72■□□□□ 0.11
CCNF-201ENST00000293968 GH2P01242 217 aa15.72■□□□□ 0.11
CCNF-201ENST00000293968 PRELPP51888 382 aa15.72■□□□□ 0.11
CCNF-201ENST00000293968 SESN3P58005 492 aa15.72■□□□□ 0.11
CCNF-201ENST00000293968 PADI6Q6TGC4 694 aa15.72■□□□□ 0.11
CCNF-201ENST00000293968 ARHGEF18Q6ZSZ5 1173 aa15.72■□□□□ 0.11
CCNF-201ENST00000293968 TAB3Q8N5C8 712 aaPredicted RBP15.72■□□□□ 0.11
CCNF-201ENST00000293968 GBP7Q8N8V2 638 aaPredicted RBP15.72■□□□□ 0.11
CCNF-201ENST00000293968 TMEM237Q96Q45 408 aa15.72■□□□□ 0.11
CCNF-201ENST00000293968 WDR18Q9BV38 432 aa15.72■□□□□ 0.11
CCNF-201ENST00000293968 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.72■□□□□ 0.11
CCNF-201ENST00000293968 RASA3Q14644 834 aa15.72■□□□□ 0.11
CCNF-201ENST00000293968 KAZNQ674X7 775 aa15.72■□□□□ 0.11
CCNF-201ENST00000293968 MOXD1Q6UVY6 613 aa15.72■□□□□ 0.11
CCNF-201ENST00000293968 DHX38Q92620 1227 aaKnown RBP15.72■□□□□ 0.11
CCNF-201ENST00000293968 SNF8Q96H20 258 aa15.72■□□□□ 0.11
CCNF-201ENST00000293968 FAM84AQ96KN4 292 aa15.72■□□□□ 0.11
CCNF-201ENST00000293968 LARSQ9P2J5 1176 aaKnown RBP15.72■□□□□ 0.11
CCNF-201ENST00000293968 ATP2A2P16615 1042 aaKnown RBP15.72■□□□□ 0.11
CCNF-201ENST00000293968 ZNF131P52739 623 aa15.72■□□□□ 0.11
CCNF-201ENST00000293968 DNAJC3Q13217 504 aa15.72■□□□□ 0.11
CCNF-201ENST00000293968 SEPT7Q16181 437 aaKnown RBP15.72■□□□□ 0.11
CCNF-201ENST00000293968 OTOP1Q7RTM1 612 aa15.72■□□□□ 0.11
CCNF-201ENST00000293968 ERP27Q96DN0 273 aa15.72■□□□□ 0.11
CCNF-201ENST00000293968 YIPF3Q9GZM5 350 aa15.72■□□□□ 0.11
CCNF-201ENST00000293968 TARSP26639 723 aaKnown RBP15.72■□□□□ 0.11
CCNF-201ENST00000293968 PSEN1P49768 467 aa15.72■□□□□ 0.11
CCNF-201ENST00000293968 CYFIP1Q7L576 1253 aa15.72■□□□□ 0.11
CCNF-201ENST00000293968 ROPN1BQ9BZX4 212 aaPredicted RBP15.72■□□□□ 0.11
CCNF-201ENST00000293968 ROPN1Q9HAT0 212 aaPredicted RBP15.72■□□□□ 0.11
CCNF-201ENST00000293968 BBOX1O75936 387 aa15.71■□□□□ 0.11
CCNF-201ENST00000293968 GGPS1O95749 300 aa15.71■□□□□ 0.11
CCNF-201ENST00000293968 CCND1P24385 295 aa15.71■□□□□ 0.11
CCNF-201ENST00000293968 RNASELQ05823 741 aaKnown RBP15.71■□□□□ 0.11
CCNF-201ENST00000293968 RC3H1Q5TC82 1133 aaKnown RBP15.71■□□□□ 0.11
CCNF-201ENST00000293968 CYP4X1Q8N118 509 aa15.71■□□□□ 0.11
CCNF-201ENST00000293968 RPS6KC1Q96S38 1066 aa15.71■□□□□ 0.11
CCNF-201ENST00000293968 KLHL11Q9NVR0 708 aa15.71■□□□□ 0.11
CCNF-201ENST00000293968 ENO4A6NNW6 628 aa15.71■□□□□ 0.11
CCNF-201ENST00000293968 PEX5P50542 639 aa15.71■□□□□ 0.11
CCNF-201ENST00000293968 IL9RQ01113 521 aa15.71■□□□□ 0.11
CCNF-201ENST00000293968 VSTM1Q6UX27 236 aa15.71■□□□□ 0.11
CCNF-201ENST00000293968 SERPINB12Q96P63 405 aa15.71■□□□□ 0.11
CCNF-201ENST00000293968 HSD17B14Q9BPX1 270 aa15.71■□□□□ 0.11
CCNF-201ENST00000293968 VPS37BQ9H9H4 285 aa15.71■□□□□ 0.11
CCNF-201ENST00000293968 WRAP73Q9P2S5 460 aaPredicted RBP15.71■□□□□ 0.11
CCNF-201ENST00000293968 NAV1Q8NEY1 1877 aa15.71■□□□□ 0.11
CCNF-201ENST00000293968 WDR91A4D1P6 747 aa15.71■□□□□ 0.1
CCNF-201ENST00000293968 SLC16A4O15374 487 aa15.71■□□□□ 0.1
CCNF-201ENST00000293968 SLC26A4O43511 780 aa15.71■□□□□ 0.1
CCNF-201ENST00000293968 POLR2MP0CAP2 368 aa15.71■□□□□ 0.1
CCNF-201ENST00000293968 ARP10275 920 aa15.71■□□□□ 0.1
CCNF-201ENST00000293968 NEFHP12036 1026 aa15.71■□□□□ 0.1
CCNF-201ENST00000293968 STRN3Q13033 797 aa15.71■□□□□ 0.1
CCNF-201ENST00000293968 MPP2Q14168 576 aa15.71■□□□□ 0.1
CCNF-201ENST00000293968 LLGL2Q6P1M3 1020 aa15.71■□□□□ 0.1
CCNF-201ENST00000293968 BZW1Q7L1Q6 419 aaKnown RBP15.71■□□□□ 0.1
CCNF-201ENST00000293968 MIER3Q7Z3K6 550 aa15.71■□□□□ 0.1
CCNF-201ENST00000293968 EPS8L1Q8TE68 723 aa15.71■□□□□ 0.1
CCNF-201ENST00000293968 TUFT1Q9NNX1 390 aa15.71■□□□□ 0.1
CCNF-201ENST00000293968 TTC4O95801 387 aa15.7■□□□□ 0.1
CCNF-201ENST00000293968 PDHA1P08559 390 aa15.7■□□□□ 0.1
CCNF-201ENST00000293968 CRKP46108 304 aa15.7■□□□□ 0.1
CCNF-201ENST00000293968 MFAP3P55082 362 aa15.7■□□□□ 0.1
CCNF-201ENST00000293968 CAPRIN2Q6IMN6 1127 aaKnown RBP15.7■□□□□ 0.1
CCNF-201ENST00000293968 TLDC1Q6P9B6 456 aa15.7■□□□□ 0.1
CCNF-201ENST00000293968 XXYLT1Q8NBI6 393 aa15.7■□□□□ 0.1
CCNF-201ENST00000293968 SLC5A5Q92911 643 aa15.7■□□□□ 0.1
CCNF-201ENST00000293968 UNC45AQ9H3U1 944 aa15.7■□□□□ 0.1
CCNF-201ENST00000293968 HSPBP1Q9NZL4 362 aa15.7■□□□□ 0.1
CCNF-201ENST00000293968 NAALADL1Q9UQQ1 740 aa15.7■□□□□ 0.1
CCNF-201ENST00000293968 TMEM150BA6NC51 233 aa15.7■□□□□ 0.1
CCNF-201ENST00000293968 PPEF1O14829 653 aaPredicted RBP15.7■□□□□ 0.1
CCNF-201ENST00000293968 MYBL1P10243 752 aa15.7■□□□□ 0.1
CCNF-201ENST00000293968 CRELD2Q6UXH1 353 aaPredicted RBP15.7■□□□□ 0.1
CCNF-201ENST00000293968 C4orf33Q8N1A6 199 aa15.7■□□□□ 0.1
CCNF-201ENST00000293968 MBOAT7Q96N66 472 aa15.7■□□□□ 0.1
CCNF-201ENST00000293968 TEKT3Q9BXF9 490 aa15.7■□□□□ 0.1
CCNF-201ENST00000293968 KCNQ5Q9NR82 932 aa15.7■□□□□ 0.1
CCNF-201ENST00000293968 PI4KBQ9UBF8 816 aa15.7■□□□□ 0.1
CCNF-201ENST00000293968 HAO1Q9UJM8 370 aa15.7■□□□□ 0.1
CCNF-201ENST00000293968 PLIN4Q96Q06 1357 aa15.7■□□□□ 0.1
CCNF-201ENST00000293968 EXOC1LA0A1B0GW35 172 aa15.7■□□□□ 0.1
CCNF-201ENST00000293968 PEX3P56589 373 aa15.7■□□□□ 0.1
CCNF-201ENST00000293968 OLIG1Q8TAK6 271 aa15.7■□□□□ 0.1
CCNF-201ENST00000293968 CPA5Q8WXQ8 436 aa15.7■□□□□ 0.1
CCNF-201ENST00000293968 RXFP1Q9HBX9 757 aa15.7■□□□□ 0.1
CCNF-201ENST00000293968 DDX60LQ5H9U9 1706 aaKnown RBP15.69■□□□□ 0.1
CCNF-201ENST00000293968 PLCB3Q01970 1234 aa15.69■□□□□ 0.1
CCNF-201ENST00000293968 ZNF268Q14587 947 aaPredicted RBP15.69■□□□□ 0.1
CCNF-201ENST00000293968 CKAP2Q8WWK9 683 aa15.69■□□□□ 0.1
CCNF-201ENST00000293968 KIFAP3Q92845 792 aa15.69■□□□□ 0.1
CCNF-201ENST00000293968 PI4K2AQ9BTU6 479 aa15.69■□□□□ 0.1
CCNF-201ENST00000293968 TOPORSQ9NS56 1045 aaPredicted RBP15.69■□□□□ 0.1
CCNF-201ENST00000293968 SEL1LQ9UBV2 794 aa15.69■□□□□ 0.1
CCNF-201ENST00000293968 PRR12Q9ULL5 1215 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms