RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 CPA2P48052 419 aa16.23■□□□□ 0.19
SHROOM4-201ENST00000289292 TSSK1BQ9BXA7 367 aa16.23■□□□□ 0.19
SHROOM4-201ENST00000289292 GPSM2P81274 684 aa16.23■□□□□ 0.19
SHROOM4-201ENST00000289292 PIK3R5Q8WYR1 880 aa16.23■□□□□ 0.19
SHROOM4-201ENST00000289292 APEX2Q9UBZ4 518 aa16.23■□□□□ 0.19
SHROOM4-201ENST00000289292 E2F6O75461 281 aa16.23■□□□□ 0.19
SHROOM4-201ENST00000289292 DEUP1Q05D60 604 aa16.23■□□□□ 0.19
SHROOM4-201ENST00000289292 HIC1Q14526 733 aa16.23■□□□□ 0.19
SHROOM4-201ENST00000289292 EFTUD2Q15029 972 aaKnown RBP eCLIP16.23■□□□□ 0.19
SHROOM4-201ENST00000289292 GRAMD1AQ96CP6 724 aa16.23■□□□□ 0.19
SHROOM4-201ENST00000289292 TRIM33Q9UPN9 1127 aa16.23■□□□□ 0.19
SHROOM4-201ENST00000289292 PNPLA7Q6ZV29 1317 aa16.23■□□□□ 0.19
SHROOM4-201ENST00000289292 RNF103-CHMP3A0A140T963 221 aa16.23■□□□□ 0.19
SHROOM4-201ENST00000289292 TARSP26639 723 aaKnown RBP16.23■□□□□ 0.19
SHROOM4-201ENST00000289292 SOX11P35716 441 aa16.23■□□□□ 0.19
SHROOM4-201ENST00000289292 EIF3EP60228 445 aaKnown RBP16.23■□□□□ 0.19
SHROOM4-201ENST00000289292 STAT4Q14765 748 aa16.23■□□□□ 0.19
SHROOM4-201ENST00000289292 ANO5Q75V66 913 aa16.23■□□□□ 0.19
SHROOM4-201ENST00000289292 KDELC2Q7Z4H8 507 aa16.23■□□□□ 0.19
SHROOM4-201ENST00000289292 DCPSQ96C86 337 aaKnown RBP16.23■□□□□ 0.19
SHROOM4-201ENST00000289292 RBM15Q96T37 977 aaKnown RBP eCLIP16.23■□□□□ 0.19
SHROOM4-201ENST00000289292 CCT8L1PA6NM43 557 aa16.23■□□□□ 0.19
SHROOM4-201ENST00000289292 ORC4O43929 436 aa16.23■□□□□ 0.19
SHROOM4-201ENST00000289292 CYP19A1P11511 503 aaPredicted RBP16.23■□□□□ 0.19
SHROOM4-201ENST00000289292 ADORA2BP29275 332 aa16.23■□□□□ 0.19
SHROOM4-201ENST00000289292 PCYT1AP49585 367 aa16.23■□□□□ 0.19
SHROOM4-201ENST00000289292 OCA2Q04671 838 aa16.23■□□□□ 0.19
SHROOM4-201ENST00000289292 RABL6Q3YEC7 729 aaPredicted RBP16.23■□□□□ 0.19
SHROOM4-201ENST00000289292 FAM102AQ5T9C2 384 aaPredicted RBP16.23■□□□□ 0.19
SHROOM4-201ENST00000289292 CDHR1Q96JP9 859 aa16.23■□□□□ 0.19
SHROOM4-201ENST00000289292 FUCA2Q9BTY2 467 aa16.23■□□□□ 0.19
SHROOM4-201ENST00000289292 CYP26B1Q9NR63 512 aa16.23■□□□□ 0.19
SHROOM4-201ENST00000289292 CPSF3Q9UKF6 684 aaKnown RBP16.23■□□□□ 0.19
SHROOM4-201ENST00000289292 BNIP3LO60238 219 aa16.22■□□□□ 0.19
SHROOM4-201ENST00000289292 HADHAP40939 763 aa16.22■□□□□ 0.19
SHROOM4-201ENST00000289292 SURF1Q15526 300 aa16.22■□□□□ 0.19
SHROOM4-201ENST00000289292 PRPF31Q8WWY3 499 aaKnown RBP16.22■□□□□ 0.19
SHROOM4-201ENST00000289292 FSD1LQ9BXM9 530 aa16.22■□□□□ 0.19
SHROOM4-201ENST00000289292 L2HGDHQ9H9P8 463 aa16.22■□□□□ 0.19
SHROOM4-201ENST00000289292 PARVAQ9NVD7 372 aa16.22■□□□□ 0.19
SHROOM4-201ENST00000289292 CCDC78A2IDD5 438 aa16.22■□□□□ 0.19
SHROOM4-201ENST00000289292 MYBL1P10243 752 aa16.22■□□□□ 0.19
SHROOM4-201ENST00000289292 OSBPP22059 807 aa16.22■□□□□ 0.19
SHROOM4-201ENST00000289292 CDH6P55285 790 aa16.22■□□□□ 0.19
SHROOM4-201ENST00000289292 GPD1LQ8N335 351 aa16.22■□□□□ 0.19
SHROOM4-201ENST00000289292 ATL2Q8NHH9 583 aa16.22■□□□□ 0.19
SHROOM4-201ENST00000289292 COA1Q9GZY4 146 aa16.22■□□□□ 0.19
SHROOM4-201ENST00000289292 SYCE1LA8MT33 242 aa16.22■□□□□ 0.19
SHROOM4-201ENST00000289292 KCNN4O15554 427 aa16.22■□□□□ 0.19
SHROOM4-201ENST00000289292 HERVK_113P62684 666 aa16.22■□□□□ 0.19
SHROOM4-201ENST00000289292 HEATR6Q6AI08 1181 aaKnown RBP16.22■□□□□ 0.19
SHROOM4-201ENST00000289292 POLR3CQ9BUI4 534 aaPredicted RBP16.22■□□□□ 0.19
SHROOM4-201ENST00000289292 CCSER1Q9C0I3 900 aa16.22■□□□□ 0.19
SHROOM4-201ENST00000289292 DHX35Q9H5Z1 703 aaKnown RBP16.22■□□□□ 0.19
SHROOM4-201ENST00000289292 SLC29A2Q14542 456 aa16.22■□□□□ 0.19
SHROOM4-201ENST00000289292 TRAPPC11Q7Z392 1133 aa16.22■□□□□ 0.19
SHROOM4-201ENST00000289292 DNAAF5Q86Y56 855 aa16.22■□□□□ 0.19
SHROOM4-201ENST00000289292 MMGT1Q8N4V1 131 aa16.22■□□□□ 0.19
SHROOM4-201ENST00000289292 ACAP3Q96P50 834 aa16.22■□□□□ 0.19
SHROOM4-201ENST00000289292 ISCUQ9H1K1 167 aa16.22■□□□□ 0.19
SHROOM4-201ENST00000289292 COL15A1P39059 1388 aa16.22■□□□□ 0.19
SHROOM4-201ENST00000289292 BARGINQ6ZT62 677 aa16.22■□□□□ 0.19
SHROOM4-201ENST00000289292 LRRC34Q8IZ02 419 aa16.22■□□□□ 0.19
SHROOM4-201ENST00000289292 EPS8L3Q8TE67 593 aaKnown RBP16.22■□□□□ 0.19
SHROOM4-201ENST00000289292 CALR3Q96L12 384 aaKnown RBP16.22■□□□□ 0.19
SHROOM4-201ENST00000289292 NOD2Q9HC29 1040 aa16.22■□□□□ 0.19
SHROOM4-201ENST00000289292 CHEK2O96017 543 aa16.21■□□□□ 0.19
SHROOM4-201ENST00000289292 COMTP21964 271 aa16.21■□□□□ 0.19
SHROOM4-201ENST00000289292 QARSP47897 775 aaKnown RBP16.21■□□□□ 0.19
SHROOM4-201ENST00000289292 ARL13BQ3SXY8 428 aa16.21■□□□□ 0.19
SHROOM4-201ENST00000289292 ARHGAP18Q8N392 663 aa16.21■□□□□ 0.19
SHROOM4-201ENST00000289292 GIMAP8Q8ND71 665 aaPredicted RBP16.21■□□□□ 0.19
SHROOM4-201ENST00000289292 MAP3K14Q99558 947 aa16.21■□□□□ 0.19
SHROOM4-201ENST00000289292 RBAKQ9NYW8 714 aaPredicted RBP16.21■□□□□ 0.19
SHROOM4-201ENST00000289292 ATP9BO43861 1147 aa16.21■□□□□ 0.19
SHROOM4-201ENST00000289292 P4HBP07237 508 aaKnown RBP16.21■□□□□ 0.19
SHROOM4-201ENST00000289292 ABCD1P33897 745 aa16.21■□□□□ 0.19
SHROOM4-201ENST00000289292 FMO5P49326 533 aa16.21■□□□□ 0.19
SHROOM4-201ENST00000289292 ITGA8P53708 1063 aa16.21■□□□□ 0.19
SHROOM4-201ENST00000289292 TFDP2Q14188 446 aa16.21■□□□□ 0.19
SHROOM4-201ENST00000289292 KYNUQ16719 465 aa16.21■□□□□ 0.19
SHROOM4-201ENST00000289292 BBS5Q8N3I7 341 aa16.21■□□□□ 0.19
SHROOM4-201ENST00000289292 ACSF2Q96CM8 615 aaPredicted RBP16.21■□□□□ 0.19
SHROOM4-201ENST00000289292 FAM217BQ9NTX9 383 aaPredicted RBP16.21■□□□□ 0.19
SHROOM4-201ENST00000289292 HSPBP1Q9NZL4 362 aa16.21■□□□□ 0.19
SHROOM4-201ENST00000289292 MORF4L2Q15014 288 aa16.21■□□□□ 0.19
SHROOM4-201ENST00000289292 EPC2Q52LR7 807 aa16.21■□□□□ 0.19
SHROOM4-201ENST00000289292 THTPAQ9BU02 230 aa16.21■□□□□ 0.19
SHROOM4-201ENST00000289292 STK33Q9BYT3 514 aa16.21■□□□□ 0.19
SHROOM4-201ENST00000289292 DDX56Q9NY93 547 aaKnown RBP16.21■□□□□ 0.19
SHROOM4-201ENST00000289292 AURKCQ9UQB9 309 aa16.21■□□□□ 0.19
SHROOM4-201ENST00000289292 NEU2Q9Y3R4 380 aa16.21■□□□□ 0.19
SHROOM4-201ENST00000289292 PFASO15067 1338 aa16.21■□□□□ 0.19
SHROOM4-201ENST00000289292 FAM107AO95990 144 aa16.21■□□□□ 0.19
SHROOM4-201ENST00000289292 ARHGAP27Q6ZUM4 889 aa16.21■□□□□ 0.19
SHROOM4-201ENST00000289292 FOXP4Q8IVH2 680 aaPredicted RBP16.21■□□□□ 0.19
SHROOM4-201ENST00000289292 XPO7Q9UIA9 1087 aaKnown RBP16.21■□□□□ 0.19
SHROOM4-201ENST00000289292 TYK2P29597 1187 aa16.21■□□□□ 0.18
SHROOM4-201ENST00000289292 KCNA1Q09470 495 aa16.21■□□□□ 0.18
SHROOM4-201ENST00000289292 CAPRIN1Q14444 709 aaKnown RBP16.21■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms