RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 KIAA0391O15091 583 aaKnown RBP9.18□□□□□ -0.94
SCUBE3-201ENST00000274938 GNA15P30679 374 aa9.18□□□□□ -0.94
SCUBE3-201ENST00000274938 SLC16A2P36021 539 aa9.18□□□□□ -0.94
SCUBE3-201ENST00000274938 GCLMP48507 274 aa9.18□□□□□ -0.94
SCUBE3-201ENST00000274938 KYNUQ16719 465 aa9.18□□□□□ -0.94
SCUBE3-201ENST00000274938 UBE2SQ16763 222 aa9.18□□□□□ -0.94
SCUBE3-201ENST00000274938 KYAT1Q16773 422 aa9.18□□□□□ -0.94
SCUBE3-201ENST00000274938 TBC1D19Q8N5T2 526 aa9.18□□□□□ -0.94
SCUBE3-201ENST00000274938 OSBP2Q969R2 916 aa9.18□□□□□ -0.94
SCUBE3-201ENST00000274938 DCPSQ96C86 337 aaKnown RBP9.18□□□□□ -0.94
SCUBE3-201ENST00000274938 CYFIP2Q96F07 1278 aa9.18□□□□□ -0.94
SCUBE3-201ENST00000274938 NSL1Q96IY1 281 aa9.18□□□□□ -0.94
SCUBE3-201ENST00000274938 ANKRD27Q96NW4 1050 aa9.18□□□□□ -0.94
SCUBE3-201ENST00000274938 C2orf40Q9H1Z8 148 aa9.18□□□□□ -0.94
SCUBE3-201ENST00000274938 ALDH8A1Q9H2A2 487 aaPredicted RBP9.18□□□□□ -0.94
SCUBE3-201ENST00000274938 UNC45AQ9H3U1 944 aa9.18□□□□□ -0.94
SCUBE3-201ENST00000274938 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.18□□□□□ -0.94
SCUBE3-201ENST00000274938 USP27XA6NNY8 438 aa9.18□□□□□ -0.94
SCUBE3-201ENST00000274938 HUS1O60921 280 aa9.18□□□□□ -0.94
SCUBE3-201ENST00000274938 RTN2O75298 545 aa9.18□□□□□ -0.94
SCUBE3-201ENST00000274938 RASGRF1Q13972 1273 aa9.18□□□□□ -0.94
SCUBE3-201ENST00000274938 KCNB1Q14721 858 aa9.18□□□□□ -0.94
SCUBE3-201ENST00000274938 RAB42Q8N4Z0 105 aa9.18□□□□□ -0.94
SCUBE3-201ENST00000274938 RSPH1Q8WYR4 309 aa9.18□□□□□ -0.94
SCUBE3-201ENST00000274938 TRIM8Q9BZR9 551 aa9.18□□□□□ -0.94
SCUBE3-201ENST00000274938 AIPL1Q9NZN9 384 aa9.18□□□□□ -0.94
SCUBE3-201ENST00000274938 SELENONQ9NZV5 590 aa9.18□□□□□ -0.94
SCUBE3-201ENST00000274938 ZMYND8Q9ULU4 1186 aaPredicted RBP9.18□□□□□ -0.94
SCUBE3-201ENST00000274938 CDYLQ9Y232 598 aa9.18□□□□□ -0.94
SCUBE3-201ENST00000274938 SSU72P8A0A1W2PR75 194 aa9.18□□□□□ -0.94
SCUBE3-201ENST00000274938 CLDN3O15551 220 aa9.18□□□□□ -0.94
SCUBE3-201ENST00000274938 FGFR4P22455 802 aa9.18□□□□□ -0.94
SCUBE3-201ENST00000274938 HMOX2P30519 316 aa9.18□□□□□ -0.94
SCUBE3-201ENST00000274938 OSTNP61366 133 aa9.18□□□□□ -0.94
SCUBE3-201ENST00000274938 TSPY1Q01534 308 aa9.18□□□□□ -0.94
SCUBE3-201ENST00000274938 UBE3AQ05086 875 aa9.18□□□□□ -0.94
SCUBE3-201ENST00000274938 MICU2Q8IYU8 434 aa9.18□□□□□ -0.94
SCUBE3-201ENST00000274938 ANKRD7Q92527 254 aa9.18□□□□□ -0.94
SCUBE3-201ENST00000274938 RBBP8Q99708 897 aa9.18□□□□□ -0.94
SCUBE3-201ENST00000274938 LRRC1Q9BTT6 524 aa9.18□□□□□ -0.94
SCUBE3-201ENST00000274938 BICRAQ9NZM4 1560 aa9.18□□□□□ -0.94
SCUBE3-201ENST00000274938 PHKA2P46019 1235 aa9.17□□□□□ -0.94
SCUBE3-201ENST00000274938 ARPP19P56211 112 aa9.17□□□□□ -0.94
SCUBE3-201ENST00000274938 KRT76Q01546 638 aa9.17□□□□□ -0.94
SCUBE3-201ENST00000274938 WASHC5Q12768 1159 aa9.17□□□□□ -0.94
SCUBE3-201ENST00000274938 RFX8Q6ZV50 586 aa9.17□□□□□ -0.94
SCUBE3-201ENST00000274938 RHPN2Q8IUC4 686 aa9.17□□□□□ -0.94
SCUBE3-201ENST00000274938 PLEKHA8Q96JA3 519 aa9.17□□□□□ -0.94
SCUBE3-201ENST00000274938 SLC9A1P19634 815 aa9.17□□□□□ -0.94
SCUBE3-201ENST00000274938 DYNLL1P63167 89 aaKnown RBP9.17□□□□□ -0.94
SCUBE3-201ENST00000274938 LAMC2Q13753 1193 aa9.17□□□□□ -0.94
SCUBE3-201ENST00000274938 KBTBD12Q3ZCT8 623 aa9.17□□□□□ -0.94
SCUBE3-201ENST00000274938 PADI6Q6TGC4 694 aa9.17□□□□□ -0.94
SCUBE3-201ENST00000274938 P3H2Q8IVL5 708 aa9.17□□□□□ -0.94
SCUBE3-201ENST00000274938 PUS3Q9BZE2 481 aaKnown RBP9.17□□□□□ -0.94
SCUBE3-201ENST00000274938 SP110Q9HB58 689 aa9.17□□□□□ -0.94
SCUBE3-201ENST00000274938 DLGAP2Q9P1A6 1054 aa9.17□□□□□ -0.94
SCUBE3-201ENST00000274938 RSPH10B2B2RC85 870 aa9.17□□□□□ -0.94
SCUBE3-201ENST00000274938 RSPH10BP0C881 870 aa9.17□□□□□ -0.94
SCUBE3-201ENST00000274938 DSG1Q02413 1049 aa9.17□□□□□ -0.94
SCUBE3-201ENST00000274938 FOXP4Q8IVH2 680 aaPredicted RBP9.17□□□□□ -0.94
SCUBE3-201ENST00000274938 AGPAT1Q99943 283 aa9.17□□□□□ -0.94
SCUBE3-201ENST00000274938 CNPY3Q9BT09 278 aa9.17□□□□□ -0.94
SCUBE3-201ENST00000274938 PUS7LQ9H0K6 701 aaKnown RBP9.17□□□□□ -0.94
SCUBE3-201ENST00000274938 H2AFY2Q9P0M6 372 aaPredicted RBP9.17□□□□□ -0.94
SCUBE3-201ENST00000274938 SFNP31947 248 aa9.17□□□□□ -0.94
SCUBE3-201ENST00000274938 LSP1P33241 339 aa9.17□□□□□ -0.94
SCUBE3-201ENST00000274938 MAPK6Q16659 721 aa9.17□□□□□ -0.94
SCUBE3-201ENST00000274938 AARS2Q5JTZ9 985 aaKnown RBP9.17□□□□□ -0.94
SCUBE3-201ENST00000274938 ACBD5Q5T8D3 534 aaPredicted RBP9.17□□□□□ -0.94
SCUBE3-201ENST00000274938 AATKQ6ZMQ8 1374 aa9.17□□□□□ -0.94
SCUBE3-201ENST00000274938 SULF1Q8IWU6 871 aa9.17□□□□□ -0.94
SCUBE3-201ENST00000274938 HOMEZQ8IX15 550 aa9.17□□□□□ -0.94
SCUBE3-201ENST00000274938 RAPGEF6Q8TEU7 1601 aa9.17□□□□□ -0.94
SCUBE3-201ENST00000274938 C1orf54Q8WWF1 131 aa9.17□□□□□ -0.94
SCUBE3-201ENST00000274938 RMDN1Q96DB5 314 aa9.17□□□□□ -0.94
SCUBE3-201ENST00000274938 GINS4Q9BRT9 223 aa9.17□□□□□ -0.94
SCUBE3-201ENST00000274938 BRD8Q9H0E9 1235 aa9.17□□□□□ -0.94
SCUBE3-201ENST00000274938 CDY2AQ9Y6F7 541 aa9.17□□□□□ -0.94
SCUBE3-201ENST00000274938 CDY1Q9Y6F8 540 aa9.17□□□□□ -0.94
SCUBE3-201ENST00000274938 B2RBV5 119 aa9.17□□□□□ -0.94
SCUBE3-201ENST00000274938 GOLGA8RI6L899 631 aa9.17□□□□□ -0.94
SCUBE3-201ENST00000274938 TRIM71Q2Q1W2 868 aaKnown RBP9.17□□□□□ -0.94
SCUBE3-201ENST00000274938 C4orf22Q6V702 233 aa9.17□□□□□ -0.94
SCUBE3-201ENST00000274938 NPHS2Q9NP85 383 aa9.17□□□□□ -0.94
SCUBE3-201ENST00000274938 TMEM161AQ9NX61 479 aa9.17□□□□□ -0.94
SCUBE3-201ENST00000274938 PI4KBQ9UBF8 816 aa9.17□□□□□ -0.94
SCUBE3-201ENST00000274938 AMACRQ9UHK6 382 aa9.17□□□□□ -0.94
SCUBE3-201ENST00000274938 LRRIQ3A6PVS8 624 aaPredicted RBP9.17□□□□□ -0.94
SCUBE3-201ENST00000274938 NBNO60934 754 aa9.17□□□□□ -0.94
SCUBE3-201ENST00000274938 ENO3P13929 434 aaPredicted RBP9.17□□□□□ -0.94
SCUBE3-201ENST00000274938 TBC1D10BQ4KMP7 808 aaPredicted RBP9.17□□□□□ -0.94
SCUBE3-201ENST00000274938 NOD2Q9HC29 1040 aa9.17□□□□□ -0.94
SCUBE3-201ENST00000274938 NFIBO00712 420 aa9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 RAD51Q06609 339 aa9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 PTGISQ16647 500 aa9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 CCDC142Q17RM4 750 aa9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 TTC33Q6PID6 262 aaPredicted RBP9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 CATSPER4Q7RTX7 472 aa9.16□□□□□ -0.94
SCUBE3-201ENST00000274938 GPR141Q7Z602 305 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms