RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 DRAP1Q14919 205 aaPredicted RBP17.73■□□□□ 0.43
TPM1-201ENST00000267996 KIF18AQ8NI77 898 aa17.73■□□□□ 0.43
TPM1-201ENST00000267996 PDE11AQ9HCR9 933 aa17.73■□□□□ 0.43
TPM1-201ENST00000267996 R3HCC1Q9Y3T6 440 aaKnown RBP17.73■□□□□ 0.43
TPM1-201ENST00000267996 PAXBP1Q9Y5B6 917 aa17.73■□□□□ 0.43
TPM1-201ENST00000267996 AKR1B10O60218 316 aa17.72■□□□□ 0.43
TPM1-201ENST00000267996 LRRN2O75325 713 aa17.72■□□□□ 0.43
TPM1-201ENST00000267996 IPO7O95373 1038 aaKnown RBP17.72■□□□□ 0.43
TPM1-201ENST00000267996 C4BPAP04003 597 aaKnown RBP17.72■□□□□ 0.43
TPM1-201ENST00000267996 FERP16591 822 aa17.72■□□□□ 0.43
TPM1-201ENST00000267996 ANXA13P27216 316 aa17.72■□□□□ 0.43
TPM1-201ENST00000267996 SOX5P35711 763 aa17.72■□□□□ 0.43
TPM1-201ENST00000267996 CACNB2Q08289 660 aaPredicted RBP17.72■□□□□ 0.43
TPM1-201ENST00000267996 KLHL30Q0D2K2 578 aa17.72■□□□□ 0.43
TPM1-201ENST00000267996 ZACNQ401N2 412 aa17.72■□□□□ 0.43
TPM1-201ENST00000267996 EEF1DP3Q658K8 133 aa17.72■□□□□ 0.43
TPM1-201ENST00000267996 SYT10Q6XYQ8 523 aa17.72■□□□□ 0.43
TPM1-201ENST00000267996 SRGAP1Q7Z6B7 1085 aa17.72■□□□□ 0.43
TPM1-201ENST00000267996 FMNL3Q8IVF7 1028 aa17.72■□□□□ 0.43
TPM1-201ENST00000267996 FBXL13Q8NEE6 735 aa17.72■□□□□ 0.43
TPM1-201ENST00000267996 TAS1R2Q8TE23 839 aa17.72■□□□□ 0.43
TPM1-201ENST00000267996 FNBP1Q96RU3 617 aa17.72■□□□□ 0.43
TPM1-201ENST00000267996 CGRRF1Q99675 332 aa17.72■□□□□ 0.43
TPM1-201ENST00000267996 TCHPQ9BT92 498 aa17.72■□□□□ 0.43
TPM1-201ENST00000267996 ADAMTS10Q9H324 1103 aa17.72■□□□□ 0.43
TPM1-201ENST00000267996 LZTFL1Q9NQ48 299 aa17.72■□□□□ 0.43
TPM1-201ENST00000267996 RAB20Q9NX57 234 aa17.72■□□□□ 0.43
TPM1-201ENST00000267996 SRRDQ9UH36 339 aa17.72■□□□□ 0.43
TPM1-201ENST00000267996 CPSF3Q9UKF6 684 aaKnown RBP17.72■□□□□ 0.43
TPM1-201ENST00000267996 MYADML2A6NDP7 307 aa17.71■□□□□ 0.43
TPM1-201ENST00000267996 TRPA1O75762 1119 aa17.71■□□□□ 0.43
TPM1-201ENST00000267996 TRIM32Q13049 653 aa17.71■□□□□ 0.43
TPM1-201ENST00000267996 SPA17Q15506 151 aa17.71■□□□□ 0.43
TPM1-201ENST00000267996 TDRD12Q587J7 1177 aaKnown RBP17.71■□□□□ 0.43
TPM1-201ENST00000267996 ZBTB33Q86T24 672 aa17.71■□□□□ 0.43
TPM1-201ENST00000267996 GPIHBP1Q8IV16 184 aa17.71■□□□□ 0.43
TPM1-201ENST00000267996 ARHGEF19Q8IW93 802 aa17.71■□□□□ 0.43
TPM1-201ENST00000267996 DEF6Q9H4E7 631 aa17.71■□□□□ 0.43
TPM1-201ENST00000267996 HAUS4Q9H6D7 363 aa17.71■□□□□ 0.43
TPM1-201ENST00000267996 FANCGO15287 622 aa17.71■□□□□ 0.42
TPM1-201ENST00000267996 ZC3H11AO75152 810 aaKnown RBP eCLIP17.71■□□□□ 0.42
TPM1-201ENST00000267996 ABL1P00519 1130 aa17.71■□□□□ 0.42
TPM1-201ENST00000267996 VAV2P52735 878 aa17.71■□□□□ 0.42
TPM1-201ENST00000267996 TERF1P54274 439 aa17.71■□□□□ 0.42
TPM1-201ENST00000267996 CYP27A1Q02318 531 aa17.71■□□□□ 0.42
TPM1-201ENST00000267996 ZNF568Q3ZCX4 644 aa17.71■□□□□ 0.42
TPM1-201ENST00000267996 ARHGAP29Q52LW3 1261 aa17.71■□□□□ 0.42
TPM1-201ENST00000267996 CDT1Q9H211 546 aa17.71■□□□□ 0.42
TPM1-201ENST00000267996 UBE2TQ9NPD8 197 aaPredicted RBP17.71■□□□□ 0.42
TPM1-201ENST00000267996 PCDHA13Q9Y5I0 950 aa17.71■□□□□ 0.42
TPM1-201ENST00000267996 PTPRJQ12913 1337 aa17.7■□□□□ 0.42
TPM1-201ENST00000267996 SCN10AQ9Y5Y9 1956 aa17.7■□□□□ 0.42
TPM1-201ENST00000267996 RCCD1A6NED2 376 aa17.7■□□□□ 0.42
TPM1-201ENST00000267996 GPR32O75388 356 aa17.7■□□□□ 0.42
TPM1-201ENST00000267996 C6orf222P0C671 652 aaPredicted RBP17.7■□□□□ 0.42
TPM1-201ENST00000267996 CYP2C9P11712 490 aa17.7■□□□□ 0.42
TPM1-201ENST00000267996 HARSP12081 509 aaKnown RBP17.7■□□□□ 0.42
TPM1-201ENST00000267996 HOXD10P28358 340 aa17.7■□□□□ 0.42
TPM1-201ENST00000267996 TNFSF9P41273 254 aa17.7■□□□□ 0.42
TPM1-201ENST00000267996 VEGFBP49765 207 aa17.7■□□□□ 0.42
TPM1-201ENST00000267996 GNG11P61952 73 aa17.7■□□□□ 0.42
TPM1-201ENST00000267996 POU5F1Q01860 360 aaKnown RBP17.7■□□□□ 0.42
TPM1-201ENST00000267996 ARID5AQ03989 594 aa17.7■□□□□ 0.42
TPM1-201ENST00000267996 PTK2Q05397 1052 aa17.7■□□□□ 0.42
TPM1-201ENST00000267996 SURF1Q15526 300 aa17.7■□□□□ 0.42
TPM1-201ENST00000267996 SLC18A3Q16572 532 aa17.7■□□□□ 0.42
TPM1-201ENST00000267996 SEZ6Q53EL9 994 aa17.7■□□□□ 0.42
TPM1-201ENST00000267996 RUFY4Q6ZNE9 571 aa17.7■□□□□ 0.42
TPM1-201ENST00000267996 ZNF571Q7Z3V5 609 aaPredicted RBP17.7■□□□□ 0.42
TPM1-201ENST00000267996 KIAA1328Q86T90 577 aa17.7■□□□□ 0.42
TPM1-201ENST00000267996 HELQQ8TDG4 1101 aa17.7■□□□□ 0.42
TPM1-201ENST00000267996 NLRP7Q8WX94 980 aa17.7■□□□□ 0.42
TPM1-201ENST00000267996 MTG1Q9BT17 334 aaPredicted RBP17.7■□□□□ 0.42
TPM1-201ENST00000267996 MYO1AQ9UBC5 1043 aa17.7■□□□□ 0.42
TPM1-201ENST00000267996 GPR25O00155 361 aa17.69■□□□□ 0.42
TPM1-201ENST00000267996 EVI5O60447 810 aa17.69■□□□□ 0.42
TPM1-201ENST00000267996 ADAMTS4O75173 837 aa17.69■□□□□ 0.42
TPM1-201ENST00000267996 GFPT2O94808 682 aa17.69■□□□□ 0.42
TPM1-201ENST00000267996 RARBP10826 455 aa17.69■□□□□ 0.42
TPM1-201ENST00000267996 MCF2P10911 925 aa17.69■□□□□ 0.42
TPM1-201ENST00000267996 TNNI1P19237 187 aa17.69■□□□□ 0.42
TPM1-201ENST00000267996 AP3M2P53677 418 aa17.69■□□□□ 0.42
TPM1-201ENST00000267996 GNASQ5JWF2 1037 aa17.69■□□□□ 0.42
TPM1-201ENST00000267996 MAP3K21Q5TCX8 1036 aa17.69■□□□□ 0.42
TPM1-201ENST00000267996 TDRD10Q5VZ19 366 aaKnown RBP17.69■□□□□ 0.42
TPM1-201ENST00000267996 ZNF592Q92610 1267 aa17.69■□□□□ 0.42
TPM1-201ENST00000267996 KREMEN1Q96MU8 473 aa17.69■□□□□ 0.42
TPM1-201ENST00000267996 NT5C1BQ96P26 610 aa17.69■□□□□ 0.42
TPM1-201ENST00000267996 WDR24Q96S15 920 aa17.69■□□□□ 0.42
TPM1-201ENST00000267996 PPP1R16BQ96T49 567 aa17.69■□□□□ 0.42
TPM1-201ENST00000267996 SYT11Q9BT88 431 aa17.69■□□□□ 0.42
TPM1-201ENST00000267996 IRX2Q9BZI1 471 aaPredicted RBP17.69■□□□□ 0.42
TPM1-201ENST00000267996 LACRTQ9GZZ8 138 aa17.69■□□□□ 0.42
TPM1-201ENST00000267996 PDZD7Q9H5P4 517 aa17.69■□□□□ 0.42
TPM1-201ENST00000267996 DNAI1Q9UI46 699 aa17.69■□□□□ 0.42
TPM1-201ENST00000267996 NENFQ9UMX5 172 aa17.69■□□□□ 0.42
TPM1-201ENST00000267996 FOXN3O00409 490 aaPredicted RBP17.68■□□□□ 0.42
TPM1-201ENST00000267996 PJA2O43164 708 aa17.68■□□□□ 0.42
TPM1-201ENST00000267996 KIF5CO60282 957 aa17.68■□□□□ 0.42
TPM1-201ENST00000267996 TSPAN1O60635 241 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms