RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 GNA14O95837 355 aa26.86■■□□□ 1.89
SSBP4-201ENST00000270061 HOXD13P35453 343 aa26.86■■□□□ 1.89
SSBP4-201ENST00000270061 RFC5P40937 340 aa26.86■■□□□ 1.89
SSBP4-201ENST00000270061 PTPN21Q16825 1174 aa26.86■■□□□ 1.89
SSBP4-201ENST00000270061 STXBP4Q6ZWJ1 553 aa26.86■■□□□ 1.89
SSBP4-201ENST00000270061 ZNF720Q7Z2F6 126 aa26.86■■□□□ 1.89
SSBP4-201ENST00000270061 ZNF689Q96CS4 500 aaPredicted RBP26.86■■□□□ 1.89
SSBP4-201ENST00000270061 CCDC43Q96MW1 224 aaKnown RBP26.86■■□□□ 1.89
SSBP4-201ENST00000270061 GCOM2Q9BZD3 368 aaPredicted RBP26.86■■□□□ 1.89
SSBP4-201ENST00000270061 RNF216Q9NWF9 866 aaPredicted RBP26.86■■□□□ 1.89
SSBP4-201ENST00000270061 SKILP12757 684 aa26.85■■□□□ 1.89
SSBP4-201ENST00000270061 IBSPP21815 317 aaPredicted RBP26.85■■□□□ 1.89
SSBP4-201ENST00000270061 MTIF2P46199 727 aaKnown RBP26.85■■□□□ 1.89
SSBP4-201ENST00000270061 EPC2Q52LR7 807 aa26.85■■□□□ 1.89
SSBP4-201ENST00000270061 SLC24A5Q71RS6 500 aa26.85■■□□□ 1.89
SSBP4-201ENST00000270061 FAM178BQ8IXR5 827 aa26.85■■□□□ 1.89
SSBP4-201ENST00000270061 POLD4Q9HCU8 107 aa26.85■■□□□ 1.89
SSBP4-201ENST00000270061 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP26.85■■□□□ 1.89
SSBP4-201ENST00000270061 PRPF6O94906 941 aaKnown RBP26.84■■□□□ 1.89
SSBP4-201ENST00000270061 UBXN1Q04323 297 aa26.84■■□□□ 1.89
SSBP4-201ENST00000270061 BTG3Q14201 252 aaPredicted RBP26.84■■□□□ 1.89
SSBP4-201ENST00000270061 ZNF410Q86VK4 478 aa26.84■■□□□ 1.89
SSBP4-201ENST00000270061 CCDC112Q8NEF3 446 aa26.84■■□□□ 1.89
SSBP4-201ENST00000270061 STRA6Q9BX79 667 aa26.84■■□□□ 1.89
SSBP4-201ENST00000270061 TYW1Q9NV66 732 aaKnown RBP26.84■■□□□ 1.89
SSBP4-201ENST00000270061 LARSQ9P2J5 1176 aaKnown RBP26.84■■□□□ 1.89
SSBP4-201ENST00000270061 PCDHB7Q9Y5E2 793 aa26.84■■□□□ 1.89
SSBP4-201ENST00000270061 MYH11P35749 1972 aa26.84■■□□□ 1.89
SSBP4-201ENST00000270061 A0A087WZ62 844 aa26.84■■□□□ 1.89
SSBP4-201ENST00000270061 NRDCO43847 1150 aa26.84■■□□□ 1.89
SSBP4-201ENST00000270061 CALUO43852 315 aaPredicted RBP26.84■■□□□ 1.89
SSBP4-201ENST00000270061 PRKCSHP14314 528 aaPredicted RBP26.84■■□□□ 1.89
SSBP4-201ENST00000270061 ZSCAN20P17040 1043 aaPredicted RBP26.84■■□□□ 1.89
SSBP4-201ENST00000270061 MARSP56192 900 aaKnown RBP26.84■■□□□ 1.89
SSBP4-201ENST00000270061 TMEM192Q8IY95 271 aa26.84■■□□□ 1.89
SSBP4-201ENST00000270061 EEF2KMTQ96G04 330 aa26.84■■□□□ 1.89
SSBP4-201ENST00000270061 FDXACB1Q9BRP7 624 aaPredicted RBP26.84■■□□□ 1.89
SSBP4-201ENST00000270061 PCDHB13Q9Y5F0 798 aa26.84■■□□□ 1.89
SSBP4-201ENST00000270061 KIAA1671Q9BY89 1806 aa26.83■■□□□ 1.89
SSBP4-201ENST00000270061 MYO7AQ13402 2215 aa26.83■■□□□ 1.89
SSBP4-201ENST00000270061 C9IYK1 514 aa26.83■■□□□ 1.89
SSBP4-201ENST00000270061 GAS2O43903 313 aaKnown RBP26.83■■□□□ 1.89
SSBP4-201ENST00000270061 TRIM14Q14142 442 aa26.83■■□□□ 1.89
SSBP4-201ENST00000270061 NFIL3Q16649 462 aa26.83■■□□□ 1.89
SSBP4-201ENST00000270061 MIIPQ5JXC2 388 aa26.83■■□□□ 1.89
SSBP4-201ENST00000270061 DRC1Q96MC2 740 aa26.83■■□□□ 1.89
SSBP4-201ENST00000270061 NLRP4Q96MN2 994 aa26.83■■□□□ 1.89
SSBP4-201ENST00000270061 USO1O60763 962 aaKnown RBP26.82■■□□□ 1.88
SSBP4-201ENST00000270061 PLS3P13797 630 aa26.82■■□□□ 1.88
SSBP4-201ENST00000270061 NMT1P30419 496 aaKnown RBP26.82■■□□□ 1.88
SSBP4-201ENST00000270061 ALCAMQ13740 583 aa26.82■■□□□ 1.88
SSBP4-201ENST00000270061 DSC3Q14574 896 aa26.82■■□□□ 1.88
SSBP4-201ENST00000270061 EMC2Q15006 297 aa26.82■■□□□ 1.88
SSBP4-201ENST00000270061 MAN2A1Q16706 1144 aa26.82■■□□□ 1.88
SSBP4-201ENST00000270061 KSR1Q8IVT5 923 aa26.82■■□□□ 1.88
SSBP4-201ENST00000270061 TC2NQ8N9U0 490 aa26.82■■□□□ 1.88
SSBP4-201ENST00000270061 PSPC1Q8WXF1 523 aaKnown RBP26.82■■□□□ 1.88
SSBP4-201ENST00000270061 TMEM143Q96AN5 459 aa26.82■■□□□ 1.88
SSBP4-201ENST00000270061 INO80BQ9C086 356 aaPredicted RBP26.82■■□□□ 1.88
SSBP4-201ENST00000270061 SPTLC3Q9NUV7 552 aa26.82■■□□□ 1.88
SSBP4-201ENST00000270061 LMCD1Q9NZU5 365 aa26.82■■□□□ 1.88
SSBP4-201ENST00000270061 RWDD3Q9Y3V2 267 aa26.82■■□□□ 1.88
SSBP4-201ENST00000270061 BRWD1Q9NSI6 2320 aa26.82■■□□□ 1.88
SSBP4-201ENST00000270061 CUL9Q8IWT3 2517 aa26.82■■□□□ 1.88
SSBP4-201ENST00000270061 CETN3O15182 167 aa26.81■■□□□ 1.88
SSBP4-201ENST00000270061 CSDE1O75534 798 aaKnown RBP26.81■■□□□ 1.88
SSBP4-201ENST00000270061 PPP1R37O75864 691 aa26.81■■□□□ 1.88
SSBP4-201ENST00000270061 ADAM9Q13443 819 aa26.81■■□□□ 1.88
SSBP4-201ENST00000270061 NOLC1Q14978 699 aaKnown RBP eCLIP26.81■■□□□ 1.88
SSBP4-201ENST00000270061 PPFIBP1Q86W92 1011 aa26.81■■□□□ 1.88
SSBP4-201ENST00000270061 CMTR2Q8IYT2 770 aaKnown RBP26.81■■□□□ 1.88
SSBP4-201ENST00000270061 TCP11Q8WWU5 503 aa26.81■■□□□ 1.88
SSBP4-201ENST00000270061 FGFR4P22455 802 aa26.81■■□□□ 1.88
SSBP4-201ENST00000270061 VWA3BQ502W6 1294 aa26.81■■□□□ 1.88
SSBP4-201ENST00000270061 PRPF31Q8WWY3 499 aaKnown RBP26.81■■□□□ 1.88
SSBP4-201ENST00000270061 CLP1Q92989 425 aaKnown RBP26.81■■□□□ 1.88
SSBP4-201ENST00000270061 ST6GALNAC4Q9H4F1 302 aa26.81■■□□□ 1.88
SSBP4-201ENST00000270061 AKR1B15C9JRZ8 316 aaPredicted RBP26.8■■□□□ 1.88
SSBP4-201ENST00000270061 CTNNB1P35222 781 aa26.8■■□□□ 1.88
SSBP4-201ENST00000270061 ERGIC2Q96RQ1 377 aa26.8■■□□□ 1.88
SSBP4-201ENST00000270061 RPL13P26373 211 aaKnown RBP26.79■■□□□ 1.88
SSBP4-201ENST00000270061 PAN2Q504Q3 1202 aaKnown RBP26.79■■□□□ 1.88
SSBP4-201ENST00000270061 PRDM6Q9NQX0 595 aa26.79■■□□□ 1.88
SSBP4-201ENST00000270061 TMEM161AQ9NX61 479 aa26.79■■□□□ 1.88
SSBP4-201ENST00000270061 H3BNC9 293 aa26.79■■□□□ 1.88
SSBP4-201ENST00000270061 TGFB1I1O43294 461 aa26.79■■□□□ 1.88
SSBP4-201ENST00000270061 DGAT1O75907 488 aa26.79■■□□□ 1.88
SSBP4-201ENST00000270061 LINC00271P0C7V0 271 aa26.79■■□□□ 1.88
SSBP4-201ENST00000270061 FAM189BP81408 668 aa26.79■■□□□ 1.88
SSBP4-201ENST00000270061 GPM6BQ13491 265 aa26.79■■□□□ 1.88
SSBP4-201ENST00000270061 PANX2Q96RD6 677 aa26.79■■□□□ 1.88
SSBP4-201ENST00000270061 NDST4Q9H3R1 872 aa26.79■■□□□ 1.88
SSBP4-201ENST00000270061 ELAC1Q9H777 363 aaKnown RBP26.79■■□□□ 1.88
SSBP4-201ENST00000270061 C17orf75Q9HAS0 396 aa26.79■■□□□ 1.88
SSBP4-201ENST00000270061 ATP6V0A4Q9HBG4 840 aa26.79■■□□□ 1.88
SSBP4-201ENST00000270061 IFT122Q9HBG6 1241 aa26.79■■□□□ 1.88
SSBP4-201ENST00000270061 KCND1Q9NSA2 647 aa26.79■■□□□ 1.88
SSBP4-201ENST00000270061 ZMYM2Q9UBW7 1377 aa26.78■■□□□ 1.88
SSBP4-201ENST00000270061 TPM1P09493 284 aa26.78■■□□□ 1.88
SSBP4-201ENST00000270061 NR2F2P24468 414 aa26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms