RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 CSRNP2Q9H175 543 aa9.97□□□□□ -0.81
TPM3-201ENST00000271850 ZSWIM4Q9H7M6 989 aa9.97□□□□□ -0.81
TPM3-201ENST00000271850 KCNK12Q9HB15 430 aa9.97□□□□□ -0.81
TPM3-201ENST00000271850 RXFP1Q9HBX9 757 aa9.97□□□□□ -0.81
TPM3-201ENST00000271850 MAN1C1Q9NR34 630 aa9.97□□□□□ -0.81
TPM3-201ENST00000271850 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.97□□□□□ -0.81
TPM3-201ENST00000271850 CHST7Q9NS84 486 aa9.97□□□□□ -0.81
TPM3-201ENST00000271850 ORC3Q9UBD5 711 aaPredicted RBP9.97□□□□□ -0.81
TPM3-201ENST00000271850 FAN1Q9Y2M0 1017 aa9.97□□□□□ -0.81
TPM3-201ENST00000271850 FAM186AA6NE01 2351 aa9.97□□□□□ -0.81
TPM3-201ENST00000271850 PTPRZ1P23471 2315 aaPredicted RBP9.96□□□□□ -0.81
TPM3-201ENST00000271850 TDRD15B5MCY1 1934 aaKnown RBP9.96□□□□□ -0.81
TPM3-201ENST00000271850 GAS2O43903 313 aaKnown RBP9.96□□□□□ -0.82
TPM3-201ENST00000271850 ALDH2P05091 517 aa9.96□□□□□ -0.82
TPM3-201ENST00000271850 ITGA4P13612 1032 aa9.96□□□□□ -0.82
TPM3-201ENST00000271850 RPL17P18621 184 aaKnown RBP9.96□□□□□ -0.82
TPM3-201ENST00000271850 AKAP5P24588 427 aa9.96□□□□□ -0.82
TPM3-201ENST00000271850 KLRC2P26717 231 aa9.96□□□□□ -0.82
TPM3-201ENST00000271850 OR1G1P47890 313 aa9.96□□□□□ -0.82
TPM3-201ENST00000271850 DSG1Q02413 1049 aa9.96□□□□□ -0.82
TPM3-201ENST00000271850 NAB2Q15742 525 aa9.96□□□□□ -0.82
TPM3-201ENST00000271850 CPLX2Q6PUV4 134 aaKnown RBP9.96□□□□□ -0.82
TPM3-201ENST00000271850 C15orf39Q6ZRI6 1047 aa9.96□□□□□ -0.82
TPM3-201ENST00000271850 ST13P5Q8NFI4 369 aaPredicted RBP9.96□□□□□ -0.82
TPM3-201ENST00000271850 CMASQ8NFW8 434 aaPredicted RBP9.96□□□□□ -0.82
TPM3-201ENST00000271850 URGCPQ8TCY9 931 aa9.96□□□□□ -0.82
TPM3-201ENST00000271850 PIGOQ8TEQ8 1089 aa9.96□□□□□ -0.82
TPM3-201ENST00000271850 BSNDQ8WZ55 320 aa9.96□□□□□ -0.82
TPM3-201ENST00000271850 ATOH1Q92858 354 aaPredicted RBP9.96□□□□□ -0.82
TPM3-201ENST00000271850 GTF3C6Q969F1 213 aa9.96□□□□□ -0.82
TPM3-201ENST00000271850 APOL6Q9BWW8 343 aa9.96□□□□□ -0.82
TPM3-201ENST00000271850 DUSP12Q9UNI6 340 aa9.96□□□□□ -0.82
TPM3-201ENST00000271850 USP20Q9Y2K6 914 aa9.96□□□□□ -0.82
TPM3-201ENST00000271850 DMXL1Q9Y485 3027 aa9.96□□□□□ -0.82
TPM3-201ENST00000271850 VWA8A3KMH1 1905 aa9.95□□□□□ -0.82
TPM3-201ENST00000271850 FRYLO94915 3013 aa9.95□□□□□ -0.82
TPM3-201ENST00000271850 KRBA1A5PL33 1030 aa9.95□□□□□ -0.82
TPM3-201ENST00000271850 PRR23AA6NEV1 266 aa9.95□□□□□ -0.82
TPM3-201ENST00000271850 INO80B-WBP1J3KQ70 363 aa9.95□□□□□ -0.82
TPM3-201ENST00000271850 PTGESO14684 152 aa9.95□□□□□ -0.82
TPM3-201ENST00000271850 ASAP2O43150 1006 aa9.95□□□□□ -0.82
TPM3-201ENST00000271850 DKC1O60832 514 aaKnown RBP eCLIP9.95□□□□□ -0.82
TPM3-201ENST00000271850 MED24O75448 989 aa9.95□□□□□ -0.82
TPM3-201ENST00000271850 CDKL5O76039 1030 aa9.95□□□□□ -0.82
TPM3-201ENST00000271850 NPTXRO95502 500 aa9.95□□□□□ -0.82
TPM3-201ENST00000271850 SPATA31D3P0C874 917 aa9.95□□□□□ -0.82
TPM3-201ENST00000271850 KRT2P35908 639 aa9.95□□□□□ -0.82
TPM3-201ENST00000271850 GGCXP38435 758 aa9.95□□□□□ -0.82
TPM3-201ENST00000271850 NBL1P41271 181 aa9.95□□□□□ -0.82
TPM3-201ENST00000271850 POU5F1BQ06416 359 aa9.95□□□□□ -0.82
TPM3-201ENST00000271850 NBR1Q14596 966 aa9.95□□□□□ -0.82
TPM3-201ENST00000271850 RTP2Q5QGT7 225 aa9.95□□□□□ -0.82
TPM3-201ENST00000271850 CDCA2Q69YH5 1023 aaPredicted RBP9.95□□□□□ -0.82
TPM3-201ENST00000271850 NOTUMQ6P988 496 aa9.95□□□□□ -0.82
TPM3-201ENST00000271850 LILRA6Q6PI73 481 aa9.95□□□□□ -0.82
TPM3-201ENST00000271850 SPATA31D4Q6ZUB0 917 aa9.95□□□□□ -0.82
TPM3-201ENST00000271850 CCDC149Q6ZUS6 474 aa9.95□□□□□ -0.82
TPM3-201ENST00000271850 PPFIBP1Q86W92 1011 aa9.95□□□□□ -0.82
TPM3-201ENST00000271850 TCP11Q8WWU5 503 aa9.95□□□□□ -0.82
TPM3-201ENST00000271850 EMILIN2Q9BXX0 1053 aa9.95□□□□□ -0.82
TPM3-201ENST00000271850 NFKBIZQ9BYH8 718 aa9.95□□□□□ -0.82
TPM3-201ENST00000271850 RHOBTB2Q9BYZ6 727 aa9.95□□□□□ -0.82
TPM3-201ENST00000271850 POLR3FQ9H1D9 316 aaPredicted RBP9.95□□□□□ -0.82
TPM3-201ENST00000271850 TTC12Q9H892 705 aaPredicted RBP9.95□□□□□ -0.82
TPM3-201ENST00000271850 WDR6Q9NNW5 1121 aaKnown RBP9.95□□□□□ -0.82
TPM3-201ENST00000271850 MRPL17Q9NRX2 175 aaKnown RBP9.95□□□□□ -0.82
TPM3-201ENST00000271850 ANKEF1Q9NU02 776 aa9.95□□□□□ -0.82
TPM3-201ENST00000271850 KLK14Q9P0G3 267 aa9.95□□□□□ -0.82
TPM3-201ENST00000271850 KANSL3Q9P2N6 904 aa9.95□□□□□ -0.82
TPM3-201ENST00000271850 ZNF292O60281 2723 aa9.94□□□□□ -0.82
TPM3-201ENST00000271850 MTCL1Q9Y4B5 1905 aaKnown RBP9.94□□□□□ -0.82
TPM3-201ENST00000271850 CLUHO75153 1309 aa9.94□□□□□ -0.82
TPM3-201ENST00000271850 CCDC195A0A1B0GUA6 201 aa9.94□□□□□ -0.82
TPM3-201ENST00000271850 A0A1B0GUA9 196 aa9.94□□□□□ -0.82
TPM3-201ENST00000271850 CARNS1A5YM72 827 aa9.94□□□□□ -0.82
TPM3-201ENST00000271850 ADAM12O43184 909 aa9.94□□□□□ -0.82
TPM3-201ENST00000271850 TGM5O43548 720 aa9.94□□□□□ -0.82
TPM3-201ENST00000271850 USO1O60763 962 aaKnown RBP9.94□□□□□ -0.82
TPM3-201ENST00000271850 DGAT1O75907 488 aa9.94□□□□□ -0.82
TPM3-201ENST00000271850 ERLIN2O94905 339 aa9.94□□□□□ -0.82
TPM3-201ENST00000271850 URODP06132 367 aa9.94□□□□□ -0.82
TPM3-201ENST00000271850 AOC1P19801 751 aa9.94□□□□□ -0.82
TPM3-201ENST00000271850 AXLP30530 894 aa9.94□□□□□ -0.82
TPM3-201ENST00000271850 GLUD2P49448 558 aa9.94□□□□□ -0.82
TPM3-201ENST00000271850 TDGQ13569 410 aa9.94□□□□□ -0.82
TPM3-201ENST00000271850 MXD4Q14582 209 aaPredicted RBP9.94□□□□□ -0.82
TPM3-201ENST00000271850 BMS1Q14692 1282 aaKnown RBP9.94□□□□□ -0.82
TPM3-201ENST00000271850 CALCRLQ16602 461 aa9.94□□□□□ -0.82
TPM3-201ENST00000271850 ECM1Q16610 540 aa9.94□□□□□ -0.82
TPM3-201ENST00000271850 FUT10Q6P4F1 479 aa9.94□□□□□ -0.82
TPM3-201ENST00000271850 PRSS55Q6UWB4 352 aaPredicted RBP9.94□□□□□ -0.82
TPM3-201ENST00000271850 CD300LGQ6UXG3 332 aa9.94□□□□□ -0.82
TPM3-201ENST00000271850 MAEAQ7L5Y9 396 aa9.94□□□□□ -0.82
TPM3-201ENST00000271850 OTUD6AQ7L8S5 288 aa9.94□□□□□ -0.82
TPM3-201ENST00000271850 DIS3L2Q8IYB7 885 aaKnown RBP9.94□□□□□ -0.82
TPM3-201ENST00000271850 SLFN12Q8IYM2 578 aa9.94□□□□□ -0.82
TPM3-201ENST00000271850 CNNM3Q8NE01 707 aa9.94□□□□□ -0.82
TPM3-201ENST00000271850 CCDC51Q96ER9 411 aa9.94□□□□□ -0.82
TPM3-201ENST00000271850 FAM193BQ96PV7 902 aaPredicted RBP9.94□□□□□ -0.82
TPM3-201ENST00000271850 FZD8Q9H461 694 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms