RNA–Protein interactions for RNA: ENST00000282268.7

XRCC4-201, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRCC4, Length 1,696 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-201ENST00000282268 PROZP22891 400 aa12.35□□□□□ -0.43
XRCC4-201ENST00000282268 NFX1Q12986 1120 aaKnown RBP12.35□□□□□ -0.43
XRCC4-201ENST00000282268 PTK7Q13308 1070 aa12.35□□□□□ -0.43
XRCC4-201ENST00000282268 EXOC3L4Q17RC7 722 aa12.35□□□□□ -0.43
XRCC4-201ENST00000282268 LRRC8AQ8IWT6 810 aa12.35□□□□□ -0.43
XRCC4-201ENST00000282268 CCDC150Q8NCX0 1101 aa12.35□□□□□ -0.43
XRCC4-201ENST00000282268 PARD3BQ8TEW8 1205 aa12.35□□□□□ -0.43
XRCC4-201ENST00000282268 ELMO3Q96BJ8 720 aa12.35□□□□□ -0.43
XRCC4-201ENST00000282268 ADPGKQ9BRR6 497 aa12.35□□□□□ -0.43
XRCC4-201ENST00000282268 APOL6Q9BWW8 343 aa12.35□□□□□ -0.43
XRCC4-201ENST00000282268 EIF2AQ9BY44 585 aaKnown RBP12.35□□□□□ -0.43
XRCC4-201ENST00000282268 NLRC4Q9NPP4 1024 aa12.35□□□□□ -0.43
XRCC4-201ENST00000282268 OGDHLQ9ULD0 1010 aa12.35□□□□□ -0.43
XRCC4-201ENST00000282268 TRIP12Q14669 1992 aaPredicted RBP12.35□□□□□ -0.43
XRCC4-201ENST00000282268 SCN10AQ9Y5Y9 1956 aa12.35□□□□□ -0.43
XRCC4-201ENST00000282268 MFAP3LO75121 409 aa12.35□□□□□ -0.43
XRCC4-201ENST00000282268 STAG3L1P0CL83 205 aa12.35□□□□□ -0.43
XRCC4-201ENST00000282268 CXCL8P10145 99 aa12.35□□□□□ -0.43
XRCC4-201ENST00000282268 MCF2P10911 925 aa12.35□□□□□ -0.43
XRCC4-201ENST00000282268 PTPN11Q06124 597 aaPredicted RBP12.35□□□□□ -0.43
XRCC4-201ENST00000282268 PSMD6Q15008 389 aa12.35□□□□□ -0.43
XRCC4-201ENST00000282268 GJB7Q6PEY0 223 aa12.35□□□□□ -0.43
XRCC4-201ENST00000282268 CACNA2D4Q7Z3S7 1137 aa12.35□□□□□ -0.43
XRCC4-201ENST00000282268 FAM228AQ86W67 206 aa12.35□□□□□ -0.43
XRCC4-201ENST00000282268 TMC2Q8TDI7 906 aa12.35□□□□□ -0.43
XRCC4-201ENST00000282268 U2AF1L4Q8WU68 220 aaKnown RBP12.35□□□□□ -0.43
XRCC4-201ENST00000282268 ZNF333Q96JL9 665 aa12.35□□□□□ -0.43
XRCC4-201ENST00000282268 OSBPL7Q9BZF2 842 aa12.35□□□□□ -0.43
XRCC4-201ENST00000282268 TRIM6Q9C030 488 aaPredicted RBP12.35□□□□□ -0.43
XRCC4-201ENST00000282268 TMEM117Q9H0C3 514 aa12.35□□□□□ -0.43
XRCC4-201ENST00000282268 INTS2Q9H0H0 1204 aaKnown RBP12.35□□□□□ -0.43
XRCC4-201ENST00000282268 RPF1Q9H9Y2 349 aaKnown RBP12.35□□□□□ -0.43
XRCC4-201ENST00000282268 AGPAT5Q9NUQ2 364 aa12.35□□□□□ -0.43
XRCC4-201ENST00000282268 HTTP42858 3142 aa12.34□□□□□ -0.43
XRCC4-201ENST00000282268 STX10O60499 249 aa12.34□□□□□ -0.43
XRCC4-201ENST00000282268 PQBP1O60828 265 aaKnown RBP12.34□□□□□ -0.43
XRCC4-201ENST00000282268 LRRN2O75325 713 aa12.34□□□□□ -0.43
XRCC4-201ENST00000282268 RPS6KA5O75582 802 aa12.34□□□□□ -0.43
XRCC4-201ENST00000282268 GHRP10912 638 aa12.34□□□□□ -0.43
XRCC4-201ENST00000282268 PON1P27169 355 aa12.34□□□□□ -0.43
XRCC4-201ENST00000282268 HOXA11P31270 313 aaPredicted RBP12.34□□□□□ -0.43
XRCC4-201ENST00000282268 KRT9P35527 623 aa12.34□□□□□ -0.43
XRCC4-201ENST00000282268 MXI1P50539 228 aa12.34□□□□□ -0.43
XRCC4-201ENST00000282268 POLR2FP61218 127 aaKnown RBP12.34□□□□□ -0.43
XRCC4-201ENST00000282268 MGAT3Q09327 533 aa12.34□□□□□ -0.43
XRCC4-201ENST00000282268 BIRC3Q13489 604 aa12.34□□□□□ -0.43
XRCC4-201ENST00000282268 TRIM14Q14142 442 aa12.34□□□□□ -0.43
XRCC4-201ENST00000282268 ENOX2Q16206 610 aaKnown RBP12.34□□□□□ -0.43
XRCC4-201ENST00000282268 ZNF618Q5T7W0 954 aa12.34□□□□□ -0.43
XRCC4-201ENST00000282268 NOTUMQ6P988 496 aa12.34□□□□□ -0.43
XRCC4-201ENST00000282268 USP37Q86T82 979 aa12.34□□□□□ -0.43
XRCC4-201ENST00000282268 BRSK2Q8IWQ3 736 aa12.34□□□□□ -0.43
XRCC4-201ENST00000282268 TC2NQ8N9U0 490 aa12.34□□□□□ -0.43
XRCC4-201ENST00000282268 ZNF516Q92618 1163 aa12.34□□□□□ -0.43
XRCC4-201ENST00000282268 NUP58Q9BVL2 599 aa12.34□□□□□ -0.43
XRCC4-201ENST00000282268 CPSF3Q9UKF6 684 aaKnown RBP12.34□□□□□ -0.43
XRCC4-201ENST00000282268 LUC7L2Q9Y383 392 aaKnown RBP12.34□□□□□ -0.43
XRCC4-201ENST00000282268 HES2Q9Y543 173 aa12.34□□□□□ -0.43
XRCC4-201ENST00000282268 FRMPD3Q5JV73 1810 aa12.34□□□□□ -0.43
XRCC4-201ENST00000282268 PTPRJQ12913 1337 aa12.33□□□□□ -0.43
XRCC4-201ENST00000282268 CEP350Q5VT06 3117 aa12.33□□□□□ -0.44
XRCC4-201ENST00000282268 A0A1B0GUA9 196 aa12.33□□□□□ -0.44
XRCC4-201ENST00000282268 FAM189A1O60320 539 aa12.33□□□□□ -0.44
XRCC4-201ENST00000282268 N4BP1O75113 896 aaKnown RBP12.33□□□□□ -0.44
XRCC4-201ENST00000282268 PHACTR2O75167 634 aa12.33□□□□□ -0.44
XRCC4-201ENST00000282268 SGPL1O95470 568 aa12.33□□□□□ -0.44
XRCC4-201ENST00000282268 CD52P31358 61 aa12.33□□□□□ -0.44
XRCC4-201ENST00000282268 TFAMQ00059 246 aaKnown RBP12.33□□□□□ -0.44
XRCC4-201ENST00000282268 CETN1Q12798 172 aa12.33□□□□□ -0.44
XRCC4-201ENST00000282268 HSP90AA2PQ14568 343 aaPredicted RBP12.33□□□□□ -0.44
XRCC4-201ENST00000282268 SLC27A1Q6PCB7 646 aa12.33□□□□□ -0.44
XRCC4-201ENST00000282268 RRAGAQ7L523 313 aa12.33□□□□□ -0.44
XRCC4-201ENST00000282268 SLC43A3Q8NBI5 491 aa12.33□□□□□ -0.44
XRCC4-201ENST00000282268 DIS3LQ8TF46 1054 aaKnown RBP12.33□□□□□ -0.44
XRCC4-201ENST00000282268 CGRRF1Q99675 332 aa12.33□□□□□ -0.44
XRCC4-201ENST00000282268 TMEM8AQ9HCN3 771 aa12.33□□□□□ -0.44
XRCC4-201ENST00000282268 RNF19AQ9NV58 838 aa12.33□□□□□ -0.44
XRCC4-201ENST00000282268 SNTG2Q9NY99 539 aa12.33□□□□□ -0.44
XRCC4-201ENST00000282268 PYCARDQ9ULZ3 195 aa12.33□□□□□ -0.44
XRCC4-201ENST00000282268 CAPN11Q9UMQ6 739 aa12.33□□□□□ -0.44
XRCC4-201ENST00000282268 ST3GAL5Q9UNP4 418 aa12.33□□□□□ -0.44
XRCC4-201ENST00000282268 CENPFP49454 3210 aa12.33□□□□□ -0.44
XRCC4-201ENST00000282268 LACTBL1A8MY62 500 aa12.32□□□□□ -0.44
XRCC4-201ENST00000282268 NOL4O94818 638 aa12.32□□□□□ -0.44
XRCC4-201ENST00000282268 CKBP12277 381 aa12.32□□□□□ -0.44
XRCC4-201ENST00000282268 SKILP12757 684 aa12.32□□□□□ -0.44
XRCC4-201ENST00000282268 RAPGEF1Q13905 1077 aa12.32□□□□□ -0.44
XRCC4-201ENST00000282268 PKN2Q16513 984 aaKnown RBP12.32□□□□□ -0.44
XRCC4-201ENST00000282268 TSR1Q2NL82 804 aaKnown RBP12.32□□□□□ -0.44
XRCC4-201ENST00000282268 TRIM71Q2Q1W2 868 aaKnown RBP12.32□□□□□ -0.44
XRCC4-201ENST00000282268 DCAF4L1Q3SXM0 396 aa12.32□□□□□ -0.44
XRCC4-201ENST00000282268 KRT39Q6A163 491 aa12.32□□□□□ -0.44
XRCC4-201ENST00000282268 TWF2Q6IBS0 349 aaKnown RBP12.32□□□□□ -0.44
XRCC4-201ENST00000282268 SV2AQ7L0J3 742 aa12.32□□□□□ -0.44
XRCC4-201ENST00000282268 CNGA4Q8IV77 575 aa12.32□□□□□ -0.44
XRCC4-201ENST00000282268 TMEM130Q8N3G9 435 aa12.32□□□□□ -0.44
XRCC4-201ENST00000282268 EHBP1Q8NDI1 1231 aa12.32□□□□□ -0.44
XRCC4-201ENST00000282268 ZNF397Q8NF99 534 aaPredicted RBP12.32□□□□□ -0.44
XRCC4-201ENST00000282268 OR5B17Q8NGF7 314 aa12.32□□□□□ -0.44
XRCC4-201ENST00000282268 SEMA4DQ92854 862 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms