RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 SLC47A2Q86VL8 602 aa12.02□□□□□ -0.49
MSH3-201ENST00000265081 FAM76AQ8TAV0 307 aa12.02□□□□□ -0.49
MSH3-201ENST00000265081 TRPM4Q8TD43 1214 aa12.02□□□□□ -0.49
MSH3-201ENST00000265081 ARL8AQ96BM9 186 aa12.02□□□□□ -0.49
MSH3-201ENST00000265081 EPB41L4BQ9H329 900 aa12.02□□□□□ -0.49
MSH3-201ENST00000265081 TMBIM4Q9HC24 238 aa12.02□□□□□ -0.49
MSH3-201ENST00000265081 PICK1Q9NRD5 415 aa12.02□□□□□ -0.49
MSH3-201ENST00000265081 FAM114A2Q9NRY5 505 aa12.02□□□□□ -0.49
MSH3-201ENST00000265081 HOXC10Q9NYD6 342 aa12.02□□□□□ -0.49
MSH3-201ENST00000265081 GOLGA6CA6NDK9 693 aa12.02□□□□□ -0.49
MSH3-201ENST00000265081 KRIT1O00522 736 aa12.02□□□□□ -0.49
MSH3-201ENST00000265081 GOLGA6DP0CG33 693 aa12.02□□□□□ -0.49
MSH3-201ENST00000265081 ACO1P21399 889 aaKnown RBP12.02□□□□□ -0.49
MSH3-201ENST00000265081 HMGCS2P54868 508 aa12.02□□□□□ -0.49
MSH3-201ENST00000265081 MIS18BP1Q6P0N0 1132 aa12.02□□□□□ -0.49
MSH3-201ENST00000265081 TMC3Q7Z5M5 1100 aa12.02□□□□□ -0.49
MSH3-201ENST00000265081 ZDHHC14Q8IZN3 488 aa12.02□□□□□ -0.49
MSH3-201ENST00000265081 GDAP1L1Q96MZ0 367 aa12.02□□□□□ -0.49
MSH3-201ENST00000265081 PCYT2Q99447 389 aa12.02□□□□□ -0.49
MSH3-201ENST00000265081 GOLGA6AQ9NYA3 693 aa12.02□□□□□ -0.49
MSH3-201ENST00000265081 NR2E1Q9Y466 385 aa12.02□□□□□ -0.49
MSH3-201ENST00000265081 ESYT3A0FGR9 886 aa12.01□□□□□ -0.49
MSH3-201ENST00000265081 USP2O75604 605 aaPredicted RBP12.01□□□□□ -0.49
MSH3-201ENST00000265081 NAMPTP43490 491 aa12.01□□□□□ -0.49
MSH3-201ENST00000265081 HIRAP54198 1017 aaPredicted RBP12.01□□□□□ -0.49
MSH3-201ENST00000265081 PTP4A2Q12974 167 aa12.01□□□□□ -0.49
MSH3-201ENST00000265081 ARHGAP44Q17R89 818 aa12.01□□□□□ -0.49
MSH3-201ENST00000265081 ZACNQ401N2 412 aa12.01□□□□□ -0.49
MSH3-201ENST00000265081 SV2AQ7L0J3 742 aa12.01□□□□□ -0.49
MSH3-201ENST00000265081 RIOX2Q8IUF8 465 aa12.01□□□□□ -0.49
MSH3-201ENST00000265081 CCDC113Q9H0I3 377 aa12.01□□□□□ -0.49
MSH3-201ENST00000265081 ERVK-5Q9HDB9 667 aa12.01□□□□□ -0.49
MSH3-201ENST00000265081 RALGAPA2Q2PPJ7 1873 aa12.01□□□□□ -0.49
MSH3-201ENST00000265081 HSD17B3P37058 310 aa12.01□□□□□ -0.49
MSH3-201ENST00000265081 ANGEL2Q5VTE6 544 aaKnown RBP12.01□□□□□ -0.49
MSH3-201ENST00000265081 ACAD10Q6JQN1 1059 aa12.01□□□□□ -0.49
MSH3-201ENST00000265081 MAEAQ7L5Y9 396 aa12.01□□□□□ -0.49
MSH3-201ENST00000265081 MAATS1Q7Z4T9 603 aa12.01□□□□□ -0.49
MSH3-201ENST00000265081 GPC2Q8N158 579 aa12.01□□□□□ -0.49
MSH3-201ENST00000265081 RDH13Q8NBN7 331 aa12.01□□□□□ -0.49
MSH3-201ENST00000265081 TAS1R2Q8TE23 839 aa12.01□□□□□ -0.49
MSH3-201ENST00000265081 CEP170P1Q96L14 293 aa12.01□□□□□ -0.49
MSH3-201ENST00000265081 CNTNAP2Q9UHC6 1331 aa12.01□□□□□ -0.49
MSH3-201ENST00000265081 CDCA2Q69YH5 1023 aaPredicted RBP12.01□□□□□ -0.49
MSH3-201ENST00000265081 CCDC26Q8TAB7 109 aa12.01□□□□□ -0.49
MSH3-201ENST00000265081 CCDC43Q96MW1 224 aaKnown RBP12.01□□□□□ -0.49
MSH3-201ENST00000265081 KIFC3Q9BVG8 833 aa12.01□□□□□ -0.49
MSH3-201ENST00000265081 PHF2O75151 1096 aa12.01□□□□□ -0.49
MSH3-201ENST00000265081 MMEP08473 750 aa12.01□□□□□ -0.49
MSH3-201ENST00000265081 CAPN2P17655 700 aa12.01□□□□□ -0.49
MSH3-201ENST00000265081 GNPTABQ3T906 1256 aa12.01□□□□□ -0.49
MSH3-201ENST00000265081 NSMFQ6X4W1 530 aa12.01□□□□□ -0.49
MSH3-201ENST00000265081 USP37Q86T82 979 aa12.01□□□□□ -0.49
MSH3-201ENST00000265081 ZNF526Q8TF50 670 aaPredicted RBP12.01□□□□□ -0.49
MSH3-201ENST00000265081 AP1M1Q9BXS5 423 aa12.01□□□□□ -0.49
MSH3-201ENST00000265081 DDX47Q9H0S4 455 aaKnown RBP12.01□□□□□ -0.49
MSH3-201ENST00000265081 CNMDO75829 334 aa12□□□□□ -0.49
MSH3-201ENST00000265081 VNN1O95497 513 aa12□□□□□ -0.49
MSH3-201ENST00000265081 FGGP02679 453 aa12□□□□□ -0.49
MSH3-201ENST00000265081 OATP04181 439 aa12□□□□□ -0.49
MSH3-201ENST00000265081 RFC5P40937 340 aa12□□□□□ -0.49
MSH3-201ENST00000265081 ZNF132P52740 706 aa12□□□□□ -0.49
MSH3-201ENST00000265081 MAP2K1Q02750 393 aaPredicted RBP12□□□□□ -0.49
MSH3-201ENST00000265081 EMC2Q15006 297 aa12□□□□□ -0.49
MSH3-201ENST00000265081 SWSAP1Q6NVH7 229 aa12□□□□□ -0.49
MSH3-201ENST00000265081 ZDHHC24Q6UX98 284 aa12□□□□□ -0.49
MSH3-201ENST00000265081 POLR3FQ9H1D9 316 aaPredicted RBP12□□□□□ -0.49
MSH3-201ENST00000265081 HMGB1P1B2RPK0 211 aaPredicted RBP12□□□□□ -0.49
MSH3-201ENST00000265081 EIF3HO15372 352 aaKnown RBP eCLIP12□□□□□ -0.49
MSH3-201ENST00000265081 IRAK1P51617 712 aa12□□□□□ -0.49
MSH3-201ENST00000265081 ALDH5A1P51649 535 aaPredicted RBP12□□□□□ -0.49
MSH3-201ENST00000265081 WNT7BP56706 349 aa12□□□□□ -0.49
MSH3-201ENST00000265081 CENPCQ03188 943 aa12□□□□□ -0.49
MSH3-201ENST00000265081 SAAL1Q96ER3 474 aa12□□□□□ -0.49
MSH3-201ENST00000265081 RUNDC3BQ96NL0 473 aa12□□□□□ -0.49
MSH3-201ENST00000265081 GRHL1Q9NZI5 618 aa12□□□□□ -0.49
MSH3-201ENST00000265081 ERICH4A6NGS2 130 aa12□□□□□ -0.49
MSH3-201ENST00000265081 CYP26A1O43174 497 aa12□□□□□ -0.49
MSH3-201ENST00000265081 PPFIA4O75335 1185 aa12□□□□□ -0.49
MSH3-201ENST00000265081 NUDT17P0C025 328 aa12□□□□□ -0.49
MSH3-201ENST00000265081 MYBL1P10243 752 aa12□□□□□ -0.49
MSH3-201ENST00000265081 GLRA2P23416 452 aa12□□□□□ -0.49
MSH3-201ENST00000265081 KLHL7Q8IXQ5 586 aa12□□□□□ -0.49
MSH3-201ENST00000265081 PRELID2Q8N945 189 aa12□□□□□ -0.49
MSH3-201ENST00000265081 ATP6V1G3Q96LB4 118 aa12□□□□□ -0.49
MSH3-201ENST00000265081 NT5C1BQ96P26 610 aa12□□□□□ -0.49
MSH3-201ENST00000265081 SH2D3AQ9BRG2 576 aa12□□□□□ -0.49
MSH3-201ENST00000265081 TCEAL9Q9UHQ7 104 aa12□□□□□ -0.49
MSH3-201ENST00000265081 TRPC6Q9Y210 931 aa12□□□□□ -0.49
MSH3-201ENST00000265081 ABLIM1O14639 778 aa11.99□□□□□ -0.49
MSH3-201ENST00000265081 TTI1O43156 1089 aa11.99□□□□□ -0.49
MSH3-201ENST00000265081 FARP2O94887 1054 aaPredicted RBP11.99□□□□□ -0.49
MSH3-201ENST00000265081 EDN1P05305 212 aa11.99□□□□□ -0.49
MSH3-201ENST00000265081 CHRNA3P32297 505 aa11.99□□□□□ -0.49
MSH3-201ENST00000265081 MTMR3Q13615 1198 aa11.99□□□□□ -0.49
MSH3-201ENST00000265081 TNFAIP8L3Q5GJ75 292 aa11.99□□□□□ -0.49
MSH3-201ENST00000265081 AGBL2Q5U5Z8 902 aa11.99□□□□□ -0.49
MSH3-201ENST00000265081 LRRC45Q96CN5 670 aa11.99□□□□□ -0.49
MSH3-201ENST00000265081 FGD4Q96M96 766 aa11.99□□□□□ -0.49
MSH3-201ENST00000265081 ERP44Q9BS26 406 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms