RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 SLC16A10Q8TF71 515 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 COG1Q8WTW3 980 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 RSPH1Q8WYR4 309 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 VPS50Q96JG6 964 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 OXCT2Q9BYC2 517 aaPredicted RBP4.29□□□□□ -1.72
SCN3A-201ENST00000283254 RIC8BQ9NVN3 520 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 TUBGCP4Q9UGJ1 667 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 MRFAP1Q9Y605 127 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 TTC37Q6PGP7 1564 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 LGALS16A8MUM7 142 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 MAFGO15525 162 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 RHOBTB3O94955 611 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 TMEM132DQ14C87 1099 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 PDK1Q15118 436 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 XKR3Q5GH77 459 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 TRIM65Q6PJ69 517 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 RHPN2Q8IUC4 686 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 OTUD5Q96G74 571 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 MRPL48Q96GC5 212 aaKnown RBP4.29□□□□□ -1.72
SCN3A-201ENST00000283254 TMEM169Q96HH4 297 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 GLT1D1Q96MS3 346 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 CNPY3Q9BT09 278 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.29□□□□□ -1.72
SCN3A-201ENST00000283254 ZNF556Q9HAH1 456 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 PDE11AQ9HCR9 933 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 SAYSD1Q9NPB0 183 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 SH3BP1Q9Y3L3 701 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 TNS3Q68CZ2 1445 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 DEAF1O75398 565 aaPredicted RBP4.29□□□□□ -1.72
SCN3A-201ENST00000283254 PYGMP11217 842 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 MARK3P27448 753 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 NCALDP61601 193 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 COG2Q14746 738 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 GRM4Q14833 912 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 STARD3Q14849 445 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 HIST2H2ACQ16777 129 aaPredicted RBP4.29□□□□□ -1.72
SCN3A-201ENST00000283254 HIST2H2AA3Q6FI13 130 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 SYDE1Q6ZW31 735 aaPredicted RBP4.29□□□□□ -1.72
SCN3A-201ENST00000283254 RNF180Q86T96 592 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 RASSF3Q86WH2 238 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 TRIM48Q8IWZ4 208 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 EMILIN2Q9BXX0 1053 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 LMBRD1Q9NUN5 540 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 AKAP7Q9P0M2 348 aaPredicted RBP4.29□□□□□ -1.72
SCN3A-201ENST00000283254 DNAJC12Q9UKB3 198 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 PRG3Q9Y2Y8 225 aaPredicted RBP4.29□□□□□ -1.72
SCN3A-201ENST00000283254 GCC2Q8IWJ2 1684 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 A0A0G2JND7 137 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 H7C4K7 107 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 ERN1O75460 977 aaKnown RBP4.29□□□□□ -1.72
SCN3A-201ENST00000283254 PEX3P56589 373 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 IFT88Q13099 833 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 NNTQ13423 1086 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 CTTNQ14247 550 aaKnown RBP4.29□□□□□ -1.72
SCN3A-201ENST00000283254 TTLL9Q3SXZ7 439 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 C6orf10Q5SRN2 563 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 POTEAQ6S8J7 498 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 GUF1Q8N442 669 aaKnown RBP4.29□□□□□ -1.72
SCN3A-201ENST00000283254 NSUN7Q8NE18 718 aaKnown RBP4.29□□□□□ -1.72
SCN3A-201ENST00000283254 SNF8Q96H20 258 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 PCIF1Q9H4Z3 704 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 PIN4Q9Y237 131 aaKnown RBP4.29□□□□□ -1.72
SCN3A-201ENST00000283254 MYO9BQ13459 2157 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 SHROOM2Q13796 1616 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 HAUS5O94927 633 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 GH1P01241 217 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 TXNP10599 105 aaKnown RBP4.29□□□□□ -1.72
SCN3A-201ENST00000283254 ADORA2BP29275 332 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 MAP3K7CLP57077 242 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 DYNC1I2Q13409 638 aaKnown RBP4.29□□□□□ -1.72
SCN3A-201ENST00000283254 NBPF20Q3BBV1 942 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 WDR72Q3MJ13 1102 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 PREPLQ4J6C6 727 aaPredicted RBP4.29□□□□□ -1.72
SCN3A-201ENST00000283254 TBC1D10BQ4KMP7 808 aaPredicted RBP4.29□□□□□ -1.72
SCN3A-201ENST00000283254 CHMP1BQ7LBR1 199 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 LINC00523Q86TU6 105 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 LINC00301Q8NCQ3 95 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 CEP70Q8NHQ1 597 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 ZNF564Q8TBZ8 553 aaPredicted RBP4.29□□□□□ -1.72
SCN3A-201ENST00000283254 SARS2Q9NP81 518 aaKnown RBP4.29□□□□□ -1.72
SCN3A-201ENST00000283254 SLC30A1Q9Y6M5 507 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 M0R3G1 203 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 CLIC2O15247 247 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 CSPG5O95196 566 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 MYCP01106 439 aaPredicted RBP4.29□□□□□ -1.72
SCN3A-201ENST00000283254 ATP1A1P05023 1023 aaKnown RBP4.29□□□□□ -1.72
SCN3A-201ENST00000283254 TYK2P29597 1187 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 CPT1AP50416 773 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 CYP27A1Q02318 531 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 SCRN1Q12765 414 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 CDH18Q13634 790 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 PTK6Q13882 451 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 ANO5Q75V66 913 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 ADCK2Q7Z695 626 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 SKAP1Q86WV1 359 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 SFR1Q86XK3 245 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 CD302Q8IX05 232 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 SP8Q8IXZ3 490 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 PITPNM3Q9BZ71 974 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 WNT8AQ9H1J5 351 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms