RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 RMDN3Q96TC7 470 aa13.97□□□□□ -0.17
PRDM16-201ENST00000270722 NRBP1Q9UHY1 535 aa13.97□□□□□ -0.17
PRDM16-201ENST00000270722 PCDHGA3Q9Y5H0 932 aa13.97□□□□□ -0.17
PRDM16-201ENST00000270722 KPNA4O00629 521 aaPredicted RBP13.97□□□□□ -0.17
PRDM16-201ENST00000270722 SYTL3Q4VX76 610 aa13.97□□□□□ -0.17
PRDM16-201ENST00000270722 SNX30Q5VWJ9 437 aa13.97□□□□□ -0.17
PRDM16-201ENST00000270722 USP17L2Q6R6M4 530 aa13.97□□□□□ -0.17
PRDM16-201ENST00000270722 PRUNE1Q86TP1 453 aa13.97□□□□□ -0.17
PRDM16-201ENST00000270722 SEPT1Q8WYJ6 367 aa13.97□□□□□ -0.17
PRDM16-201ENST00000270722 MTMR1Q13613 665 aa13.97□□□□□ -0.17
PRDM16-201ENST00000270722 ARMC3Q5W041 872 aa13.97□□□□□ -0.17
PRDM16-201ENST00000270722 PRPF4O43172 522 aaKnown RBP eCLIP13.97□□□□□ -0.17
PRDM16-201ENST00000270722 BUB1O43683 1085 aa13.97□□□□□ -0.17
PRDM16-201ENST00000270722 LRRN2O75325 713 aa13.97□□□□□ -0.17
PRDM16-201ENST00000270722 TTC30BQ8N4P2 665 aa13.97□□□□□ -0.17
PRDM16-201ENST00000270722 ABCB11O95342 1321 aa13.97□□□□□ -0.17
PRDM16-201ENST00000270722 ZC3H4Q9UPT8 1303 aaKnown RBP13.97□□□□□ -0.17
PRDM16-201ENST00000270722 C16orf96A6NNT2 1141 aa13.97□□□□□ -0.17
PRDM16-201ENST00000270722 USP17L5A8MUK1 530 aa13.97□□□□□ -0.17
PRDM16-201ENST00000270722 CPB1P15086 417 aa13.97□□□□□ -0.17
PRDM16-201ENST00000270722 RGS4P49798 205 aa13.97□□□□□ -0.17
PRDM16-201ENST00000270722 ARHGEF7Q14155 803 aa13.97□□□□□ -0.17
PRDM16-201ENST00000270722 ZNF658Q5TYW1 1059 aaPredicted RBP13.97□□□□□ -0.17
PRDM16-201ENST00000270722 CDKL3Q8IVW4 592 aaPredicted RBP13.97□□□□□ -0.17
PRDM16-201ENST00000270722 FLT1P17948 1338 aa13.97□□□□□ -0.17
PRDM16-201ENST00000270722 GUCA1CO95843 209 aa13.97□□□□□ -0.17
PRDM16-201ENST00000270722 NUP62P37198 522 aaPredicted RBP13.97□□□□□ -0.17
PRDM16-201ENST00000270722 ZNF544Q6NX49 715 aa13.97□□□□□ -0.17
PRDM16-201ENST00000270722 PKN3Q6P5Z2 889 aa13.97□□□□□ -0.17
PRDM16-201ENST00000270722 ZFYVE19Q96K21 471 aa13.97□□□□□ -0.17
PRDM16-201ENST00000270722 URB1O60287 2271 aaKnown RBP13.97□□□□□ -0.17
PRDM16-201ENST00000270722 TAF4O00268 1085 aa13.97□□□□□ -0.17
PRDM16-201ENST00000270722 EFL1Q7Z2Z2 1120 aaKnown RBP13.97□□□□□ -0.17
PRDM16-201ENST00000270722 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.97□□□□□ -0.17
PRDM16-201ENST00000270722 DDI1Q8WTU0 396 aa13.97□□□□□ -0.17
PRDM16-201ENST00000270722 FAF2Q96CS3 445 aa13.97□□□□□ -0.17
PRDM16-201ENST00000270722 FAM20AQ96MK3 541 aa13.97□□□□□ -0.17
PRDM16-201ENST00000270722 TMEM245Q9H330 911 aa13.97□□□□□ -0.17
PRDM16-201ENST00000270722 ZNF556Q9HAH1 456 aa13.97□□□□□ -0.17
PRDM16-201ENST00000270722 FKBP14Q9NWM8 211 aa13.97□□□□□ -0.17
PRDM16-201ENST00000270722 INTUQ9ULD6 942 aa13.97□□□□□ -0.17
PRDM16-201ENST00000270722 RP1L1Q8IWN7 2480 aaPredicted RBP13.97□□□□□ -0.17
PRDM16-201ENST00000270722 ARHGAP31Q2M1Z3 1444 aa13.96□□□□□ -0.17
PRDM16-201ENST00000270722 ZBTB7BO15156 539 aaPredicted RBP13.96□□□□□ -0.17
PRDM16-201ENST00000270722 PRLP01236 227 aa13.96□□□□□ -0.17
PRDM16-201ENST00000270722 THAP9Q9H5L6 903 aa13.96□□□□□ -0.17
PRDM16-201ENST00000270722 RWDD2AQ9UIY3 292 aa13.96□□□□□ -0.17
PRDM16-201ENST00000270722 CLRN2A0PK11 232 aa13.96□□□□□ -0.17
PRDM16-201ENST00000270722 KCNA1Q09470 495 aa13.96□□□□□ -0.17
PRDM16-201ENST00000270722 XXYLT1Q8NBI6 393 aa13.96□□□□□ -0.17
PRDM16-201ENST00000270722 SDR42E1Q8WUS8 393 aa13.96□□□□□ -0.17
PRDM16-201ENST00000270722 KRT35Q92764 455 aa13.96□□□□□ -0.17
PRDM16-201ENST00000270722 PLEKHA8Q96JA3 519 aa13.96□□□□□ -0.17
PRDM16-201ENST00000270722 TINF2Q9BSI4 451 aa13.96□□□□□ -0.17
PRDM16-201ENST00000270722 PPP2R2CQ9Y2T4 447 aa13.96□□□□□ -0.17
PRDM16-201ENST00000270722 CTNND1O60716 968 aaKnown RBP13.96□□□□□ -0.17
PRDM16-201ENST00000270722 PHKG2P15735 406 aa13.96□□□□□ -0.17
PRDM16-201ENST00000270722 KCNA3P22001 575 aa13.96□□□□□ -0.17
PRDM16-201ENST00000270722 SESN2P58004 480 aaPredicted RBP13.96□□□□□ -0.17
PRDM16-201ENST00000270722 ZBED6P86452 979 aa13.96□□□□□ -0.17
PRDM16-201ENST00000270722 TP53BP2Q13625 1128 aa13.96□□□□□ -0.17
PRDM16-201ENST00000270722 TSEN34Q9BSV6 310 aaKnown RBP13.96□□□□□ -0.17
PRDM16-201ENST00000270722 RHOBTB2Q9BYZ6 727 aa13.96□□□□□ -0.17
PRDM16-201ENST00000270722 PKD2L2Q9NZM6 624 aa13.96□□□□□ -0.17
PRDM16-201ENST00000270722 ADAM22Q9P0K1 906 aa13.96□□□□□ -0.17
PRDM16-201ENST00000270722 FGAP02671 866 aa13.96□□□□□ -0.17
PRDM16-201ENST00000270722 VCLP18206 1134 aa13.96□□□□□ -0.17
PRDM16-201ENST00000270722 JAK1P23458 1154 aa13.96□□□□□ -0.17
PRDM16-201ENST00000270722 UBN2Q6ZU65 1347 aa13.96□□□□□ -0.17
PRDM16-201ENST00000270722 GYG2O15488 501 aa13.96□□□□□ -0.17
PRDM16-201ENST00000270722 PDE9AO76083 593 aa13.96□□□□□ -0.17
PRDM16-201ENST00000270722 BAIAP3O94812 1187 aa13.96□□□□□ -0.17
PRDM16-201ENST00000270722 EFTUD2Q15029 972 aaKnown RBP eCLIP13.96□□□□□ -0.17
PRDM16-201ENST00000270722 HSPH1Q92598 858 aa13.96□□□□□ -0.17
PRDM16-201ENST00000270722 GPKOWQ92917 476 aaPredicted RBP eCLIP13.96□□□□□ -0.17
PRDM16-201ENST00000270722 EMILIN3Q9NT22 766 aa13.96□□□□□ -0.17
PRDM16-201ENST00000270722 INPP5FQ9Y2H2 1132 aa13.96□□□□□ -0.17
PRDM16-201ENST00000270722 FAM9CQ8IZT9 166 aa13.96□□□□□ -0.18
PRDM16-201ENST00000270722 FAM192AQ9GZU8 254 aa13.96□□□□□ -0.18
PRDM16-201ENST00000270722 SYNDIG1Q9H7V2 258 aa13.96□□□□□ -0.18
PRDM16-201ENST00000270722 DDHD2O94830 711 aa13.96□□□□□ -0.18
PRDM16-201ENST00000270722 RGS2P41220 211 aa13.96□□□□□ -0.18
PRDM16-201ENST00000270722 HSPA13P48723 471 aa13.96□□□□□ -0.18
PRDM16-201ENST00000270722 SKP1P63208 163 aa13.96□□□□□ -0.18
PRDM16-201ENST00000270722 SREBF2Q12772 1141 aa13.96□□□□□ -0.18
PRDM16-201ENST00000270722 BBS7Q8IWZ6 715 aa13.96□□□□□ -0.18
PRDM16-201ENST00000270722 TOMM70O94826 608 aa13.95□□□□□ -0.18
PRDM16-201ENST00000270722 IER5Q5VY09 327 aa13.95□□□□□ -0.18
PRDM16-201ENST00000270722 TRIM69Q86WT6 500 aa13.95□□□□□ -0.18
PRDM16-201ENST00000270722 LIMA1Q9UHB6 759 aaKnown RBP13.95□□□□□ -0.18
PRDM16-201ENST00000270722 HERC5Q9UII4 1024 aaKnown RBP13.95□□□□□ -0.18
PRDM16-201ENST00000270722 NSUN2Q08J23 767 aaKnown RBP eCLIP13.95□□□□□ -0.18
PRDM16-201ENST00000270722 SLC27A3Q5K4L6 730 aa13.95□□□□□ -0.18
PRDM16-201ENST00000270722 NAIF1Q69YI7 327 aaPredicted RBP13.95□□□□□ -0.18
PRDM16-201ENST00000270722 RCSD1Q6JBY9 416 aa13.95□□□□□ -0.18
PRDM16-201ENST00000270722 EPS8L2Q9H6S3 715 aa13.95□□□□□ -0.18
PRDM16-201ENST00000270722 NFKBIL1Q9UBC1 381 aaPredicted RBP13.95□□□□□ -0.18
PRDM16-201ENST00000270722 CDC23Q9UJX2 597 aa13.95□□□□□ -0.18
PRDM16-201ENST00000270722 CFAP43Q8NDM7 1665 aa13.95□□□□□ -0.18
PRDM16-201ENST00000270722 ADKP55263 362 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms