RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 CHRNA3P32297 505 aa18■□□□□ 0.47
SQLE-201ENST00000265896 ADCY8P40145 1251 aa18■□□□□ 0.47
SQLE-201ENST00000265896 RNASELQ05823 741 aaKnown RBP18■□□□□ 0.47
SQLE-201ENST00000265896 CNGA2Q16280 664 aa18■□□□□ 0.47
SQLE-201ENST00000265896 ATP13A4Q4VNC1 1196 aa18■□□□□ 0.47
SQLE-201ENST00000265896 NRAPQ86VF7 1730 aa18■□□□□ 0.47
SQLE-201ENST00000265896 RHOT2Q8IXI1 618 aa18■□□□□ 0.47
SQLE-201ENST00000265896 NOD2Q9HC29 1040 aa18■□□□□ 0.47
SQLE-201ENST00000265896 TUFT1Q9NNX1 390 aa18■□□□□ 0.47
SQLE-201ENST00000265896 AAASQ9NRG9 546 aa18■□□□□ 0.47
SQLE-201ENST00000265896 GSTTP1A0A1W2PQM5 241 aa17.99■□□□□ 0.47
SQLE-201ENST00000265896 ATP9AO75110 1047 aa17.99■□□□□ 0.47
SQLE-201ENST00000265896 ECEL1O95672 775 aa17.99■□□□□ 0.47
SQLE-201ENST00000265896 EIF3BP55884 814 aaKnown RBP17.99■□□□□ 0.47
SQLE-201ENST00000265896 SEZ6Q53EL9 994 aa17.99■□□□□ 0.47
SQLE-201ENST00000265896 TRPM8Q7Z2W7 1104 aa17.99■□□□□ 0.47
SQLE-201ENST00000265896 XXYLT1Q8NBI6 393 aa17.99■□□□□ 0.47
SQLE-201ENST00000265896 C1orf131Q8NDD1 294 aaKnown RBP17.99■□□□□ 0.47
SQLE-201ENST00000265896 SLC17A8Q8NDX2 589 aa17.99■□□□□ 0.47
SQLE-201ENST00000265896 KCNV2Q8TDN2 545 aa17.99■□□□□ 0.47
SQLE-201ENST00000265896 C10orf88Q9H8K7 445 aa17.99■□□□□ 0.47
SQLE-201ENST00000265896 KIF9Q9HAQ2 790 aa17.99■□□□□ 0.47
SQLE-201ENST00000265896 C5orf60A6NFR6 353 aa17.99■□□□□ 0.47
SQLE-201ENST00000265896 ZSCAN5DPP0CG00 497 aa17.99■□□□□ 0.47
SQLE-201ENST00000265896 CYP11B1P15538 503 aa17.99■□□□□ 0.47
SQLE-201ENST00000265896 CD58P19256 250 aa17.99■□□□□ 0.47
SQLE-201ENST00000265896 ITGA8P53708 1063 aa17.99■□□□□ 0.47
SQLE-201ENST00000265896 CETN1Q12798 172 aa17.99■□□□□ 0.47
SQLE-201ENST00000265896 DHX34Q14147 1143 aaKnown RBP17.99■□□□□ 0.47
SQLE-201ENST00000265896 EP400NLQ6ZTU2 488 aa17.99■□□□□ 0.47
SQLE-201ENST00000265896 GMCL1Q96IK5 515 aa17.99■□□□□ 0.47
SQLE-201ENST00000265896 LARSQ9P2J5 1176 aaKnown RBP17.99■□□□□ 0.47
SQLE-201ENST00000265896 PCDHA3Q9Y5H8 950 aa17.99■□□□□ 0.47
SQLE-201ENST00000265896 COL24A1Q17RW2 1714 aa17.98■□□□□ 0.47
SQLE-201ENST00000265896 PPIP5K2O43314 1243 aa17.98■□□□□ 0.47
SQLE-201ENST00000265896 RRM1P23921 792 aa17.98■□□□□ 0.47
SQLE-201ENST00000265896 ADSSP30520 456 aa17.98■□□□□ 0.47
SQLE-201ENST00000265896 CNOT10Q9H9A5 744 aaKnown RBP17.98■□□□□ 0.47
SQLE-201ENST00000265896 ACTR5Q9H9F9 607 aaPredicted RBP17.98■□□□□ 0.47
SQLE-201ENST00000265896 NOCTQ9UK39 431 aaKnown RBP17.98■□□□□ 0.47
SQLE-201ENST00000265896 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.98■□□□□ 0.47
SQLE-201ENST00000265896 FAM187AA6NFU0 413 aa17.98■□□□□ 0.47
SQLE-201ENST00000265896 TP73O15350 636 aa17.98■□□□□ 0.47
SQLE-201ENST00000265896 THAP12O43422 761 aa17.98■□□□□ 0.47
SQLE-201ENST00000265896 RTN2O75298 545 aa17.98■□□□□ 0.47
SQLE-201ENST00000265896 ATP6V1G2O95670 118 aa17.98■□□□□ 0.47
SQLE-201ENST00000265896 NUDT17P0C025 328 aa17.98■□□□□ 0.47
SQLE-201ENST00000265896 PPP2R5CQ13362 524 aa17.98■□□□□ 0.47
SQLE-201ENST00000265896 SNRNP35Q16560 246 aaKnown RBP17.98■□□□□ 0.47
SQLE-201ENST00000265896 XKR9Q5GH70 373 aa17.98■□□□□ 0.47
SQLE-201ENST00000265896 MTUS1Q9ULD2 1270 aa17.98■□□□□ 0.47
SQLE-201ENST00000265896 CCPG1Q9ULG6 757 aa17.98■□□□□ 0.47
SQLE-201ENST00000265896 TESPA1A2RU30 521 aaPredicted RBP17.97■□□□□ 0.47
SQLE-201ENST00000265896 PAEPP09466 180 aa17.97■□□□□ 0.47
SQLE-201ENST00000265896 HARSP12081 509 aaKnown RBP17.97■□□□□ 0.47
SQLE-201ENST00000265896 ETS1P14921 441 aa17.97■□□□□ 0.47
SQLE-201ENST00000265896 MAPK4P31152 587 aa17.97■□□□□ 0.47
SQLE-201ENST00000265896 SIX1Q15475 284 aaPredicted RBP17.97■□□□□ 0.47
SQLE-201ENST00000265896 STXBP4Q6ZWJ1 553 aa17.97■□□□□ 0.47
SQLE-201ENST00000265896 ANKS1BQ7Z6G8 1248 aa17.97■□□□□ 0.47
SQLE-201ENST00000265896 COL23A1Q86Y22 540 aaPredicted RBP17.97■□□□□ 0.47
SQLE-201ENST00000265896 RMDN2Q96LZ7 410 aa17.97■□□□□ 0.47
SQLE-201ENST00000265896 CEP350Q5VT06 3117 aa17.97■□□□□ 0.47
SQLE-201ENST00000265896 GOLGA8SH3BPF8 625 aa17.97■□□□□ 0.47
SQLE-201ENST00000265896 GOLGA8MH3BSY2 632 aa17.97■□□□□ 0.47
SQLE-201ENST00000265896 BANF1O75531 89 aa17.97■□□□□ 0.47
SQLE-201ENST00000265896 BRAFP15056 766 aa17.97■□□□□ 0.47
SQLE-201ENST00000265896 CTNNA2P26232 953 aa17.97■□□□□ 0.47
SQLE-201ENST00000265896 RARRES1P49788 294 aa17.97■□□□□ 0.47
SQLE-201ENST00000265896 SYCP2LQ5T4T6 812 aa17.97■□□□□ 0.47
SQLE-201ENST00000265896 C6orf118Q5T5N4 469 aa17.97■□□□□ 0.47
SQLE-201ENST00000265896 INTS8Q75QN2 995 aaKnown RBP17.97■□□□□ 0.47
SQLE-201ENST00000265896 EIF1ADQ8N9N8 165 aaKnown RBP17.97■□□□□ 0.47
SQLE-201ENST00000265896 GLIS1Q8NBF1 620 aa17.97■□□□□ 0.47
SQLE-201ENST00000265896 RAVER2Q9HCJ3 691 aaKnown RBP17.97■□□□□ 0.47
SQLE-201ENST00000265896 TCEAL9Q9UHQ7 104 aa17.97■□□□□ 0.47
SQLE-201ENST00000265896 IGF2BP3O00425 579 aaKnown RBP eCLIP17.97■□□□□ 0.47
SQLE-201ENST00000265896 KRT10P13645 584 aa17.97■□□□□ 0.47
SQLE-201ENST00000265896 GBP2P32456 591 aaPredicted RBP17.97■□□□□ 0.47
SQLE-201ENST00000265896 ZNF131P52739 623 aa17.97■□□□□ 0.47
SQLE-201ENST00000265896 RWDD2BP57060 319 aa17.97■□□□□ 0.47
SQLE-201ENST00000265896 NAA25Q14CX7 972 aa17.97■□□□□ 0.47
SQLE-201ENST00000265896 PPP2R5AQ15172 486 aa17.97■□□□□ 0.47
SQLE-201ENST00000265896 GMCL1P1Q8NEA9 526 aa17.97■□□□□ 0.47
SQLE-201ENST00000265896 GJD4Q96KN9 370 aaPredicted RBP17.97■□□□□ 0.47
SQLE-201ENST00000265896 MKNK1Q9BUB5 465 aa17.97■□□□□ 0.47
SQLE-201ENST00000265896 ECT2Q9H8V3 914 aa17.97■□□□□ 0.47
SQLE-201ENST00000265896 PASKQ96RG2 1323 aa17.96■□□□□ 0.47
SQLE-201ENST00000265896 TCF4P15884 667 aa17.96■□□□□ 0.47
SQLE-201ENST00000265896 ADCY2Q08462 1091 aa17.96■□□□□ 0.47
SQLE-201ENST00000265896 CYFIP1Q7L576 1253 aa17.96■□□□□ 0.47
SQLE-201ENST00000265896 PGM2Q96G03 612 aa17.96■□□□□ 0.47
SQLE-201ENST00000265896 C12orf65Q9H3J6 166 aaKnown RBP17.96■□□□□ 0.47
SQLE-201ENST00000265896 ATXN2Q99700 1313 aaKnown RBP17.96■□□□□ 0.47
SQLE-201ENST00000265896 POC1B-GALNT4F8VUJ3 575 aa17.96■□□□□ 0.47
SQLE-201ENST00000265896 RALAP11233 206 aa17.96■□□□□ 0.47
SQLE-201ENST00000265896 ADRA2BP18089 450 aa17.96■□□□□ 0.47
SQLE-201ENST00000265896 YWHABP31946 246 aaKnown RBP17.96■□□□□ 0.47
SQLE-201ENST00000265896 TMED2Q15363 201 aa17.96■□□□□ 0.47
SQLE-201ENST00000265896 C11orf70Q9BRQ4 267 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms