RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 PCNX4Q63HM2 1172 aa11.15□□□□□ -0.62
LRTM1-201ENST00000273286 RALYLQ86SE5 291 aaKnown RBP11.15□□□□□ -0.62
LRTM1-201ENST00000273286 C12orf40Q86WS4 652 aa11.15□□□□□ -0.62
LRTM1-201ENST00000273286 SPATA33Q96N06 139 aa11.15□□□□□ -0.62
LRTM1-201ENST00000273286 MAD2L2Q9UI95 211 aa11.15□□□□□ -0.62
LRTM1-201ENST00000273286 GGPS1O95749 300 aa11.14□□□□□ -0.63
LRTM1-201ENST00000273286 IGHDP01880 384 aa11.14□□□□□ -0.63
LRTM1-201ENST00000273286 MYCLP12524 364 aaPredicted RBP11.14□□□□□ -0.63
LRTM1-201ENST00000273286 OXCT1P55809 520 aa11.14□□□□□ -0.63
LRTM1-201ENST00000273286 NEDD9Q14511 834 aa11.14□□□□□ -0.63
LRTM1-201ENST00000273286 UBE3DQ7Z6J8 389 aa11.14□□□□□ -0.63
LRTM1-201ENST00000273286 DHX38Q92620 1227 aaKnown RBP11.14□□□□□ -0.63
LRTM1-201ENST00000273286 TGS1Q96RS0 853 aaKnown RBP11.14□□□□□ -0.63
LRTM1-201ENST00000273286 ALG1Q9BT22 464 aa11.14□□□□□ -0.63
LRTM1-201ENST00000273286 RIOX1Q9H6W3 641 aa11.14□□□□□ -0.63
LRTM1-201ENST00000273286 MLXIPQ9HAP2 919 aa11.14□□□□□ -0.63
LRTM1-201ENST00000273286 INSL6Q9Y581 213 aa11.14□□□□□ -0.63
LRTM1-201ENST00000273286 XIRP2A4UGR9 3374 aa11.13□□□□□ -0.63
LRTM1-201ENST00000273286 NOP56O00567 594 aaKnown RBP11.13□□□□□ -0.63
LRTM1-201ENST00000273286 IFIT3O14879 490 aaKnown RBP11.13□□□□□ -0.63
LRTM1-201ENST00000273286 NBNO60934 754 aa11.13□□□□□ -0.63
LRTM1-201ENST00000273286 AMHP03971 560 aa11.13□□□□□ -0.63
LRTM1-201ENST00000273286 ZNF286BP0CG31 522 aa11.13□□□□□ -0.63
LRTM1-201ENST00000273286 CD8BP10966 210 aa11.13□□□□□ -0.63
LRTM1-201ENST00000273286 GNAT1P11488 350 aa11.13□□□□□ -0.63
LRTM1-201ENST00000273286 JUNBP17275 347 aaPredicted RBP11.13□□□□□ -0.63
LRTM1-201ENST00000273286 ITIH2P19823 946 aa11.13□□□□□ -0.63
LRTM1-201ENST00000273286 CD96P40200 585 aa11.13□□□□□ -0.63
LRTM1-201ENST00000273286 GRB10Q13322 594 aa11.13□□□□□ -0.63
LRTM1-201ENST00000273286 GRM4Q14833 912 aa11.13□□□□□ -0.63
LRTM1-201ENST00000273286 GPNMBQ14956 572 aa11.13□□□□□ -0.63
LRTM1-201ENST00000273286 HSDL1Q3SXM5 330 aa11.13□□□□□ -0.63
LRTM1-201ENST00000273286 XRRA1Q6P2D8 792 aa11.13□□□□□ -0.63
LRTM1-201ENST00000273286 SERINC5Q86VE9 423 aa11.13□□□□□ -0.63
LRTM1-201ENST00000273286 HOMER1Q86YM7 354 aa11.13□□□□□ -0.63
LRTM1-201ENST00000273286 NCOA7Q8NI08 942 aa11.13□□□□□ -0.63
LRTM1-201ENST00000273286 ELMO3Q96BJ8 720 aa11.13□□□□□ -0.63
LRTM1-201ENST00000273286 ASIC4Q96FT7 647 aa11.13□□□□□ -0.63
LRTM1-201ENST00000273286 SAMD11Q96NU1 681 aa11.13□□□□□ -0.63
LRTM1-201ENST00000273286 MAP3K14Q99558 947 aa11.13□□□□□ -0.63
LRTM1-201ENST00000273286 MTA3Q9BTC8 594 aa11.13□□□□□ -0.63
LRTM1-201ENST00000273286 CERS4Q9HA82 394 aa11.13□□□□□ -0.63
LRTM1-201ENST00000273286 VAV3Q9UKW4 847 aa11.13□□□□□ -0.63
LRTM1-201ENST00000273286 C17orf102A2RUQ5 167 aa11.12□□□□□ -0.63
LRTM1-201ENST00000273286 RSPH10B2B2RC85 870 aa11.12□□□□□ -0.63
LRTM1-201ENST00000273286 RFXAPO00287 272 aa11.12□□□□□ -0.63
LRTM1-201ENST00000273286 RSPH10BP0C881 870 aa11.12□□□□□ -0.63
LRTM1-201ENST00000273286 UBA1P22314 1058 aaKnown RBP11.12□□□□□ -0.63
LRTM1-201ENST00000273286 SMARCA1P28370 1054 aa11.12□□□□□ -0.63
LRTM1-201ENST00000273286 HOXA13P31271 388 aaPredicted RBP11.12□□□□□ -0.63
LRTM1-201ENST00000273286 HOXC8P31273 242 aa11.12□□□□□ -0.63
LRTM1-201ENST00000273286 ICAM3P32942 547 aa11.12□□□□□ -0.63
LRTM1-201ENST00000273286 KIF5BP33176 963 aa11.12□□□□□ -0.63
LRTM1-201ENST00000273286 ERVK-21P61565 698 aa11.12□□□□□ -0.63
LRTM1-201ENST00000273286 TFF2Q03403 129 aa11.12□□□□□ -0.63
LRTM1-201ENST00000273286 PRKCQQ04759 706 aa11.12□□□□□ -0.63
LRTM1-201ENST00000273286 WTAPQ15007 396 aa11.12□□□□□ -0.63
LRTM1-201ENST00000273286 TRIM71Q2Q1W2 868 aaKnown RBP11.12□□□□□ -0.63
LRTM1-201ENST00000273286 ZNF618Q5T7W0 954 aa11.12□□□□□ -0.63
LRTM1-201ENST00000273286 ZBTB37Q5TC79 503 aa11.12□□□□□ -0.63
LRTM1-201ENST00000273286 CATIPQ7Z7H3 387 aa11.12□□□□□ -0.63
LRTM1-201ENST00000273286 GIMAP8Q8ND71 665 aaPredicted RBP11.12□□□□□ -0.63
LRTM1-201ENST00000273286 PPP1R13LQ8WUF5 828 aa11.12□□□□□ -0.63
LRTM1-201ENST00000273286 INPP4AQ96PE3 977 aaPredicted RBP11.12□□□□□ -0.63
LRTM1-201ENST00000273286 C16orf70Q9BSU1 422 aa11.12□□□□□ -0.63
LRTM1-201ENST00000273286 TRAIPQ9BWF2 469 aa11.12□□□□□ -0.63
LRTM1-201ENST00000273286 ZNF215Q9UL58 517 aaPredicted RBP11.12□□□□□ -0.63
LRTM1-201ENST00000273286 CYP8B1Q9UNU6 501 aa11.12□□□□□ -0.63
LRTM1-201ENST00000273286 MYH7BA7E2Y1 1941 aa11.12□□□□□ -0.63
LRTM1-201ENST00000273286 FRMPD4Q14CM0 1322 aa11.12□□□□□ -0.63
LRTM1-201ENST00000273286 EPOPA6NHQ4 379 aa11.11□□□□□ -0.63
LRTM1-201ENST00000273286 FANCGO15287 622 aa11.11□□□□□ -0.63
LRTM1-201ENST00000273286 FIBPO43427 364 aa11.11□□□□□ -0.63
LRTM1-201ENST00000273286 LPXNO60711 386 aa11.11□□□□□ -0.63
LRTM1-201ENST00000273286 PPP1R11O60927 126 aaPredicted RBP11.11□□□□□ -0.63
LRTM1-201ENST00000273286 DEFB103AP81534 67 aa11.11□□□□□ -0.63
LRTM1-201ENST00000273286 TROAPQ12815 778 aa11.11□□□□□ -0.63
LRTM1-201ENST00000273286 TTC22Q5TAA0 569 aa11.11□□□□□ -0.63
LRTM1-201ENST00000273286 METTL7BQ6UX53 244 aa11.11□□□□□ -0.63
LRTM1-201ENST00000273286 CYB5R4Q7L1T6 521 aa11.11□□□□□ -0.63
LRTM1-201ENST00000273286 SEPT8Q92599 483 aa11.11□□□□□ -0.63
LRTM1-201ENST00000273286 APBB2Q92870 758 aa11.11□□□□□ -0.63
LRTM1-201ENST00000273286 CUL5Q93034 780 aa11.11□□□□□ -0.63
LRTM1-201ENST00000273286 ATP6V0A1Q93050 837 aa11.11□□□□□ -0.63
LRTM1-201ENST00000273286 CDHR1Q96JP9 859 aa11.11□□□□□ -0.63
LRTM1-201ENST00000273286 HRASLS5Q96KN8 279 aa11.11□□□□□ -0.63
LRTM1-201ENST00000273286 PIGSQ96S52 555 aa11.11□□□□□ -0.63
LRTM1-201ENST00000273286 SENP7Q9BQF6 1050 aa11.11□□□□□ -0.63
LRTM1-201ENST00000273286 PLAGL2Q9UPG8 496 aa11.11□□□□□ -0.63
LRTM1-201ENST00000273286 LINC01553A4QN01 128 aa11.1□□□□□ -0.63
LRTM1-201ENST00000273286 LGALS2P05162 132 aa11.1□□□□□ -0.63
LRTM1-201ENST00000273286 RPLP2P05387 115 aaKnown RBP11.1□□□□□ -0.63
LRTM1-201ENST00000273286 CYP21A2P08686 494 aa11.1□□□□□ -0.63
LRTM1-201ENST00000273286 FUT4P22083 530 aa11.1□□□□□ -0.63
LRTM1-201ENST00000273286 THPOP40225 353 aa11.1□□□□□ -0.63
LRTM1-201ENST00000273286 KCNQ1P51787 676 aa11.1□□□□□ -0.63
LRTM1-201ENST00000273286 HTRA4P83105 476 aaPredicted RBP11.1□□□□□ -0.63
LRTM1-201ENST00000273286 RING1Q06587 406 aa11.1□□□□□ -0.63
LRTM1-201ENST00000273286 PTPROQ16827 1216 aa11.1□□□□□ -0.63
LRTM1-201ENST00000273286 PLEKHG4Q58EX7 1191 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms